Accumulating Dobzhansky-Muller incompatibilities: Reconciling theory and data

Evolution

Volumn 58, Issue 6, 2004, Pages 1145-1156

  Welch, John J ^a  

^a UNIVERSITY OF SUSSEX   (United Kingdom)

Author keywords

Dobzhansky Muller incompatibilities; Epistasis; Reproductive isolation; Substitution process

Indexed keywords

DIVERGENCE; EVOLUTION; EVOLUTIONARY THEORY; INCOMPATIBILITY;

EID: 3042626948     PISSN: 00143820     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.0014-3820.2004.tb01695.x     Document Type: Article

References (69)

1. Barraclough, T. G., A. P. Vogler, and P. H. Harvey. 1998. Revealing the factors that promote speciation. Philos. Trans. R. Soc. B 353:241-249.
2. Barton, N. H. 2001. The role of hybridization in evolution. Mol. Ecol. 10:551-568.
3. Bastolla, U., M. Porto, H. E. Roman, and M. Vendruscolo. 2002. Lack of self-averaging in neutral evolution of proteins. Phys. Rev. Lett. 89:208101.
4. Bateson, G. 1909. Heredity and variation in modern lights. Pp. 85-101 in A. C. Seward, ed. Darwin and modern science. Cambridge Univ. Press, Cambridge, U.K.
5. Bromham, L., and D. Penny. 2003. The modern molecular clock. Nat. Rev. Genet. 4:216-224.
6. Cabot, E. L., A. W. Davis, N. A. Johnson, and C. -I. Wu. 1994. Genetics of reproductive isolation in the Drosophila simulans clade: complex epistasis underlying hybrid male sterility. Genetics 137:175-189.
7. Coyne, J. A., and H. A. Orr. 1989. Patterns of speciation in Drosophila. Evolution 43:362-381.
8. _. 1997. "Patterns of speciation" revisited. Evolution 51:295-303.
9. _. 1998. The evolutionary genetics of speciation. Philos. Trans. R. Soc. Lond. B 353:287-305.
10. Coyne, J. A., N. H. Barton, and M. Turelli. 1997. A critique of Sewall Wright's shifting balance theory of evolution. Evolution 51:643-671.
11. _. 2000. Is Wright's shifting balance process important in evolution? Evolution 54:306-317.
12. Davis A. W., E. G. Noonburg, and C-I. Wu. 1994. Evidence for complex genie interactions between conspecific chromosomes underlying hybrid female sterility in the Drosophila simulans clade. Genetics 137:191-199.
13. Dobzhansky, T. G. 1937. Genetics and the origin of species. Columbia Univ. Press, New York.
14. Edmands, S. 2002. Does parental divergence predict reproductive compatibility? Trends Ecol. Evol. 17:520-527.
15. Elena, S. F., and R. E. Lenski. 2001. Epistasis between new mutations and genetic background and a test of genetic canalization. Evolution 55:1746-1752.
16. Fay, J. C., G. J. Wyckoff, and C-I. Wu. 2002. Testing the neutral theory of molecular evolution with genomic data from Drosophila. Nature 415:1024-1026.
17. Fontana, W., P. F. Stadler, E. G. Bornberg-Bauer, T. Griesmacher, I. L. Hofacker, M. Tacker, P. Tarazona, E. D. Weinberger, and P. Schuster. 1993. RNA folding and combinatory landscapes. Phys. Rev. E 47:2083-2099.
18. Gavrilets, S. 1997. Evolution and speciation on holey adaptive landscapes. Trends Ecol. Evol. 12:307-312.
19. _. 1999. A dynamical theory of speciation on holey adaptive landscapes. Am. Nat. 154:1-22.
20. _. 2003. Models of speciation: What have we learned in 40 years? Evolution 57:2197-2215.
21. Gavrilets. S., and J. Gravner 1997. Percolation of the fitness hypercube and the evolution of reproductive isolation. J. Theor. Biol. 184:51-64.
22. Gavrilets, S., and A. Hastings. 1996. Founder effect speciation: a theoretical reassessment. Am. Nat. 147:466-491.
23. Gillespie, J. H. 1984. Molecular evolution over the mutational landscape. Evolution 38:1116-1129.
24. _. 1991. The causes of molecular evolution. Oxford Univ. Press, New York.
25. Goodnight, C. J., and M. J. Wade. 2000. The ongoing synthesis: a reply to Coyne, Barton, and Turelli. Evolution 54:317-324.
26. Innan, H., and W. Stephan. 2001. Selection intensity against deleterious mutations in RNA secondary structures and rate of compensatory nucleotide substitutions. Genetics 159:389-399.
27. Johnson, N. A. 2000. Gene interactions and the origin of species. Pp. 197-212 in J. B. Wolf, E. D. Brodie III, and M. J. Wade, eds. Epistasis and the evolutionary process. Oxford Univ. Press, Oxford, U.K.
28. _. 2002. Sixty years after "Isolating mechanisms, evolution and temperature": Muller's legacy. Genetics 161:939-944.
29. Kimura, M. 1985. The role of compensatory neutral mutations in molecular evolution. J. Genetics 64:7-19.
30. _. 1991. Recent development of the neutral theory viewed from the Wrightian tradition of theoretical population genetics. Proc. Natl. Acad. Sci. USA 88:5969-5973.
31. Kirby, D. A., S. V. Muse, and W. Stephan. 1995. Maintenance of pre-mRNA secondary structure by epistatic selection. Proc. Natl. Acad. Sci. USA 92:9047-9051.
32. Kondrashov, A. S. 2003. Accumulation of Dobzhansky-Muller incompatibilities with a spatially structured population. Evolution 57:151-153.
33. Kondrashov, A. S., S. Sunyaev, and F. A. Kondrashov. 2002. Dobzhansky-Muller incompatibilities in protein evolution. Proc. Natl. Acad. Sci. USA 99:14878-14883.
34. Kondrashov, F. A., and A. S. Kondrashov. 2001. Multidimensional epistasis and the disadvantage of sex. Proc. Natl. Acad. Sci. USA 98:12089-12092.
35. Lande, R. 1979. Effective deme size during long-term evolution estimated from rates of chromosomal rearrangement. Evolution 33:234-251.
36. Lijtmaer, D. A., B. Mahler, and P. L. Tubaro. 2003. Hybridization and postzygotic isolation patterns in pigeons and doves. Evolution 57:1411-1418.
37. Maynard Smith, J. 1978. The evolution of sex. Cambridge Univ. Press, Cambridge, U.K.
38. Muller, H. J. 1942. Isolating mechanisms, evolution and temperature. Biol. Symp. 6:71-125.
39. Nei, M., T. Maruyama, and C.-I. Wu. 1983. Models of evolution of reproductive isolation. Genetics 103:557-579.
40. Nowak, M. A., M. C. Boerlijst, J. Cooke, and J. Maynard Smith. 1997. Evolution of genetic redundancy. Nature 388:167-171.
41. Ohta, T. 1997. Role of random genetic drift in the evolution of interactive systems. J. Mol. Evol. 44:S9-S14.
42. Orr, H. A. 1995. The population genetics of speciation: the evolution of hybrid incompatibilities. Genetics 139:1805-1813.
43. _. 1996. Dobzhansky, Bateson, and the genetics of speciation. Genetics 144:1331-1335.
44. _. 1997. Haldane's rule. A. Rev. Ecol. Syst. 28:195-218.
45. _. 2001. The genetics of species differences. Trends Ecol. Evol. 16:343-350.
46. Orr, H. A., and J. A. Coyne. 1989. The genetics of post-zygotic isolation in the Drosophila virilis group. Genetics 121:527-537.
47. Orr, H. A., and S. Irving. 2001. Complex epistasis and the genetic basis of hybrid sterility in the Drosophila pseudoobscura Bogota - USA hybridization. Genetics 158:1089-1100.
48. Orr, H. A., and L. H. Orr. 1996. Waiting for speciation: the effect of population subdivision on the time to speciation. Evolution 38:1251-1749.
49. Orr, H. A., and M. Turelli. 2001. The evolution of postzygotic isolation: accumulating Dobzhansky-Muller incompatibilities. Evolution 55:1085-1094.
50. Palopoli, M. F., and C.-I Wu. 1994. Genetics of hybrid male sterility between Drosophila sibling species: a complex web of epistasis is revealed in interspecific studies. Genetics 138:329-341.
51. Perez, D. E., and C.-I. Wu. 1995. Further characterization of the Odysseus locus of hybrid sterility in Drosophila: one gene is not enough. Genetics 140:201-206.
52. Perez, D. E., C.-I. Wu, N. A. Johnson, and M.-L. Wu. 1993. Genetics of reproductive isolation in the Drosophila simulons clade: DNA marker-assisted mapping and characterization of a hybrid-male sterility gene, Odysseus (Ods). Genetics 134:261-275.
53. Peters, A. D., and C. M. Lively. 2000. Epistasis and the maintenance of sex. Pp. 99-112 in J. B. Wolf, E. D. Brodie III, and M. J. Wade, eds. Epistasis and the evolutionary process. Oxford Univ. Press, Oxford, U.K.
54. Polymeropoulos, M. H., C. Lavedan, E. Leroy, S. E. Ide, A. Dehejia, A. Dutra. B. Pike, H. Root, J. Rubenstein, R. Boyer, E. S. Stenroos, S. Chandrasekharappa, A. Athanassiadou, T. Papapetropoulos, W. G. Johnson, A. M. Lazzarini, R. C. Duvoisin, G. Di Iorio, L. I. Golbe, and R. L. Nussbaum. 1997. Mutation in the synuclein gene identified in families with parkinson's disease. Science 276:2045-2047.
55. Presgraves, D. C. 2002. Patterns of post-zygotic isolation in Lepidoptera. Evolution 56:1168-1183.
56. 1 post-zygotic incompatibilities in birds. Evolution 56:2083-2089.
57. Rice, W. R., and E. E. Hostert. 1993. Laboratory experiments on speciation: What have we learned in 40 years? Evolution 47:1637-1653.
58. Sasa, M. M., P. T. Chippindale, and N. A. Johnson. 1998. Patterns in postzygotic isolation in frogs. Evolution 52:1811-1820.
59. Schaner, P., N. Richards, A. Wadhwa, I. Aksentijevich, D. Kastner, P. Tucker, and D. Gumucio. 2001. Episodic evolution of pyrin in primates: human mutations recapitulate ancestral amino acid states. Nat. Gen. 27:318-321.
60. Smith, N. G. C., and A. Eyre-Walker. 2002. Adaptive protein evolution in Drosophila. Nature 415:1022-1024.
61. Stephan, W. 1996. The rate of compensatory evolution. Genetics 144:419-426.
62. Sunyaev, S., V. Ramensky, and Bork P. 2000. Towards a structural basis of human non-synonymous single nucleotide polymorphisms. Trends Genet. 16:198-200.
63. Turelli, M., N. H. Barton, and J. A. Coyne. 2001. Theory and speciation. Trends Ecol. Evol. 16:330-343.
64. Ungerer, M. C., C. R. Linder, and L. H. Rieseberg. 2003. Effects of genetic background on response to selection in experimental populations of Arabidopsis thaliana. Genetics 163:277-286.
65. Wade, M. J., and C. J. Goodnight. 1998. The theories of Fisher and Wright in the context of metapopulations: When nature does many small experiments. Evolution 52:1537-1553.
66. Walsh, J. B. 1982. Rate of accumulation of reproductive isolation by chromosome rearrangements. Am. Nat. 120:510-532.
67. Wilf, H. S. 1990. Generatingfunctionology. Academic Press, Boston, MA.
68. Wright, S. 1932. The roles of mutation, inbreeding, crossbreeding and selection in evolution. Proc. 6th Int. Congr. Genet. 1:356-366.
69. Wu, C.-I., and A. T. Beckenbach. 1983. Evidence for extensive genetic differentiation between the sex-ratio and the standard arrangement of Drosophila pseudoobscura and D. persimilis and identification of hybrid sterility factors. Genetics 105:71-86.