-
1
-
-
0037439256
-
Excess SeqA prolongs sequestration of oriC and delays nucleoid segregation and cell division
-
Bach, T., Krekling, M.A., and Skarstad, K. 2003. Excess SeqA prolongs sequestration of oriC and delays nucleoid segregation and cell division. EMBO J22:315-323.
-
(2003)
EMBO J
, vol.22
, pp. 315-323
-
-
Bach, T.1
Krekling, M.A.2
Skarstad, K.3
-
2
-
-
0037087587
-
The origin recognition complex: From simple origins to complex functions
-
Bell, S.P. 2002. The origin recognition complex: from simple origins to complex functions. Genes Dev 16:659-672.
-
(2002)
Genes Dev
, vol.16
, pp. 659-672
-
-
Bell, S.P.1
-
3
-
-
0035997368
-
DNA replication in eukaryotic cells
-
Bell, S.P., and Dutta, A. 2002. DNA replication in eukaryotic cells. Annu Rev Biochem 71:333-374.
-
(2002)
Annu Rev Biochem
, vol.71
, pp. 333-374
-
-
Bell, S.P.1
Dutta, A.2
-
4
-
-
0029971163
-
mioCtranscription, initiation of replication, and the eclipse in Escherichia coli
-
Bogan, J.A., and Helmstetter, C.E. 1996. mioCtranscription, initiation of replication, and the eclipse in Escherichia coli. JBacteriol 178:3201-3206.
-
(1996)
J Bacteriol
, vol.178
, pp. 3201-3206
-
-
Bogan, J.A.1
Helmstetter, C.E.2
-
5
-
-
0030669538
-
DNA sequestration and transcription in the oriC region of Escherichia coli
-
Bogan, J.A., and Helmstetter, C.E. 1997. DNA sequestration and transcription in the oriC region of Escherichia coli. Mol Microbiol 26:889-896.
-
(1997)
Mol Microbiol
, vol.26
, pp. 889-896
-
-
Bogan, J.A.1
Helmstetter, C.E.2
-
6
-
-
10944235448
-
ATP hydrolysis by ORC catalyzes reiterative Mcm2-7 assembly at a defined origin of replication
-
Bowers, J.L., Randell, J.C., Chen, S., and Bell, S.P. 2004. ATP hydrolysis by ORC catalyzes reiterative Mcm2-7 assembly at a defined origin of replication. Mol Cell 16:967-978.
-
(2004)
Mol Cell
, vol.16
, pp. 967-978
-
-
Bowers, J.L.1
Randell, J.C.2
Chen, S.3
Bell, S.P.4
-
7
-
-
0025875885
-
The hemimethylated replication origin of Escherichia coli can be initiated in vitro
-
Boye, E. 1991. The hemimethylated replication origin of Escherichia coli can be initiated in vitro. JBacteriol 173:4537-4539.
-
(1991)
J Bacteriol
, vol.173
, pp. 4537-4539
-
-
Boye, E.1
-
8
-
-
0034574441
-
Limiting DNA replication to once and only once
-
Boye, E., Lobner-Olesen, A., and Skarstad, K. 2000. Limiting DNA replication to once and only once. EMBO Rep 1:479-483.
-
(2000)
EMBO Rep
, vol.1
, pp. 479-483
-
-
Boye, E.1
Lobner-Olesen, A.2
Skarstad, K.3
-
9
-
-
0033561299
-
Binding of SeqA protein to DNA requires interaction between two or more complexes bound to separate hemimethylated GATC sequences
-
Brendler, T., and Austin, S. 1999. Binding of SeqA protein to DNA requires interaction between two or more complexes bound to separate hemimethylated GATC sequences. EMBO J 18:2304-2310.
-
(1999)
EMBO J
, vol.18
, pp. 2304-2310
-
-
Brendler, T.1
Austin, S.2
-
10
-
-
0034669195
-
A case for sliding SeqA tracts at anchored replication forks during Escherichia coli chromosome replication and segregation
-
Brendler, T., Sawitzke, J., Sergueev, K., and Austin, S. 2000. A case for sliding SeqA tracts at anchored replication forks during Escherichia coli chromosome replication and segregation. EMBO J 19:6249-6258.
-
(2000)
EMBO J
, vol.19
, pp. 6249-6258
-
-
Brendler, T.1
Sawitzke, J.2
Sergueev, K.3
Austin, S.4
-
11
-
-
0033573089
-
The Escherichia coli trmE (mnmE) gene, involved in tRNA modification, codes for an evolutionarily conserved GTPase with unusual biochemical properties
-
Cabedo, H., Macian, F., Villarroya, M., Escudero, J.C., Martinez-Vicente, M., Knecht, E., and Armengod, M.E. 1999. The Escherichia coli trmE (mnmE) gene, involved in tRNA modification, codes for an evolutionarily conserved GTPase with unusual biochemical properties. EMBO J 18:7063-7076.
-
(1999)
EMBO J
, vol.18
, pp. 7063-7076
-
-
Cabedo, H.1
Macian, F.2
Villarroya, M.3
Escudero, J.C.4
Martinez-Vicente, M.5
Knecht, E.6
Armengod, M.E.7
-
12
-
-
0037628613
-
Controlled initiation of chromosomal replication in Escherichia coli requires functional Hda protein
-
Camara, J.E., Skarstad, K., and Crooke, E. 2003. Controlled initiation of chromosomal replication in Escherichia coli requires functional Hda protein. J Bacteriol 185:3244-3248.
-
(2003)
J Bacteriol
, vol.185
, pp. 3244-3248
-
-
Camara, J.E.1
Skarstad, K.2
Crooke, E.3
-
13
-
-
29744469280
-
Initiation of chromosomal replication
-
Higgins, N. P. ed., Washington, DC: ASM press
-
Camara, J.E., and Crooke, E. 2005. Initiation of chromosomal replication. In: Higgins, N. P. ed., The bacterial Chromosome. Washington, DC: ASM press, pp. 177-191.
-
(2005)
The Bacterial Chromosome
, pp. 177-191
-
-
Camara, J.E.1
Crooke, E.2
-
14
-
-
29744460566
-
Hda inactivation of DnaA is the predominant mechanism preventing hyperinitiation of Escherichia coli DNA replication
-
Camara, J.E., Breier, A.M., Brendler, T., Austin, S., Cozzarelli, N.R., and Crooke, E. 2005. Hda inactivation of DnaA is the predominant mechanism preventing hyperinitiation of Escherichia coli DNA replication. EMBO Rep 6:1-6.
-
(2005)
EMBO Rep
, vol.6
, pp. 1-6
-
-
Camara, J.E.1
Breier, A.M.2
Brendler, T.3
Austin, S.4
Cozzarelli, N.R.5
Crooke, E.6
-
15
-
-
0025071856
-
E coli oriC and the dnaA gene promoter are sequestered from dam methyltransferase following the passage of the chromosomal replication fork
-
Campbell, J.L., and Kleckner, N. 1990. E coli oriC and the dnaA gene promoter are sequestered from dam methyltransferase following the passage of the chromosomal replication fork. Cell 62:967-979.
-
(1990)
Cell
, vol.62
, pp. 967-979
-
-
Campbell, J.L.1
Kleckner, N.2
-
16
-
-
0033563102
-
Assembly of functionally active Drosophila origin recognition complex from recombinant proteins
-
Chesnokov, I., Gossen, M., Remus, D., and Botchan, M. 1999. Assembly of functionally active Drosophila origin recognition complex from recombinant proteins. Genes Dev 13:1289-1296.
-
(1999)
Genes Dev
, vol.13
, pp. 1289-1296
-
-
Chesnokov, I.1
Gossen, M.2
Remus, D.3
Botchan, M.4
-
17
-
-
0024720337
-
Expression of Escherichia coli dnaA and mioC genes as a function of growth rate
-
Chiaramello, A.E., and Zyskind, J.W. 1989. Expression of Escherichia coli dnaA and mioC genes as a function of growth rate. J Bacteriol 171:4272-4280.
-
(1989)
J Bacteriol
, vol.171
, pp. 4272-4280
-
-
Chiaramello, A.E.1
Zyskind, J.W.2
-
18
-
-
0026787446
-
The chromosome origin of Escherichia coli stabilizes DnaA protein during rejuvenation by phospholipids
-
Crooke, E., Castuma, C.E., and Kornberg, A. 1992. The chromosome origin of Escherichia coli stabilizes DnaA protein during rejuvenation by phospholipids. J Biol Chem 267:16779-16782.
-
(1992)
J Biol Chem
, vol.267
, pp. 16779-16782
-
-
Crooke, E.1
Castuma, C.E.2
Kornberg, A.3
-
19
-
-
0021770444
-
Novel E coli mutants deficient in biosynthesis of 5-methylaminomethyl-2- thiouridine
-
Elseviers, D., Petrullo, L.A., and Gallagher, P.J. 1984. Novel E coli mutants deficient in biosynthesis of 5-methylaminomethyl-2-thiouridine. Nucleic Acids Res 12:3521-3534.
-
(1984)
Nucleic Acids Res
, vol.12
, pp. 3521-3534
-
-
Elseviers, D.1
Petrullo, L.A.2
Gallagher, P.J.3
-
20
-
-
0037249352
-
Temporal regulation of topoisomerase IV activity in E coli
-
Espeli, O., Levine, C., Hassing, H., and Marians, K.J. 2003. Temporal regulation of topoisomerase IV activity in E coli. Mol Cell 11:189-201.
-
(2003)
Mol Cell
, vol.11
, pp. 189-201
-
-
Espeli, O.1
Levine, C.2
Hassing, H.3
Marians, K.J.4
-
21
-
-
0024417597
-
Role of the DNA/membrane complex in prokaryotic DNA replication
-
Firshein, W. 1989. Role of the DNA/membrane complex in prokaryotic DNA replication. Annu Rev Microbiol 43:89-120.
-
(1989)
Annu Rev Microbiol
, vol.43
, pp. 89-120
-
-
Firshein, W.1
-
22
-
-
0037238336
-
Lack of SeqA focus formation, specific DNA binding and proper protein multimerization in the Escherichia coli sequestration mutant seqA2
-
Fossum, S, Soreide, S., and Skarstad, K. 2003. Lack of SeqA focus formation, specific DNA binding and proper protein multimerization in the Escherichia coli sequestration mutant seqA2. Mol Microbiol 47:619-632.
-
(2003)
Mol Microbiol
, vol.47
, pp. 619-632
-
-
Fossum, S.1
Soreide, S.2
Skarstad, K.3
-
23
-
-
0037449891
-
Identification of functional domains of the Escherichia coli SeqA protein
-
Fujikawa, N., Kurumizaka, H., Yamazoe, M., Hiraga, S., and Yokoyama, S. 2003. Identification of functional domains of the Escherichia coli SeqA protein. Biochem Biophys Res Commun 300:699-705.
-
(2003)
Biochem Biophys Res Commun
, vol.300
, pp. 699-705
-
-
Fujikawa, N.1
Kurumizaka, H.2
Yamazoe, M.3
Hiraga, S.4
Yokoyama, S.5
-
24
-
-
1242320314
-
Structural and biochemical analyses of hemimethylated DNA binding by the SeqA protein
-
Fujikawa, N., Kurumizaka, H., Nureki, O., Tanaka, Y., Yamazoe, M., Hiraga, S., and Yokoyama, S. 2004. Structural and biochemical analyses of hemimethylated DNA binding by the SeqA protein. Nucleic Acids Res 32:82-92.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 82-92
-
-
Fujikawa, N.1
Kurumizaka, H.2
Nureki, O.3
Tanaka, Y.4
Yamazoe, M.5
Hiraga, S.6
Yokoyama, S.7
-
25
-
-
6044276067
-
Reactivation of DnaA by DNA sequence-specific nucleotide exchange in vitro
-
Fujimitsu, K., and Katayama, T. 2004. Reactivation of DnaA by DNA sequence-specific nucleotide exchange in vitro. Biochem Biophys Res Commun 322:411-419.
-
(2004)
Biochem Biophys Res Commun
, vol.322
, pp. 411-419
-
-
Fujimitsu, K.1
Katayama, T.2
-
26
-
-
0029880647
-
Membrane regulation of the chromosomal replication activity of E coli DnaA requires a discrete site on the protein
-
Garner, J., and Crooke, E. 1996. Membrane regulation of the chromosomal replication activity of E coli DnaA requires a discrete site on the protein. EMBO J 15:3477-3485.
-
(1996)
EMBO J
, vol.15
, pp. 3477-3485
-
-
Garner, J.1
Crooke, E.2
-
27
-
-
0032570678
-
Membrane-mediated release of nucleotide from an initiator of chromosomal replication, Escherichia coli DnaA, occurs with insertion of a distinct region of the protein into the lipid bilayer
-
Garner, J., Durrer, P., Kitchen, J., Brunner, J., and Crooke, E. 1998. Membrane-mediated release of nucleotide from an initiator of chromosomal replication, Escherichia coli DnaA, occurs with insertion of a distinct region of the protein into the lipid bilayer. J Biol Chem 273:5167-5173.
-
(1998)
J Biol Chem
, vol.273
, pp. 5167-5173
-
-
Garner, J.1
Durrer, P.2
Kitchen, J.3
Brunner, J.4
Crooke, E.5
-
28
-
-
3042852862
-
Reconstitution of licensed replication origins on Xenopus sperm nuclei using purified proteins
-
Gillespie, P.J., Li, A., and Blow, J.J. 2001. Reconstitution of licensed replication origins on Xenopus sperm nuclei using purified proteins. BMC Biochem 2:15.
-
(2001)
BMC Biochem
, vol.2
, pp. 15
-
-
Gillespie, P.J.1
Li, A.2
Blow, J.J.3
-
29
-
-
0036830559
-
Insights into negative modulation of E coli replication initiation from the structure of SeqA-hemimethylated DNA complex
-
Guarne, A., Zhao, Q., Ghirlando, R., and Yang, W. 2002. Insights into negative modulation of E coli replication initiation from the structure of SeqA-hemimethylated DNA complex. Nat Struct Biol 9:839-843.
-
(2002)
Nat Struct Biol
, vol.9
, pp. 839-843
-
-
Guarne, A.1
Zhao, Q.2
Ghirlando, R.3
Yang, W.4
-
30
-
-
0041315810
-
Sequential binding of SeqA to paired hemi-methylated GATC sequences mediates formation of higher order complexes
-
Han, JS, Kang, S., Lee, H., Kim, H.K., and Hwang, D.S. 2003. Sequential binding of SeqA to paired hemi-methylated GATC sequences mediates formation of higher order complexes. J Biol Chem 278:34983-34989.
-
(2003)
J Biol Chem
, vol.278
, pp. 34983-34989
-
-
Han, J.S.1
Kang, S.2
Lee, H.3
Kim, H.K.4
Hwang, D.S.5
-
31
-
-
0026322679
-
Initiator (DnaA) protein concentration as a function of growth rate in Escherichia coli and Salmonella typhimurium
-
Hansen, F.G., Atlung, T., Braun, R.E., Wright, A., Hughes, P., and Kohiyama, M. 1991. Initiator (DnaA) protein concentration as a function of growth rate in Escherichia coli and Salmonella typhimurium. J Bacteriol 173:5194-5199.
-
(1991)
J Bacteriol
, vol.173
, pp. 5194-5199
-
-
Hansen, F.G.1
Atlung, T.2
Braun, R.E.3
Wright, A.4
Hughes, P.5
Kohiyama, M.6
-
32
-
-
1542467403
-
Metazoan origin selection: Origin recognition complex chromatin binding is regulated by CDC6 recruitment and ATP hydrolysis
-
Harvey, K.J., and Newport, J. 2003. Metazoan origin selection: origin recognition complex chromatin binding is regulated by CDC6 recruitment and ATP hydrolysis. J Biol Chem 278:48524-48528.
-
(2003)
J Biol Chem
, vol.278
, pp. 48524-48528
-
-
Harvey, K.J.1
Newport, J.2
-
33
-
-
19944431737
-
Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome
-
Hashimoto, M., Ichimura, T., Mizoguchi, H., Tanaka, K., Fujimitsu, K., Keyamura, K., Ote, T., Yamakawa, T., Yamazaki, Y., Mori, H., Katayama, T., and Kato J. 2005. Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome. Mol Microbiol 55:137-149.
-
(2005)
Mol Microbiol
, vol.55
, pp. 137-149
-
-
Hashimoto, M.1
Ichimura, T.2
Mizoguchi, H.3
Tanaka, K.4
Fujimitsu, K.5
Keyamura, K.6
Ote, T.7
Yamakawa, T.8
Yamazaki, Y.9
Mori, H.10
Katayama, T.11
Kato, J.12
-
34
-
-
0031991771
-
Cell cycle-dependent duplication and bidirectional migration of SeqA-associated DNA-protein complexes in E coli
-
Hiraga, S., Ichinose, C., Niki, H., and Yamazoe, M. 1998. Cell cycle-dependent duplication and bidirectional migration of SeqA-associated DNA-protein complexes in E coli. Mol Cell 1:381-387.
-
(1998)
Mol Cell
, vol.1
, pp. 381-387
-
-
Hiraga, S.1
Ichinose, C.2
Niki, H.3
Yamazoe, M.4
-
35
-
-
0034086581
-
Bidirectional migration of SeqA-bound hemimethylated DNA clusters and pairing of oriC copies in Escherichia coli
-
Hiraga, S., Ichinose, C., Onogi, T., Niki, H., and Yamazoe, M. 2000. Bidirectional migration of SeqA-bound hemimethylated DNA clusters and pairing of oriC copies in Escherichia coli. Genes Cells 5:327-341.
-
(2000)
Genes Cells
, vol.5
, pp. 327-341
-
-
Hiraga, S.1
Ichinose, C.2
Onogi, T.3
Niki, H.4
Yamazoe, M.5
-
36
-
-
8544240894
-
DiaA, a novel DnaA-binding protein, ensures the timely initiation of Escherichia coli chromosome replication
-
Ishida, T., Akimitsu, N., Kashioka, T., Hatano, M., Kubota, T., Ogata, Y., Sekimizu, K., and Katayama, T. 2004. DiaA, a novel DnaA-binding protein, ensures the timely initiation of Escherichia coli chromosome replication. J Biol Chem 279:45546-45555.
-
(2004)
J Biol Chem
, vol.279
, pp. 45546-45555
-
-
Ishida, T.1
Akimitsu, N.2
Kashioka, T.3
Hatano, M.4
Kubota, T.5
Ogata, Y.6
Sekimizu, K.7
Katayama, T.8
-
37
-
-
0037415690
-
Wobble modification differences and subcellular localization of tRNAs in Leishmania tarentolae: Implication for tRNA sorting mechanism
-
Kaneko, T., Suzuki, T., Kapushoc, S.T., Rubio, M.A., Ghazvini, J., Watanabe, K., Simpson, L., and Suzuki, T. 2003. Wobble modification differences and subcellular localization of tRNAs in Leishmania tarentolae: implication for tRNA sorting mechanism. EMBO J 22:657-667.
-
(2003)
EMBO J
, vol.22
, pp. 657-667
-
-
Kaneko, T.1
Suzuki, T.2
Kapushoc, S.T.3
Rubio, M.A.4
Ghazvini, J.5
Watanabe, K.6
Simpson, L.7
Suzuki, T.8
-
38
-
-
0025806610
-
Initiation of chromosomal DNA replication which is stimulated without oversupply of DnaA protein in Escherichia coli
-
Katayama, T., and Nagata, T. 1991. Initiation of chromosomal DNA replication which is stimulated without oversupply of DnaA protein in Escherichia coli. Mol Gen Genet 226:491-502.
-
(1991)
Mol Gen Genet
, vol.226
, pp. 491-502
-
-
Katayama, T.1
Nagata, T.2
-
39
-
-
0028240462
-
Hyperactive initiation of chromosomal replication in vivo and in vitro by a mutant initiator protein, DnaAcos, of Escherichia coll
-
Katayama, T., and Kornberg, A. 1994. Hyperactive initiation of chromosomal replication in vivo and in vitro by a mutant initiator protein, DnaAcos, of Escherichia coll. J Biol Chem 269:12698-12703.
-
(1994)
J Biol Chem
, vol.269
, pp. 12698-12703
-
-
Katayama, T.1
Kornberg, A.2
-
40
-
-
0027978134
-
The mutant DnaAcos protein which overinitiates replication of the Escherichia coli chromosome is inert to negative regulation for initiation
-
Katayama, T. 1994. The mutant DnaAcos protein which overinitiates replication of the Escherichia coli chromosome is inert to negative regulation for initiation. J Biol Chem 269:22075-22079.
-
(1994)
J Biol Chem
, vol.269
, pp. 22075-22079
-
-
Katayama, T.1
-
41
-
-
0029609745
-
Characterization of Escherichia coli DnaAcos protein in replication systems reconstituted with highly purified proteins
-
Katayama, T., Crooke, E., and Sekimizu, K. 1995. Characterization of Escherichia coli DnaAcos protein in replication systems reconstituted with highly purified proteins. Mol Microbiol 18:813-820.
-
(1995)
Mol Microbiol
, vol.18
, pp. 813-820
-
-
Katayama, T.1
Crooke, E.2
Sekimizu, K.3
-
42
-
-
0028911699
-
DnaA protein is sensitive to a soluble factor and is specifically inactivated for initiation of in vitro replication of the Escherichia coli minichromosome
-
Katayama, T., and Crooke, E. 1995. DnaA protein is sensitive to a soluble factor and is specifically inactivated for initiation of in vitro replication of the Escherichia coli minichromosome. J Biol Chem 270:9265-9271.
-
(1995)
J Biol Chem
, vol.270
, pp. 9265-9271
-
-
Katayama, T.1
Crooke, E.2
-
43
-
-
0030702851
-
CedA is a novel Escherichia coli protein that activates the cell division inhibited by chromosomal DNA overreplication
-
Katayama, T., Takata, M., and Sekimizu, K. 1997. CedA is a novel Escherichia coli protein that activates the cell division inhibited by chromosomal DNA overreplication. Mol Microbiol 26:687-697.
-
(1997)
Mol Microbiol
, vol.26
, pp. 687-697
-
-
Katayama, T.1
Takata, M.2
Sekimizu, K.3
-
44
-
-
0032504050
-
The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E coli chromosomal replicase
-
Katayama, T., Kubota, T., Kurokawa, K., Crooke, E., and Sekimizu, K. 1998. The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E coli chromosomal replicase. Cell 94:61-71.
-
(1998)
Cell
, vol.94
, pp. 61-71
-
-
Katayama, T.1
Kubota, T.2
Kurokawa, K.3
Crooke, E.4
Sekimizu, K.5
-
45
-
-
0034945190
-
Feedback controls restrain the initiation of Escherichia coli chromosomal replication
-
Katayama, T. 2001. Feedback controls restrain the initiation of Escherichia coli chromosomal replication. Mol Microbiol 41:9-17.
-
(2001)
Mol Microbiol
, vol.41
, pp. 9-17
-
-
Katayama, T.1
-
46
-
-
0035111073
-
Multiple pathways regulating DnaA function in Escherichia coli: Distinct roles for DnaA titration by the datA locus and the regulatory inactivation of DnaA
-
Katayama, T., Fujimitsu, K., and Ogawa, T. 2001. Multiple pathways regulating DnaA function in Escherichia coli: distinct roles for DnaA titration by the datA locus and the regulatory inactivation of DnaA. Biochimie 83:13-17.
-
(2001)
Biochimie
, vol.83
, pp. 13-17
-
-
Katayama, T.1
Fujimitsu, K.2
Ogawa, T.3
-
47
-
-
0035422651
-
Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli
-
Kato, J., and Katayama, T. 2001. Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli. EMBO J20:4253-4262.
-
(2001)
EMBO J
, vol.20
, pp. 4253-4262
-
-
Kato, J.1
Katayama, T.2
-
48
-
-
0034795030
-
Arrest of cell division and nucleoid partition by genetic alterations in the sliding clamp of the replicase and in DnaA
-
Kawakami, H., Iwura, T., Takata, M., Sekimizu, K., Hiraga, S., and Katayama T. 2001. Arrest of cell division and nucleoid partition by genetic alterations in the sliding clamp of the replicase and in DnaA. Mol Genet Genomics 266:167-179.
-
(2001)
Mol Genet Genomics
, vol.266
, pp. 167-179
-
-
Kawakami, H.1
Iwura, T.2
Takata, M.3
Sekimizu, K.4
Hiraga, S.5
Katayama, T.6
-
49
-
-
22844437103
-
Formation of an ATP-DnaA-specific initiation complex requires DnaA Arginine 285, a conserved motif in the AAA+ protein family
-
Kawakami, H., Keyamura, K., and Katayama, T. 2005. Formation of an ATP-DnaA-specific initiation complex requires DnaA Arginine 285, a conserved motif in the AAA+ protein family. J Biol Chem 280:27420-27430.
-
(2005)
J Biol Chem
, vol.280
, pp. 27420-27430
-
-
Kawakami, H.1
Keyamura, K.2
Katayama, T.3
-
50
-
-
0029026635
-
DNA polymerase III holoenzyme: Structure and function of a chromosomal replicating machine
-
Kelman, Z., and O'Donnell, M. 1995. DNA polymerase III holoenzyme: structure and function of a chromosomal replicating machine. Annu Rev Biochem 64:171-200.
-
(1995)
Annu Rev Biochem
, vol.64
, pp. 171-200
-
-
Kelman, Z.1
O'Donnell, M.2
-
51
-
-
0037334858
-
Identification of a novel membrane-associated gene product that suppresses toxicity of a TrfA peptide from plasmid RK2 and its relationship to the DnaA host initiation protein
-
Kim, P.D., Banack, T., Lerman, D.M., Tracy J.C., Camara J.E., Crooke E., Oliver D., and Firshein W. 2003. Identification of a novel membrane-associated gene product that suppresses toxicity of a TrfA peptide from plasmid RK2 and its relationship to the DnaA host initiation protein. J Bacteriol 185:1817-1824.
-
(2003)
J Bacteriol
, vol.185
, pp. 1817-1824
-
-
Kim, P.D.1
Banack, T.2
Lerman, D.M.3
Tracy, J.C.4
Camara, J.E.5
Crooke, E.6
Oliver, D.7
Firshein, W.8
-
52
-
-
0030003443
-
A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome
-
Kitagawa, R., Mitsuki, H., Okazaki, T., and Ogawa, T.1996. A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome. Mol Microbiol 19:1137-1147.
-
(1996)
Mol Microbiol
, vol.19
, pp. 1137-1147
-
-
Kitagawa, R.1
Mitsuki, H.2
Okazaki, T.3
Ogawa, T.4
-
53
-
-
0032190630
-
Negative control of replication initiation by a novel chromosomal locus exhibiting exceptional affinity for Escherichia coli DnaA protein
-
Kitagawa, R., Ozaki, T., Moriya, S., and Ogawa, T. 1998. Negative control of replication initiation by a novel chromosomal locus exhibiting exceptional affinity for Escherichia coli DnaA protein. Genes Dev 12:3032-3043.
-
(1998)
Genes Dev
, vol.12
, pp. 3032-3043
-
-
Kitagawa, R.1
Ozaki, T.2
Moriya, S.3
Ogawa, T.4
-
54
-
-
0031002795
-
Coordinate binding of ATP and origin DNA regulates the ATPase activity of the origin recognition complex
-
Klemm, R.D., Austin, R.J., and Bell, S.P. 1997. Coordinate binding of ATP and origin DNA regulates the ATPase activity of the origin recognition complex. Cell 88:493-502.
-
(1997)
Cell
, vol.88
, pp. 493-502
-
-
Klemm, R.D.1
Austin, R.J.2
Bell, S.P.3
-
55
-
-
0032481276
-
A stimulation factor for hydrolysis of ATP bound to DnaA protein, the initiator of chromosomal DNA replication in Escherichia coli
-
Kurokawa, K., Mizushima, T., Kubota, T., Tsuchiya, T., Katayama, T., and Sekimizu, K. 1998. A stimulation factor for hydrolysis of ATP bound to DnaA protein, the initiator of chromosomal DNA replication in Escherichia coli. Biochem Biophys Res Commun 243:90-95.
-
(1998)
Biochem Biophys Res Commun
, vol.243
, pp. 90-95
-
-
Kurokawa, K.1
Mizushima, T.2
Kubota, T.3
Tsuchiya, T.4
Katayama, T.5
Sekimizu, K.6
-
56
-
-
0033485526
-
Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli
-
Kurokawa, K., Nishida, S., Emoto, A., Sekimizu, K., and Katayama, T. 1999. Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli. EMBO J 18:6642-6652.
-
(1999)
EMBO J
, vol.18
, pp. 6642-6652
-
-
Kurokawa, K.1
Nishida, S.2
Emoto, A.3
Sekimizu, K.4
Katayama, T.5
-
57
-
-
2442504231
-
Interaction of the sliding clamp beta-subunit and Hda, a DnaA-related protein
-
Kurz, M., Dalrymple, B., Wijffels, G., and Kongsuwan, K. 2004. Interaction of the sliding clamp beta-subunit and Hda, a DnaA-related protein. J Bacteriol 186:3508-3515.
-
(2004)
J Bacteriol
, vol.186
, pp. 3508-3515
-
-
Kurz, M.1
Dalrymple, B.2
Wijffels, G.3
Kongsuwan, K.4
-
58
-
-
0024651880
-
dam methylation and the initiation of DNA replication on oriC plasmids
-
Landoulsi, A., Hughes, P., Kern, R., and Kohiyama, M. 1989. dam methylation and the initiation of DNA replication on oriC plasmids. Mol Gen Genet 216:217-223.
-
(1989)
Mol Gen Genet
, vol.216
, pp. 217-223
-
-
Landoulsi, A.1
Hughes, P.2
Kern, R.3
Kohiyama, M.4
-
59
-
-
0035860754
-
SeqA protein aggregation is necessary for SeqA function
-
Lee, H., Kang, S, Bae, S.H., Choi, B.S., and Hwang, D.S. 2001. SeqA protein aggregation is necessary for SeqA function. J Biol Chem 276:34600-34606.
-
(2001)
J Biol Chem
, vol.276
, pp. 34600-34606
-
-
Lee, H.1
Kang, S.2
Bae, S.H.3
Choi, B.S.4
Hwang, D.S.5
-
60
-
-
0032553470
-
Localization of bacterial DNA polymerase: Evidence for a factory model of replication
-
Lemon, K.P., and Grossman, A.D. 1998. Localization of bacterial DNA polymerase: evidence for a factory model of replication. Science 282:1516-1519.
-
(1998)
Science
, vol.282
, pp. 1516-1519
-
-
Lemon, K.P.1
Grossman, A.D.2
-
61
-
-
0034509678
-
Movement of replicating DNA through a stationary replisome
-
Lemon, K.P., and Grossman, A.D. 2000. Movement of replicating DNA through a stationary replisome. Mol Cell 6:1321-1330.
-
(2000)
Mol Cell
, vol.6
, pp. 1321-1330
-
-
Lemon, K.P.1
Grossman, A.D.2
-
62
-
-
0034602163
-
The delta subunit of DNA polymerase III holoenzyme serves as a sliding clamp unloader in Escherichia coli
-
Leu, F.P., Hingorani, M.M., Turner, J., and O'Donnell, M. 2000. The delta subunit of DNA polymerase III holoenzyme serves as a sliding clamp unloader in Escherichia coli. J Biol Chem 275:34609-34618.
-
(2000)
J Biol Chem
, vol.275
, pp. 34609-34618
-
-
Leu, F.P.1
Hingorani, M.M.2
Turner, J.3
O'Donnell, M.4
-
63
-
-
15444379601
-
Restoration of growth to acidic phospholipid-deficient cells by DnaA(L366K) is independent of its capacity for nucleotide binding and exchange and requires DnaA
-
Li, Z., Kitchen, J.L., Boeneman, K., Anand, P., and Crooke, E. 2005. Restoration of growth to acidic phospholipid-deficient cells by DnaA(L366K) is independent of its capacity for nucleotide binding and exchange and requires DnaA. J Biol Chem 280:9796-9801.
-
(2005)
J Biol Chem
, vol.280
, pp. 9796-9801
-
-
Li, Z.1
Kitchen, J.L.2
Boeneman, K.3
Anand, P.4
Crooke, E.5
-
64
-
-
0028219947
-
SeqA: A negative modulator of replication initiation in E coli
-
Lu, M., Campbell, J. L., Boye, E., and Kleckner, N. 1994. SeqA: a negative modulator of replication initiation in E coli. Cell 77:413-426.
-
(1994)
Cell
, vol.77
, pp. 413-426
-
-
Lu, M.1
Campbell, J.L.2
Boye, E.3
Kleckner, N.4
-
65
-
-
1542297764
-
Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP
-
McGarry, K.C., Ryan, V.T., Grimwade, J.E., and Leonard, A.C. 2004. Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP. Proc Natl Acad Sci USA 101:2811-2816.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 2811-2816
-
-
McGarry, K.C.1
Ryan, V.T.2
Grimwade, J.E.3
Leonard, A.C.4
-
66
-
-
0344198460
-
Perpetuating the double helix: Molecular machines at eukaryotic DNA replication origins
-
Mendez, J., and Stillman, B. 2003. Perpetuating the double helix: molecular machines at eukaryotic DNA replication origins. Bioessays 25:1158-1167.
-
(2003)
Bioessays
, vol.25
, pp. 1158-1167
-
-
Mendez, J.1
Stillman, B.2
-
67
-
-
0022068066
-
Effect of dam methylation on the activity of the E coli replication origin, oriC
-
Messer, W., Bellekes, U., and Lother, H. 1985. Effect of dam methylation on the activity of the E coli replication origin, oriC. EMBO J4:1327-1332.
-
(1985)
EMBO J
, vol.4
, pp. 1327-1332
-
-
Messer, W.1
Bellekes, U.2
Lother, H.3
-
68
-
-
0036843139
-
The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication
-
Messer, W. 2002. The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication. FEMS Microbiol Rev 26:355-374.
-
(2002)
FEMS Microbiol Rev
, vol.26
, pp. 355-374
-
-
Messer, W.1
-
69
-
-
0035980252
-
Regulation of chromosomal replication by DnaA protein availability in Escherichia coli: Effects of the datA region
-
Morigen, Boye, E., Skarstad, K., and Lobner-Olesen, A. 2001. Regulation of chromosomal replication by DnaA protein availability in Escherichia coli: effects of the datA region. Biochim Biophys Acta 1521:73-80.
-
(2001)
Biochim Biophys Acta
, vol.1521
, pp. 73-80
-
-
Morigen1
Boye, E.2
Skarstad, K.3
Lobner-Olesen, A.4
-
70
-
-
20444496103
-
Deletion of the datA site does not affect once-per-cell-cycle timing but induces rifampin-resistant replication
-
Morigen, Molina, F., and Skarstad, K. 2005. Deletion of the datA site does not affect once-per-cell-cycle timing but induces rifampin-resistant replication. J Bacteriol 187:3913-3920.
-
(2005)
J Bacteriol
, vol.187
, pp. 3913-3920
-
-
Morigen1
Molina, F.2
Skarstad, K.3
-
71
-
-
0032969563
-
AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes
-
Neuwald, A.F., Aravind, L., Spouge, J.L., and Koonin, E.V. 1999. AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res. 9:27-43.
-
(1999)
Genome Res
, vol.9
, pp. 27-43
-
-
Neuwald, A.F.1
Aravind, L.2
Spouge, J.L.3
Koonin, E.V.4
-
72
-
-
0023756458
-
Chromosomal genes essential for stable maintenance of the mini-F plasmid in Escherichia coli
-
Niki, H., Ichinose, C., Ogura, T., Mori, H., Morita, M., Hasegawa, M., Kusukawa, N., and Hiraga, S. 1988. Chromosomal genes essential for stable maintenance of the mini-F plasmid in Escherichia coli. J Bacteriol 170:5272-5278.
-
(1988)
J Bacteriol
, vol.170
, pp. 5272-5278
-
-
Niki, H.1
Ichinose, C.2
Ogura, T.3
Mori, H.4
Morita, M.5
Hasegawa, M.6
Kusukawa, N.7
Hiraga, S.8
-
73
-
-
0025144648
-
Linear multimer formation of plasmid DNA in Escherichia coli hopE(recD) mutants
-
Niki, H., Ogura, T., and Hiraga, S. 1990. Linear multimer formation of plasmid DNA in Escherichia coli hopE(recD) mutants. Mol Gen Genet 224:1-9.
-
(1990)
Mol Gen Genet
, vol.224
, pp. 1-9
-
-
Niki, H.1
Ogura, T.2
Hiraga, S.3
-
74
-
-
0037177830
-
A nucleotide switch in the Escherichia coli DnaA protein initiates chromosomal replication: Evidence from a mutant DnaA protein defective in regulatory ATP hydrolysis in vitro and in vivo
-
Nishida, S., Fujimitsu, K., Sekimizu, K., Ohmura, T., Ueda, T., and Katayama, T. 2002. A nucleotide switch in the Escherichia coli DnaA protein initiates chromosomal replication: Evidence from a mutant DnaA protein defective in regulatory ATP hydrolysis in vitro and in vivo. J Biol Chem 277:14986-14995.
-
(2002)
J Biol Chem
, vol.277
, pp. 14986-14995
-
-
Nishida, S.1
Fujimitsu, K.2
Sekimizu, K.3
Ohmura, T.4
Ueda, T.5
Katayama, T.6
-
75
-
-
0035856473
-
Clamp loader structure predicts the architecture of DNA polymerase III holoenzyme and RFC
-
O'Donnell, M., Jeruzalmi, D., and Kuriyan, J. 2001. Clamp loader structure predicts the architecture of DNA polymerase III holoenzyme and RFC. Curr Biol 11:R935-R946.
-
(2001)
Curr Biol
, vol.11
-
-
O'Donnell, M.1
Jeruzalmi, D.2
Kuriyan, J.3
-
76
-
-
0022335642
-
Conservation of genes and their organization in the chromosomal replication origin region of Bacillus subtilis and Escherichia coli
-
Ogasawara, N., Moriya, S., von Meyenburg, K., Hansen, F.G., and Yoshikawa, H. 1985. Conservation of genes and their organization in the chromosomal replication origin region of Bacillus subtilis and Escherichia coli. EMBO J4:3345-3350.
-
(1985)
EMBO J
, vol.4
, pp. 3345-3350
-
-
Ogasawara, N.1
Moriya, S.2
Von Meyenburg, K.3
Hansen, F.G.4
Yoshikawa, H.5
-
77
-
-
0028262144
-
Cell cyde-dependent transcription from the gid and mioC promoters of Escherichia coli
-
Ogawa, T., and Okazaki, T. 1994. Cell cyde-dependent transcription from the gid and mioC promoters of Escherichia coli. J Bacteriol 176:1609-1615.
-
(1994)
J Bacteriol
, vol.176
, pp. 1609-1615
-
-
Ogawa, T.1
Okazaki, T.2
-
78
-
-
0036015656
-
The datA locus predominantly contributes to the initiator titration mechanism in the control of replication initiation in Escherichia coli
-
Ogawa, T., Yamada, Y., Kuroda, T., Kishi, T., Moriya, S. 2002. The datA locus predominantly contributes to the initiator titration mechanism in the control of replication initiation in Escherichia coli. Mol Microbiol 44:1367-1375.
-
(2002)
Mol Microbiol
, vol.44
, pp. 1367-1375
-
-
Ogawa, T.1
Yamada, Y.2
Kuroda, T.3
Kishi, T.4
Moriya, S.5
-
79
-
-
0024039685
-
The replicative origin of the E coli chromosome binds to cell membranes only when hemimethylated
-
Ogden, G.B., Pratt, M.J., and Schaechter, M. 1988. The replicative origin of the E coli chromosome binds to cell membranes only when hemimethylated. Cell 54:127-135.
-
(1988)
Cell
, vol.54
, pp. 127-135
-
-
Ogden, G.B.1
Pratt, M.J.2
Schaechter, M.3
-
80
-
-
0025264173
-
Identification and characterization of gyrB mutants of Escherichia coli that are defective in partitioning of mini-F plasmids
-
Ogura, T., Niki, H., Mori, H., Morita, M., Hasegawa, M., Ichinose, C., and Hiraga, S. 1990a. Identification and characterization of gyrB mutants of Escherichia coli that are defective in partitioning of mini-F plasmids. J Bacteriol 172:1562-1568.
-
(1990)
J Bacteriol
, vol.172
, pp. 1562-1568
-
-
Ogura, T.1
Niki, H.2
Mori, H.3
Morita, M.4
Hasegawa, M.5
Ichinose, C.6
Hiraga, S.7
-
81
-
-
0025056488
-
Maintenance of plasmids in HU and IHF mutants of Escherichia coli
-
Ogura, T., Niki, H., Kano, Y., Imamoto, F., and Hiraga, S. 1990b. Maintenance of plasmids in HU and IHF mutants of Escherichia coli. Mol Gen Genet 220:197-203.
-
(1990)
Mol Gen Genet
, vol.220
, pp. 197-203
-
-
Ogura, T.1
Niki, H.2
Kano, Y.3
Imamoto, F.4
Hiraga, S.5
-
83
-
-
0033030083
-
The assembly and migration of SeqA-Gfp fusion in living cells of Escherichia coli
-
Onogi, T., Niki, H. Yamazoe, M., and Hiraga, S. 1999. The assembly and migration of SeqA-Gfp fusion in living cells of Escherichia coli. Mol Microbiol 31:1775-1782.
-
(1999)
Mol Microbiol
, vol.31
, pp. 1775-1782
-
-
Onogi, T.1
Niki, H.2
Yamazoe, M.3
Hiraga, S.4
-
84
-
-
29744467790
-
-
submitted
-
Ote, T., Hashimoto, M., Ikeuchi, Y., Su'etsugu, M., Suzuki, T., Katayama, T., and Kato, J. Involvement of the Escherichia coli folate-binding protein YgfZin RNA modification and the regulation of the initiation of chromosome replication. (submitted).
-
Involvement of the Escherichia coli Folate-binding Protein YgfZin RNA Modification and the Regulation of the Initiation of Chromosome Replication
-
-
Ote, T.1
Hashimoto, M.2
Ikeuchi, Y.3
Su'etsugu, M.4
Suzuki, T.5
Katayama, T.6
Kato, J.7
-
85
-
-
0031940593
-
Negative control of bacterial DNA replication by a cell cycle regulatory protein that binds at the chromosome origin
-
Quon, K.C., Yang, B., Domian, I.J., Shapiro, L., and Marczynski, G.T. 1998. Negative control of bacterial DNA replication by a cell cycle regulatory protein that binds at the chromosome origin. Proc Natl Acad Sci USA 95:120-125.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 120-125
-
-
Quon, K.C.1
Yang, B.2
Domian, I.J.3
Shapiro, L.4
Marczynski, G.T.5
-
86
-
-
1842509904
-
DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding
-
Remus, D., Beall, E.L., and Botchan, M.R. 2004. DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding. EMBO J23:897-907.
-
(2004)
EMBO J
, vol.23
, pp. 897-907
-
-
Remus, D.1
Beall, E.L.2
Botchan, M.R.3
-
87
-
-
0031897521
-
High-affinity binding sites for the initiator protein DnaA on the chromosome of Escherichia coli
-
Roth, A., and Messer, W. 1998. High-affinity binding sites for the initiator protein DnaA on the chromosome of Escherichia coli. Mol Microbiol 28:395-401.
-
(1998)
Mol Microbiol
, vol.28
, pp. 395-401
-
-
Roth, A.1
Messer, W.2
-
88
-
-
0023665145
-
Hemimethylation prevents DNA replication in E coli
-
Russell, D.W., and Zinder, N.D. 1987. Hemimethylation prevents DNA replication in E coli. Cell 50:1071-1079.
-
(1987)
Cell
, vol.50
, pp. 1071-1079
-
-
Russell, D.W.1
Zinder, N.D.2
-
89
-
-
0034687677
-
Stepwise assembly of initiation proteins at budding yeast replication origins in vitro
-
Seki, T., and Diffley, J.F. 2000. Stepwise assembly of initiation proteins at budding yeast replication origins in vitro. Proc Natl Acad Sci USA 97:14115-14120.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 14115-14120
-
-
Seki, T.1
Diffley, J.F.2
-
90
-
-
0023658349
-
ATP activates DnaA protein in initiating replication of plasmids bearing the origin of the E coli chromosome
-
Sekimizu, K., Bramhill, D., and Kornberg, A. 1987. ATP activates DnaA protein in initiating replication of plasmids bearing the origin of the E coli chromosome. Cell 50:259-265.
-
(1987)
Cell
, vol.50
, pp. 259-265
-
-
Sekimizu, K.1
Bramhill, D.2
Kornberg, A.3
-
91
-
-
0023904203
-
Cardiolipin activation of DnaA protein, the initiation protein of replication in Escherichia coli
-
Sekimizu, K., and Kornberg, A. 1988. Cardiolipin activation of DnaA protein, the initiation protein of replication in Escherichia coli. J Biol Chem 263:7131-7135.
-
(1988)
J Biol Chem
, vol.263
, pp. 7131-7135
-
-
Sekimizu, K.1
Kornberg, A.2
-
92
-
-
0023879189
-
The DnaA protein of Escherichia coli. Abundance, improved purification, and membrane binding
-
Sekimizu, K., Yung, B.Y., and Kornberg, A. 1988. The DnaA protein of Escherichia coli. Abundance, improved purification, and membrane binding. J Biol Chem 263:7136-7140.
-
(1988)
J Biol Chem
, vol.263
, pp. 7136-7140
-
-
Sekimizu, K.1
Yung, B.Y.2
Kornberg, A.3
-
93
-
-
0029088758
-
Interaction of the initiator protein DnaA of Escherichia coli with its DNA target
-
Schaper, S., and Messer, W. 1995. Interaction of the initiator protein DnaA of Escherichia coli with its DNA target. J Biol Chem 270:17622-17626.
-
(1995)
J Biol Chem
, vol.270
, pp. 17622-17626
-
-
Schaper, S.1
Messer, W.2
-
94
-
-
0028307323
-
A mutant cysteinyl-tRNA synthetase affecting timing of chromosomal replication initiation in B. subtilis and conferring resistance to a protein kinase C inhibitor
-
Seror, S.J., Casaregola, S., Vannier, F., Zouari, N., Dahl, M., and Boye, E. 1994. A mutant cysteinyl-tRNA synthetase affecting timing of chromosomal replication initiation in B. subtilis and conferring resistance to a protein kinase C inhibitor. EMBO J 13:2472-2480.
-
(1994)
EMBO J
, vol.13
, pp. 2472-2480
-
-
Seror, S.J.1
Casaregola, S.2
Vannier, F.3
Zouari, N.4
Dahl, M.5
Boye, E.6
-
95
-
-
0032530831
-
High-affinity binding of hemimethylated oriC by Escherichia coli membranes is mediated by a multiprotein system that includes SeqA and a newly identified factor, SeqB
-
Shakiba, N., Ishidate, K., Reshetnyak, E., Gunji, S., Kohiyama, M., and Rothfield, L. 1998. High-affinity binding of hemimethylated oriC by Escherichia coli membranes is mediated by a multiprotein system that includes SeqA and a newly identified factor, SeqB. Proc Natl Acad Sci USA 95:11117-11121.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 11117-11121
-
-
Shakiba, N.1
Ishidate, K.2
Reshetnyak, E.3
Gunji, S.4
Kohiyama, M.5
Rothfield, L.6
-
96
-
-
0033935409
-
The Escherichia coli SeqA protein binds specifically and co-operatively to two sites in hemimethylated and fully methylated oriC
-
Skarstad, K., Lueder, G., Lurz, R., Speck, C., and Messer, W. 2000. The Escherichia coli SeqA protein binds specifically and co-operatively to two sites in hemimethylated and fully methylated oriC. Mol Microbiol 36:1319-1326.
-
(2000)
Mol Microbiol
, vol.36
, pp. 1319-1326
-
-
Skarstad, K.1
Lueder, G.2
Lurz, R.3
Speck, C.4
Messer, W.5
-
97
-
-
0029147297
-
E coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration
-
Slater, S., Wold, S., Lu, M., Boye, E., Skarstad, K., and Kleckner, N. 1995. E coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration. Cell 82:927-936.
-
(1995)
Cell
, vol.82
, pp. 927-936
-
-
Slater, S.1
Wold, S.2
Lu, M.3
Boye, E.4
Skarstad, K.5
Kleckner, N.6
-
98
-
-
0035116562
-
The Escherichia coli SeqA protein binds specifically to two sites in fully and hemimethylated oriC and has the capacity to inhibit DNA replication and affect chromosome topology
-
Skarstad, K., Torheim, N., Wold, S., Lurz, R., Messer, W., Fossum, S., and Bach, T. 2001 The Escherichia coli SeqA protein binds specifically to two sites in fully and hemimethylated oriC and has the capacity to inhibit DNA replication and affect chromosome topology. Biochimie 83:49-51.
-
(2001)
Biochimie
, vol.83
, pp. 49-51
-
-
Skarstad, K.1
Torheim, N.2
Wold, S.3
Lurz, R.4
Messer, W.5
Fossum, S.6
Bach, T.7
-
99
-
-
0022067592
-
Importance of state of methylation of oriC GATC sites in initiation of DNA replication in Escherichia coli
-
Smith, D.W., Garland, A.M., Herman, G., Enns, R.E., Baker, T.A., and Zyskind J.W. 1985. Importance of state of methylation of oriC GATC sites in initiation of DNA replication in Escherichia coli. EMBO J 4:1319-1326.
-
(1985)
EMBO J
, vol.4
, pp. 1319-1326
-
-
Smith, D.W.1
Garland, A.M.2
Herman, G.3
Enns, R.E.4
Baker, T.A.5
Zyskind, J.W.6
-
100
-
-
0033229814
-
ATP- and ADP-dnaA protein, a molecular switch in gene regulation
-
Speck, C., Weigel, C., and Messer, W. 1999. ATP- and ADP-dnaA protein, a molecular switch in gene regulation. EMBO J 18:6169-6176.
-
(1999)
EMBO J
, vol.18
, pp. 6169-6176
-
-
Speck, C.1
Weigel, C.2
Messer, W.3
-
101
-
-
0035869023
-
Mechanism of origin unwinding: Sequential binding of DnaA to double- and single-stranded DNA
-
Speck, C., and Messer, W. 2001. Mechanism of origin unwinding: sequential binding of DnaA to double- and single-stranded DNA. EMBO J 20:1469-1476.
-
(2001)
EMBO J
, vol.20
, pp. 1469-1476
-
-
Speck, C.1
Messer, W.2
-
103
-
-
0141747246
-
Transcription control for chromosomal replication in Escherichia coli: Fluctuation of the level of origin transcription ensures timely initiation
-
Su'etsugu, M., Emoto, A., Fujimitsu, K., Keyamura, K., and Katayama, T. 2003. Transcription control for chromosomal replication in Escherichia coli: fluctuation of the level of origin transcription ensures timely initiation. Genes Cells 8:731-745.
-
(2003)
Genes Cells
, vol.8
, pp. 731-745
-
-
Su'etsugu, M.1
Emoto, A.2
Fujimitsu, K.3
Keyamura, K.4
Katayama, T.5
-
104
-
-
3042815929
-
Molecular mechanism of DNA replication-coupled inactivation of the initiator protein in Escherichia coli: Interaction of DnaA with the sliding clamp-loaded DNA and the sliding clamp-Hda complex
-
Su'etsugu, M., Takata, M., Kubota, T., Matsuda, Y., and Katayama, T. 2004. Molecular mechanism of DNA replication-coupled inactivation of the initiator protein in Escherichia coli: interaction of DnaA with the sliding clamp-loaded DNA and the sliding clamp-Hda complex. Genes Cells. 9:509-522.
-
(2004)
Genes Cells
, vol.9
, pp. 509-522
-
-
Su'etsugu, M.1
Takata, M.2
Kubota, T.3
Matsuda, Y.4
Katayama, T.5
-
105
-
-
14844288292
-
Protein associations in DnaA-ATP hydrolysis mediated by the Hda-replicase clamp complex
-
Su'etsugu, M., Shimuta, T.R., Ishida, T., Kawakami, H., and Katayama, T. 2005. Protein associations in DnaA-ATP hydrolysis mediated by the Hda-replicase clamp complex. J Biol Chem 280:6528-6536.
-
(2005)
J Biol Chem
, vol.280
, pp. 6528-6536
-
-
Su'etsugu, M.1
Shimuta, T.R.2
Ishida, T.3
Kawakami, H.4
Katayama, T.5
-
106
-
-
0034507706
-
Competition between the replication initiator DnaA and the sequestration factor SeqA for binding to the hemimethylated chromosomal origin of E coli in vitro
-
Taghbalout, A., Landoulsi, A., Kern, R., Yamazoe, M., Hiraga, S., Holland, B., Kohiyama, M., and Malki, A. 2000. Competition between the replication initiator DnaA and the sequestration factor SeqA for binding to the hemimethylated chromosomal origin of E coli in vitro. Genes Cells 5:873-884.
-
(2000)
Genes Cells
, vol.5
, pp. 873-884
-
-
Taghbalout, A.1
Landoulsi, A.2
Kern, R.3
Yamazoe, M.4
Hiraga, S.5
Holland, B.6
Kohiyama, M.7
Malki, A.8
-
107
-
-
6044267984
-
Crystal structure of the YgfZ protein from Escherichia coli suggests afolate-dependent regulatory role in one-carbon metabolism
-
Teplyakov, A., Obmolova, G., Sarikaya, E., Pullalarevu, S., Krajewski, W., Galkin, A., Howard, A.J, Herzberg, O., and Gilliland, G.L. 2004. Crystal structure of the YgfZ protein from Escherichia coli suggests afolate-dependent regulatory role in one-carbon metabolism. J Bacteriol 186:7134-7140.
-
(2004)
J Bacteriol
, vol.186
, pp. 7134-7140
-
-
Teplyakov, A.1
Obmolova, G.2
Sarikaya, E.3
Pullalarevu, S.4
Krajewski, W.5
Galkin, A.6
Howard, A.J.7
Herzberg, O.8
Gilliland, G.L.9
-
108
-
-
0027482233
-
Correlation of gene transcription with the time of initiation of chromosome replication in Escherichia coli
-
Theisen, P.W., Grimwade, J.E., Leonard, A.C., Bogan, J.A., and Helmstetter, C.E. 1993. Correlation of gene transcription with the time of initiation of chromosome replication in Escherichia coli. Mol Microbiol 10:575-584.
-
(1993)
Mol Microbiol
, vol.10
, pp. 575-584
-
-
Theisen, P.W.1
Grimwade, J.E.2
Leonard, A.C.3
Bogan, J.A.4
Helmstetter, C.E.5
-
109
-
-
0033200099
-
Escherichia coli SeqA protein affects DNA topology and inhibits open complex formation at oriC
-
Torheim, N.K., and Skarstad, K. 1999. Escherichia coli SeqA protein affects DNA topology and inhibits open complex formation at oriC. EMBO J 18:4882-4888.
-
(1999)
EMBO J
, vol.18
, pp. 4882-4888
-
-
Torheim, N.K.1
Skarstad, K.2
-
110
-
-
0035854791
-
Assembly of the human origin recognition complex
-
Vashee, S., Simancek, P., Challberg, M.D., and Kelly, T.J. 2001. Assembly of the human origin recognition complex. J Biol Chem 276:26666-26673.
-
(2001)
J Biol Chem
, vol.276
, pp. 26666-26673
-
-
Vashee, S.1
Simancek, P.2
Challberg, M.D.3
Kelly, T.J.4
-
111
-
-
0028148879
-
SeqA limits DnaA activity in replication from oriC in Escherichia coli
-
von Freiesleben, U., Rasmussen, K. V., and Schaechter, M. 1994. SeqA limits DnaA activity in replication from oriC in Escherichia coli. Mol Microbiol 14:763-772.
-
(1994)
Mol Microbiol
, vol.14
, pp. 763-772
-
-
Von Freiesleben, U.1
Rasmussen, K.V.2
Schaechter, M.3
-
112
-
-
0034573198
-
Escherichia coli cell cycle control genes affect chromosome superhelicity
-
Weitao, T., Nordstrom, K., and Dasgupta, S. 2000. Escherichia coli cell cycle control genes affect chromosome superhelicity. EMBO Rep 1:494-499.
-
(2000)
EMBO Rep
, vol.1
, pp. 494-499
-
-
Weitao, T.1
Nordstrom, K.2
Dasgupta, S.3
-
113
-
-
0028837935
-
In vivo evidence for the involvement of anionic phospholipids in initiation of DNA replication in Escherichia coli
-
Xia, W., and Dowhan, W. 1995. In vivo evidence for the involvement of anionic phospholipids in initiation of DNA replication in Escherichia coli. Proc Natl Acad Sci USA 92:783-787.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 783-787
-
-
Xia, W.1
Dowhan, W.2
-
114
-
-
0035282783
-
Mutations in DnaA protein suppress the growth arrest of acidic phospholipid-deficient Escherichia coli cells
-
Zheng, W., Li, Z., Skarstad, K., and Crooke, E. 2001. Mutations in DnaA protein suppress the growth arrest of acidic phospholipid-deficient Escherichia coli cells. EMBO J20:1164-1172.
-
(2001)
EMBO J
, vol.20
, pp. 1164-1172
-
-
Zheng, W.1
Li, Z.2
Skarstad, K.3
Crooke, E.4
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