-
1
-
-
0023885216
-
Cocaine and other stimulants - Actions, abuse, and treatment
-
(a) Gawin FH, Ellinwood EH Jr. Cocaine and other stimulants-actions, abuse, and treatment. N Eng J Med 1988;318:1173-1182.
-
(1988)
N Eng J Med
, vol.318
, pp. 1173-1182
-
-
Gawin, F.H.1
Ellinwood Jr., E.H.2
-
2
-
-
0031065219
-
Immunotherapy for cocaine addiction
-
(b) Landry DW. Immunotherapy for cocaine addiction. Sci Am 1997;276:42-45.
-
(1997)
Sci Am
, vol.276
, pp. 42-45
-
-
Landry, D.W.1
-
3
-
-
0001384546
-
Chemistry, design, and structure-activity relationship of cocaine antagonists
-
Singh S. Chemistry, design, and structure-activity relationship of cocaine antagonists. Chem Rev 2000;100:925-1024.
-
(2000)
Chem Rev
, vol.100
, pp. 925-1024
-
-
Singh, S.1
-
4
-
-
0030781787
-
Peripheral cocaine-blocking agents: New medications for cocaine dependence - An introduction to immunological and enzymatic approaches to treating cocaine dependence reported by Fox, Gorelick, and Cohen in the immediately succeeding articles (see pages 153-174)
-
Sparenborg S, Vocci F, Zukin S. Peripheral cocaine-blocking agents: new medications for cocaine dependence-an introduction to immunological and enzymatic approaches to treating cocaine dependence reported by Fox, Gorelick, and Cohen in the immediately succeeding articles (see pages 153-174). Drug Alcohol Depend 1997;48:149-151.
-
(1997)
Drug Alcohol Depend
, vol.48
, pp. 149-151
-
-
Sparenborg, S.1
Vocci, F.2
Zukin, S.3
-
5
-
-
0030735986
-
Enhancing cocaine metabolism with butyrylcholinesterase as a treatment strategy
-
Gorelick DA. Enhancing cocaine metabolism with butyrylcholinesterase as a treatment strategy. Drug Alcohol Depen 1997;48:159-165.
-
(1997)
Drug Alcohol Depen
, vol.48
, pp. 159-165
-
-
Gorelick, D.A.1
-
6
-
-
0030441048
-
Metabolism of cocaine and heroin is catalyzed by the same human liver carboxylesterases
-
Kamendulis LM, Brzezinski MR, Pindel EV, Bosron WF, Dean RA. Metabolism of cocaine and heroin is catalyzed by the same human liver carboxylesterases. J Pharmacol Exp Ther 1996;279: 713-717.
-
(1996)
J Pharmacol Exp Ther
, vol.279
, pp. 713-717
-
-
Kamendulis, L.M.1
Brzezinski, M.R.2
Pindel, E.V.3
Bosron, W.F.4
Dean, R.A.5
-
7
-
-
0030043207
-
Participation of cytochromes P4502B and P4503A in cocaine toxicity in rat hepatocytes
-
Poet TS, McQueen CA, Halpert JR. Participation of cytochromes P4502B and P4503A in cocaine toxicity in rat hepatocytes. Drug Metab Dispos 1996;24:74-80.
-
(1996)
Drug Metab Dispos
, vol.24
, pp. 74-80
-
-
Poet, T.S.1
McQueen, C.A.2
Halpert, J.R.3
-
8
-
-
0345148795
-
Cocaine and alcohol interactions in the rat: Contribution of cocaine metabolites to the pharmacological effects
-
Pan W-J, Hedaya MA. Cocaine and alcohol interactions in the rat: contribution of cocaine metabolites to the pharmacological effects. J Pharm Sci 1999;88:468-476.
-
(1999)
J Pharm Sci
, vol.88
, pp. 468-476
-
-
Pan, W.-J.1
Hedaya, M.A.2
-
9
-
-
0029924913
-
Characterization of the properties of cocaine in blood: Blood clearance, blood to plasma ratio, and plasma protein binding
-
Sukbuntherng J, Martin DK, Pak Y, Mayersohn M. Characterization of the properties of cocaine in blood: blood clearance, blood to plasma ratio, and plasma protein binding. J Pharm Sci 1996;85: 567-571.
-
(1996)
J Pharm Sci
, vol.85
, pp. 567-571
-
-
Sukbuntherng, J.1
Martin, D.K.2
Pak, Y.3
Mayersohn, M.4
-
10
-
-
0031839079
-
The influence of plasma butyrylcholinesterase concentration on the in vitro hydrolysis of cocaine in human plasma
-
Browne SP, Slaughter EA, Couch RA, Rudnic EM, McLean AM. The influence of plasma butyrylcholinesterase concentration on the in vitro hydrolysis of cocaine in human plasma. Biopharmaceutics Drug Disposition 1998;19:309-314.
-
(1998)
Biopharmaceutics Drug Disposition
, vol.19
, pp. 309-314
-
-
Browne, S.P.1
Slaughter, E.A.2
Couch, R.A.3
Rudnic, E.M.4
McLean, A.M.5
-
11
-
-
0029686495
-
Plasma butyrylcholinesterase activity and cocaine half-life differ significantly in rhesus and squirrel monkeys
-
(a) Carmona GN, Baum I, Schindler CW, Goldberg SR, Jufer R. Plasma butyrylcholinesterase activity and cocaine half-life differ significantly in rhesus and squirrel monkeys. Life Sci 1996;59:939-943.
-
(1996)
Life Sci
, vol.59
, pp. 939-943
-
-
Carmona, G.N.1
Baum, I.2
Schindler, C.W.3
Goldberg, S.R.4
Jufer, R.5
-
12
-
-
0031213567
-
Cocaine detoxification by human plasma butyrylcholinesterase
-
(b) Lynch TJ, Mattes CE, Singh A, Bradley RM, Brady RO, Dretchen KL. Cocaine detoxification by human plasma butyrylcholinesterase. Toxicol Appl Pharmacol 1997;145:363-371.
-
(1997)
Toxicol Appl Pharmacol
, vol.145
, pp. 363-371
-
-
Lynch, T.J.1
Mattes, C.E.2
Singh, A.3
Bradley, R.M.4
Brady, R.O.5
Dretchen, K.L.6
-
13
-
-
0031214055
-
Therapeutic use of butyrylcholinesterase for cocaine intoxication
-
Mattes CE, Lynch TJ, Singh A, Bradley RM, Kellaris PA, Brady RO, Dretchen KL. Therapeutic use of butyrylcholinesterase for cocaine intoxication. Toxicol Appl Pharmacol 1997;145:372-380.
-
(1997)
Toxicol Appl Pharmacol
, vol.145
, pp. 372-380
-
-
Mattes, C.E.1
Lynch, T.J.2
Singh, A.3
Bradley, R.M.4
Kellaris, P.A.5
Brady, R.O.6
Dretchen, K.L.7
-
14
-
-
0031897380
-
Butyrylcholinesterase: An enzyme antidote for cocaine intoxication
-
Mattes CE, Belendiuk GW, Lynch TJ, Brady RO, Dretchen KL. Butyrylcholinesterase: an enzyme antidote for cocaine intoxication. Addict Biol 1998;3:171-188.
-
(1998)
Addict Biol
, vol.3
, pp. 171-188
-
-
Mattes, C.E.1
Belendiuk, G.W.2
Lynch, T.J.3
Brady, R.O.4
Dretchen, K.L.5
-
15
-
-
0026034719
-
Activities of the enantiomers of cocaine and some related compounds as substrates and inhibitors of plasma butyrylcholinesterase
-
Gateley SJ. Activities of the enantiomers of cocaine and some related compounds as substrates and inhibitors of plasma butyrylcholinesterase. Biochem Pharmacol 1991;41:1249-1254.
-
(1991)
Biochem Pharmacol
, vol.41
, pp. 1249-1254
-
-
Gateley, S.J.1
-
16
-
-
0025019509
-
Rapid stereoselective hydrolysis of (+)-cocaine in baboon plasma prevents its uptake in the brain - Implications for behavioral-studies
-
Gatley SJ, MacGregor RR, Fowler JS, Wolf AP, Dewey SL, Schlyer DJ. Rapid stereoselective hydrolysis of (+)-cocaine in baboon plasma prevents its uptake in the brain-implications for behavioral-studies. J Neurochem 1990;54:720-723.
-
(1990)
J Neurochem
, vol.54
, pp. 720-723
-
-
Gatley, S.J.1
MacGregor, R.R.2
Fowler, J.S.3
Wolf, A.P.4
Dewey, S.L.5
Schlyer, D.J.6
-
17
-
-
0031043533
-
Role of aspartate 70 and tryptophan 82 in binding of succinyldithiocholine to human butyrylcholinesterase
-
(a) Masson P, Legrand P, Bartels CF, Froment M-T, Schopfer LM, Lockridge O. Role of aspartate 70 and tryptophan 82 in binding of succinyldithiocholine to human butyrylcholinesterase. Biochemistry 1997;36:2266-2277.
-
(1997)
Biochemistry
, vol.36
, pp. 2266-2277
-
-
Masson, P.1
Legrand, P.2
Bartels, C.F.3
Froment, M.-T.4
Schopfer, L.M.5
Lockridge, O.6
-
18
-
-
0032774638
-
Interaction between the peripheral site residues of human butyrylcholinesterase, D70 and Y332, in binding and hydrolysis of substrates
-
(b) Masson P, Xie W, Froment MT, Levitsky V, Fortier PL, Albaret C, Lockridge O. Interaction between the peripheral site residues of human butyrylcholinesterase, D70 and Y332, in binding and hydrolysis of substrates. Biochim Biophys Acta 1999;1433:281-293.
-
(1999)
Biochim Biophys Acta
, vol.1433
, pp. 281-293
-
-
Masson, P.1
Xie, W.2
Froment, M.T.3
Levitsky, V.4
Fortier, P.L.5
Albaret, C.6
Lockridge, O.7
-
19
-
-
0032944436
-
An improved cocaine hydrolase: The A328Y mutant of human butyrylcholinesterase is 4-fold more efficient
-
(c) Xie W, Altamirano CV, Bartels CF, Speirs RJ, Cashman JR, Lockridge O. An improved cocaine hydrolase: the A328Y mutant of human butyrylcholinesterase is 4-fold more efficient. Mol Pharmacol 1999;55:83-91.
-
(1999)
Mol Pharmacol
, vol.55
, pp. 83-91
-
-
Xie, W.1
Altamirano, C.V.2
Bartels, C.F.3
Speirs, R.J.4
Cashman, J.R.5
Lockridge, O.6
-
20
-
-
0036070598
-
Wild-type and A328W mutant human butyrylcholinesterase tetramers expressed in Chinese hamster ovary cells have a 16-hour half-life in the circulation and protect mice from cocaine toxicity
-
(d) Duysen EG, Bartels CF, Lockridge O. Wild-type and A328W mutant human butyrylcholinesterase tetramers expressed in Chinese hamster ovary cells have a 16-hour half-life in the circulation and protect mice from cocaine toxicity. J Pharmacol Exp Ther 2002;302:751-758.
-
(2002)
J Pharmacol Exp Ther
, vol.302
, pp. 751-758
-
-
Duysen, E.G.1
Bartels, C.F.2
Lockridge, O.3
-
21
-
-
0036164151
-
Engineering of a monomeric and low-glycosylated form of human butyrylcholinesterase - Expression, purification, characterization and crystallization
-
(e) Nachon F, Nicolet Y, Viguie N, Masson P, Fontecilla-Camps JC, Lockridge O. Engineering of a monomeric and low-glycosylated form of human butyrylcholinesterase-expression, purification, characterization and crystallization. Eur J Biochem 2002;269:630-637.
-
(2002)
Eur J Biochem
, vol.269
, pp. 630-637
-
-
Nachon, F.1
Nicolet, Y.2
Viguie, N.3
Masson, P.4
Fontecilla-Camps, J.C.5
Lockridge, O.6
-
22
-
-
0035280395
-
Theoretical studies of competing reaction pathways and energy barriers for alkaline ester hydrolysis of cocaine
-
(f) Zhan CG, Landry DW. Theoretical studies of competing reaction pathways and energy barriers for alkaline ester hydrolysis of cocaine. J Phys Chem A 2001;105:1296-1301.
-
(2001)
J Phys Chem A
, vol.105
, pp. 1296-1301
-
-
Zhan, C.G.1
Landry, D.W.2
-
23
-
-
0030668820
-
Stereoselective inhibition of human butyrylcholinesterase by phosphonothiolate analogs of (+)- and (-)-cocaine
-
Berkman CE., Underiner GE, Cashman JR. Stereoselective inhibition of human butyrylcholinesterase by phosphonothiolate analogs of (+)- and (-)-cocaine. Biochem Pharmcol 1997;54:1261-1266.
-
(1997)
Biochem Pharmcol
, vol.54
, pp. 1261-1266
-
-
Berkman, C.E.1
Underiner, G.E.2
Cashman, J.R.3
-
24
-
-
0035937713
-
Predicted Michaelis-Menten complexes of cocaine-butyrylcholinesterase - Engineering effective butyrylcholinesterase mutants for cocaine detoxication
-
(a) Sun H, El Yazal J, Lockridge O, Schopfer LM, Brimijoin S, Pang YP. Predicted Michaelis-Menten complexes of cocaine-butyrylcholinesterase- engineering effective butyrylcholinesterase mutants for cocaine detoxication. J Biol Chem 2001;276:9330-9336.
-
(2001)
J Biol Chem
, vol.276
, pp. 9330-9336
-
-
Sun, H.1
El Yazal, J.2
Lockridge, O.3
Schopfer, L.M.4
Brimijoin, S.5
Pang, Y.P.6
-
25
-
-
0036073873
-
Cocaine metabolism accelerated by a re-engineered human butyrylcholinesterase
-
(b) Sun H, Shen ML, Pang YP, Lockridge O, Brimijoin S. Cocaine metabolism accelerated by a re-engineered human butyrylcholinesterase. J Pharmacol Exp Ther 2002;302:710-716.
-
(2002)
J Pharmacol Exp Ther
, vol.302
, pp. 710-716
-
-
Sun, H.1
Shen, M.L.2
Pang, Y.P.3
Lockridge, O.4
Brimijoin, S.5
-
26
-
-
0036077314
-
Re-engineering butyrylcholinesterase as a cocaine hydrolase
-
(c) Sun H, Pang YP, Lockridge O, Brimijoin S. Re-engineering butyrylcholinesterase as a cocaine hydrolase. Mol Pharmacol 2002;62:220-224.
-
(2002)
Mol Pharmacol
, vol.62
, pp. 220-224
-
-
Sun, H.1
Pang, Y.P.2
Lockridge, O.3
Brimijoin, S.4
-
27
-
-
0242669341
-
Fundamental reaction mechanism for cocaine hydrolysis in human butyrylcholinesterase
-
Zhan CG, Zheng F, Landry DW. Fundamental reaction mechanism for cocaine hydrolysis in human butyrylcholinesterase. J Am Chem Soc 2003;125:2462-2474.
-
(2003)
J Am Chem Soc
, vol.125
, pp. 2462-2474
-
-
Zhan, C.G.1
Zheng, F.2
Landry, D.W.3
-
28
-
-
15944420158
-
Molecular dynamics simulation of cocaine binding with human butyrylcholinesterase and its mutants
-
Hamza A, Cho H, Tai H-H, Zhan CG. Molecular dynamics simulation of cocaine binding with human butyrylcholinesterase and its mutants. J Phys Chem B 2005;109:4776-4782.
-
(2005)
J Phys Chem B
, vol.109
, pp. 4776-4782
-
-
Hamza, A.1
Cho, H.2
Tai, H.-H.3
Zhan, C.G.4
-
29
-
-
0037019547
-
Role of the catalytic triad and oxyanion hole in acetylcholinesterase catalysis: An ab initio QM/MM study
-
Zhang Y, Kua J, McCammon JA. Role of the catalytic triad and oxyanion hole in acetylcholinesterase catalysis: an ab initio QM/MM study. J Am Chem Soc 2002;124:10572-10577.
-
(2002)
J Am Chem Soc
, vol.124
, pp. 10572-10577
-
-
Zhang, Y.1
Kua, J.2
McCammon, J.A.3
-
30
-
-
0004195760
-
-
University of California, San Francisco
-
Case DA, Pearlman DA, Caldwell JW, Cheatham TE III, Wang J, Ross WS, Simmerling CL, Darden TA, Merz KM, Stanton RV, Cheng AL, Vincent JJ, Crowley M, Tsui V, Gohlke H, Radmer RJ, Duan Y, Pitera J, Massova I, Seibel GL, Singh UC, Weiner PK, Kollman PA. AMBER 7, University of California, San Francisco, 2002.
-
(2002)
AMBER 7
-
-
Case, D.A.1
Pearlman, D.A.2
Caldwell, J.W.3
Cheatham III, T.E.4
Wang, J.5
Ross, W.S.6
Simmerling, C.L.7
Darden, T.A.8
Merz, K.M.9
Stanton, R.V.10
Cheng, A.L.11
Vincent, J.J.12
Crowley, M.13
Tsui, V.14
Gohlke, H.15
Radmer, R.J.16
Duan, Y.17
Pitera, J.18
Massova, I.19
Seibel, G.L.20
Singh, U.C.21
Weiner, P.K.22
Kollman, P.A.23
more..
-
31
-
-
0142039868
-
Crystal structure of human butyrylcholinesterase and of its complexes with substrate and products
-
Nicolet Y, Lockridge O, Masson P, Fontecilla-Camps JC, Nachon F. Crystal structure of human butyrylcholinesterase and of its complexes with substrate and products. J Biol Chem 2003;278: 41141-41147.
-
(2003)
J Biol Chem
, vol.278
, pp. 41141-41147
-
-
Nicolet, Y.1
Lockridge, O.2
Masson, P.3
Fontecilla-Camps, J.C.4
Nachon, F.5
-
32
-
-
0017411710
-
Protein data bank - Computer-based archival file for macromolecular structures
-
(a) Bernstein FC, Koetzle TF, Williams GJ, Meyer EF, Brice MD, Rodgers JR, Kennard O, Shimanouchi T, Tasumi M. Protein data bank-computer-based archival file for macromolecular structures. J Mol Biol 1977;112:535-542.
-
(1977)
J Mol Biol
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, G.J.3
Meyer, E.F.4
Brice, M.D.5
Rodgers, J.R.6
Kennard, O.7
Shimanouchi, T.8
Tasumi, M.9
-
33
-
-
30344451328
-
-
(b) http://www.rcsb.org/pdb/.
-
-
-
-
34
-
-
0025317502
-
Definition of general topological equivalence in protein structures - A procedure involving comparison of properties and relationships through simulated annealing and dynamic-programming
-
Sali A, Blundell TL. Definition of general topological equivalence in protein structures-a procedure involving comparison of properties and relationships through simulated annealing and dynamic-programming. J Mol Biol 1990;212:403-428.
-
(1990)
J Mol Biol
, vol.212
, pp. 403-428
-
-
Sali, A.1
Blundell, T.L.2
-
35
-
-
0027136282
-
Comparative protein modeling by satisfaction of spatial restraints
-
Sali A, Blundell TL. Comparative protein modeling by satisfaction of spatial restraints. J Mol Biol 1993;234:779-815.
-
(1993)
J Mol Biol
, vol.234
, pp. 779-815
-
-
Sali, A.1
Blundell, T.L.2
-
37
-
-
0042994001
-
Determination of two structural forms of catalytic bridging ligand in zinc-phosphotriesterase by molecular dynamics simulation and quantum chemical calculation
-
(a) Zhan CG, Norberto de Souza O, Rittenhouse R, Ornstein RL. Determination of two structural forms of catalytic bridging ligand in zinc-phosphotriesterase by molecular dynamics simulation and quantum chemical calculation. J Am Chem Soc 1999;121:7279-7282.
-
(1999)
J Am Chem Soc
, vol.121
, pp. 7279-7282
-
-
Zhan, C.G.1
Norberto De Souza, O.2
Rittenhouse, R.3
Ornstein, R.L.4
-
38
-
-
0035819590
-
Mobility of the active site bound paraoxon and sarin in zinc-phosphotriesterase by molecular dynamics simulation and quantum chemical calculation
-
(b) Koca J, Zhan CG, Rittenhouse R, Ornstein RL. Mobility of the active site bound paraoxon and sarin in zinc-phosphotriesterase by molecular dynamics simulation and quantum chemical calculation. J Am Chem Soc 2001;123:817-826.
-
(2001)
J Am Chem Soc
, vol.123
, pp. 817-826
-
-
Koca, J.1
Zhan, C.G.2
Rittenhouse, R.3
Ornstein, R.L.4
-
39
-
-
0037328259
-
Coordination number of zinc ions in the phosphotriesterase active site by molecular dynamics and quantum mechanics
-
(c) Koca J, Zhan CG, Rittenhouse RC, Ornstein RL. Coordination number of zinc ions in the phosphotriesterase active site by molecular dynamics and quantum mechanics. J Comput Chem 2003;24:368-378.
-
(2003)
J Comput Chem
, vol.24
, pp. 368-378
-
-
Koca, J.1
Zhan, C.G.2
Rittenhouse, R.C.3
Ornstein, R.L.4
-
40
-
-
33750587438
-
Molecular-dynamics with coupling to an external bath
-
Berendsen HJC, Postma JPM, van Gunsteren WF, DiNola A, Haak JR, Molecular-dynamics with coupling to an external bath. J Chem Phys 1984;81:3684-3690.
-
(1984)
J Chem Phys
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Van Gunsteren, W.F.3
DiNola, A.4
Haak, J.R.5
-
41
-
-
33646940952
-
Numerical-integration of cartesian equations of motion of a system with constraints - Molecular-dynamics of n-alkanes
-
Ryckaert JP, Ciccotti G, Berendsen HJC. Numerical-integration of cartesian equations of motion of a system with constraints-molecular-dynamics of n-alkanes. J Comp Phys 1977;23:327-341.
-
(1977)
J Comp Phys
, vol.23
, pp. 327-341
-
-
Ryckaert, J.P.1
Ciccotti, G.2
Berendsen, H.J.C.3
-
42
-
-
33846823909
-
Particle mesh Ewald: An N · log(N) method for Ewald sums in large systems
-
Darden TA, Lee H, Pedersen LG. Particle mesh Ewald: an N · log(N) method for Ewald sums in large systems. J Chem Phys 1993;98:10089-10092.
-
(1993)
J Chem Phys
, vol.98
, pp. 10089-10092
-
-
Darden, T.A.1
Lee, H.2
Pedersen, L.G.3
-
43
-
-
0033515394
-
A new ONIOM implementation in Gaussian98. Part I. The calculation of energies, gradients, vibrational frequencies and electric field derivatives
-
Dapprich S, Komaromi I, Byun KS, Morokuma K, Frisch MJ. A new ONIOM implementation in Gaussian98. Part I. The calculation of energies, gradients, vibrational frequencies and electric field derivatives. J Mol Struct (Theochem) 1999;461:1-21.
-
(1999)
J Mol Struct (Theochem)
, vol.461
, pp. 1-21
-
-
Dapprich, S.1
Komaromi, I.2
Byun, K.S.3
Morokuma, K.4
Frisch, M.J.5
-
44
-
-
0141704726
-
-
Gaussian, Inc., Pittsburgh, PA
-
Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, Montgomery Jr. JA, Vreven T, Kudin KN, Burant JC, Millam JM, Iyengar SS, Tomasi J, Barone V, Mennucci B, Cossi M, Scalmani G, Rega N, Petersson GA, Nakatsuji H, Hada M, Ehara M, Toyota K, Fukuda R, Hasegawa J, Ishida M, Nakajima T, Honda Y, Kitao O, Nakai H, Klene M, Li X, Knox JE, Hratchian HP, Cross JB, Adamo C, Jaramillo J, Gomperts R, Stratmann RE, Yazyev O, Austin AJ, Cammi R, Pomelli C, Ochterski JW, Ayala PY, Morokuma K, Voth GA, Salvador P, Dannenberg JJ, Zakrzewski VG, Dapprich S, Daniels AD, Strain MC, Farkas O, Malick DK, Rabuck AD, Raghavachari K, Foresman JB, Ortiz JV, Cui Q, Baboul AG, Clifford S, Cioslowski J, Stefanov BB, Liu G, Liashenko A, Piskorz P, Komaromi I, Martin RL, Fox DJ, Keith T, Al-Laham MA, Peng CY, Nanayakkara A, Challacombe M, Gill PMW, Johnson B, Chen W, Wong MW, Gonzalez C, Pople JA. Gaussian 03, Revision A.1, Gaussian, Inc., Pittsburgh, PA, 2003.
-
(2003)
Gaussian 03, Revision A.1
-
-
Frisch, M.J.1
Trucks, G.W.2
Schlegel, H.B.3
Scuseria, G.E.4
Robb, M.A.5
Cheeseman, J.R.6
Montgomery Jr., J.A.7
Vreven, T.8
Kudin, K.N.9
Burant, J.C.10
Millam, J.M.11
Iyengar, S.S.12
Tomasi, J.13
Barone, V.14
Mennucci, B.15
Cossi, M.16
Scalmani, G.17
Rega, N.18
Petersson, G.A.19
Nakatsuji, H.20
Hada, M.21
Ehara, M.22
Toyota, K.23
Fukuda, R.24
Hasegawa, J.25
Ishida, M.26
Nakajima, T.27
Honda, Y.28
Kitao, O.29
Nakai, H.30
Klene, M.31
Li, X.32
Knox, J.E.33
Hratchian, H.P.34
Cross, J.B.35
Adamo, C.36
Jaramillo, J.37
Gomperts, R.38
Stratmann, R.E.39
Yazyev, O.40
Austin, A.J.41
Cammi, R.42
Pomelli, C.43
Ochterski, J.W.44
Ayala, P.Y.45
Morokuma, K.46
Voth, G.A.47
Salvador, P.48
Dannenberg, J.J.49
Zakrzewski, V.G.50
Dapprich, S.51
Daniels, A.D.52
Strain, M.C.53
Farkas, O.54
Malick, D.K.55
Rabuck, A.D.56
Raghavachari, K.57
Foresman, J.B.58
Ortiz, J.V.59
Cui, Q.60
Baboul, A.G.61
Clifford, S.62
Cioslowski, J.63
Stefanov, B.B.64
Liu, G.65
Liashenko, A.66
Piskorz, P.67
Komaromi, I.68
Martin, R.L.69
Fox, D.J.70
Keith, T.71
Al-Laham, M.A.72
Peng, C.Y.73
Nanayakkara, A.74
Challacombe, M.75
Gill, P.M.W.76
Johnson, B.77
Chen, W.78
Wong, M.W.79
Gonzalez, C.80
Pople, J.A.81
more..
-
45
-
-
0034702677
-
1) state photoisomerization path of a retinal protonated Schiff base
-
1) state photoisomerization path of a retinal protonated Schiff base J Chem Phys 2000;113:2969-2975.
-
(2000)
J Chem Phys
, vol.113
, pp. 2969-2975
-
-
Vreven, T.1
Morokuma, K.2
-
47
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-
30344445039
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-
note
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By using the geometries optimized at the HF/3-21G:Amber level with all of the transition bonds fixed, the total energies of the high-layer obtained from the single-point energy calculations at the B3LYP/6-31+G*: Amber level roughly suggest that the energy barriers associated with TS1, TS2, TS3, and TS4 are 2.8, 14.2, 6.6, and 20.4 kcal/mol, respectively. We emphasize that the energy barriers estimated without fully optimizing the geometries of the transition states are not reliable.
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-
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48
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-
11644261806
-
Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function
-
(a) Morris GM, Goodsell DS, Halliday RS, Huey R, Hart WE, Belew RK, Olson AJ. Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function. J Comput Chem 1998;19:1639-1662.
-
(1998)
J Comput Chem
, vol.19
, pp. 1639-1662
-
-
Morris, G.M.1
Goodsell, D.S.2
Halliday, R.S.3
Huey, R.4
Hart, W.E.5
Belew, R.K.6
Olson, A.J.7
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49
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30344448810
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note
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0 = 1.49 Å, because it is the shortest H...O distance found in all of our MD simulations and geometry optimizations. The ∈ value was determined by using the condition that HBE(r) = -5.0 kcal/mol, when r = 1.90 Å.
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-
50
-
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0034906622
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Analysis of a 10-ns molecular dynamics simulation of mouse acetylcholinesterase
-
Tai K, Shen T, Börjesson U, Philippopoulos M, McCammon JA. Analysis of a 10-ns molecular dynamics simulation of mouse acetylcholinesterase. Biophys J 2001;81:715-724.
-
(2001)
Biophys J
, vol.81
, pp. 715-724
-
-
Tai, K.1
Shen, T.2
Börjesson, U.3
Philippopoulos, M.4
McCammon, J.A.5
-
51
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0345276588
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Studying the roles of W86, E202, and Y337 in binding of acetylcholine to acetylcholinesterase using a combined molecular dynamics and multiple docking approach
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Kua J, Zhang Y, Eslami AC, Butler JR, McCammon JA. Studying the roles of W86, E202, and Y337 in binding of acetylcholine to acetylcholinesterase using a combined molecular dynamics and multiple docking approach. Protein Sci 2003;12:2675-2684.
-
(2003)
Protein Sci
, vol.12
, pp. 2675-2684
-
-
Kua, J.1
Zhang, Y.2
Eslami, A.C.3
Butler, J.R.4
McCammon, J.A.5
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