메뉴 건너뛰기




Volumn 20, Issue 7, 2004, Pages 314-319

RNAi protects the Caenorhabditis elegans germline against transposition

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED RNA; RNA DIRECTED RNA POLYMERASE; RNA INDUCED SILENCING COMPLEX; SMALL INTERFERING RNA; TRANSPOSASE;

EID: 2942714830     PISSN: 01689525     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tig.2004.04.011     Document Type: Review
Times cited : (81)

References (58)
  • 2
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • Lander E.S., et al. Initial sequencing and analysis of the human genome. Nature. 409:2001;860-921
    • (2001) Nature , vol.409 , pp. 860-921
    • Lander, E.S.1
  • 3
    • 0032509302 scopus 로고    scopus 로고
    • Genome sequence of the nematode C. elegans: A platform for investigating biology
    • C. elegans Sequencing Consortium. Genome sequence of the nematode C. elegans: a platform for investigating biology. Science. 282:1998;2012-2018
    • (1998) Science , vol.282 , pp. 2012-2018
  • 4
    • 0038192415 scopus 로고    scopus 로고
    • Continuous exchange of sequence information between dispersed Tc1 transposons in the Caenorhabditis elegans genome
    • Fischer S.E., et al. Continuous exchange of sequence information between dispersed Tc1 transposons in the Caenorhabditis elegans genome. Genetics. 164:2003;127-134
    • (2003) Genetics , vol.164 , pp. 127-134
    • Fischer, S.E.1
  • 5
    • 0033179759 scopus 로고    scopus 로고
    • Resident aliens: The Tc1/mariner superfamily of transposable elements
    • Plasterk R.H., et al. Resident aliens: the Tc1/mariner superfamily of transposable elements. Trends Genet. 15:1999;326-332
    • (1999) Trends Genet. , vol.15 , pp. 326-332
    • Plasterk, R.H.1
  • 6
    • 0025911348 scopus 로고
    • The origin of footprints of the Tc1 transposon of Caenorhabditis elegans
    • Plasterk R.H. The origin of footprints of the Tc1 transposon of Caenorhabditis elegans. EMBO J. 10:1991;1919-1925
    • (1991) EMBO J. , vol.10 , pp. 1919-1925
    • Plasterk, R.H.1
  • 7
    • 0026526771 scopus 로고
    • Targeted alterations of the Caenorhabditis elegans genome by transgene instructed DNA double strand break repair following Tc1 excision
    • Plasterk, R. and H. and Groenen, J.T. (1992) Targeted alterations of the Caenorhabditis elegans genome by transgene instructed DNA double strand break repair following Tc1 excision. EMBO J. 11, 287-290.
    • (1992) EMBO J. , vol.11 , pp. 287-290
    • Plasterk, R.1    Plasterk, H.2    Groenen, J.T.3
  • 8
    • 0029930255 scopus 로고    scopus 로고
    • Transposase is the only nematode protein required for in vitro transposition of Tc1
    • Vos J.C., et al. Transposase is the only nematode protein required for in vitro transposition of Tc1. Genes Dev. 10:1996;755-761
    • (1996) Genes Dev. , vol.10 , pp. 755-761
    • Vos, J.C.1
  • 9
    • 0029818461 scopus 로고    scopus 로고
    • A purified mariner transposase is sufficient to mediate transposition in vitro
    • Lampe D.J., et al. A purified mariner transposase is sufficient to mediate transposition in vitro. EMBO J. 15:1996;5470-5479
    • (1996) EMBO J. , vol.15 , pp. 5470-5479
    • Lampe, D.J.1
  • 10
    • 0034141785 scopus 로고    scopus 로고
    • Cis and trans factors affecting Mos1 mariner evolution and transposition in vitro, and its potential for functional genomics
    • Tosi, L. and R. and Beverley, S.M. (2000) cis and trans factors affecting Mos1 mariner evolution and transposition in vitro, and its potential for functional genomics. Nucleic Acids Res. 28, 784-790.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 784-790
    • Tosi, L.1    Tosi, R.2    Beverley, S.M.3
  • 11
    • 0032518560 scopus 로고    scopus 로고
    • Transposition of the nematode Caenorhabditis elegans Tc3 element in the zebrafish Danio rerio
    • Raz E., et al. Transposition of the nematode Caenorhabditis elegans Tc3 element in the zebrafish Danio rerio. Curr. Biol. 8:1998;82-88
    • (1998) Curr. Biol. , vol.8 , pp. 82-88
    • Raz, E.1
  • 12
    • 2642698856 scopus 로고    scopus 로고
    • Transposon Tc1 of the nematode Caenorhabditis elegans jumps in human cells
    • Schouten G.J., et al. Transposon Tc1 of the nematode Caenorhabditis elegans jumps in human cells. Nucleic Acids Res. 26:1998;3013-3017
    • (1998) Nucleic Acids Res. , vol.26 , pp. 3013-3017
    • Schouten, G.J.1
  • 13
    • 0021248573 scopus 로고
    • High-frequency excision of transposable element Tc1 in the nematode Caenorhabditis elegans is limited to somatic cells
    • Emmons, S. and W. and Yesner, L. (1984) High-frequency excision of transposable element Tc1 in the nematode Caenorhabditis elegans is limited to somatic cells. Cell 36, 599-605.
    • (1984) Cell , vol.36 , pp. 599-605
    • Emmons, S.1    Emmons, W.2    Yesner, L.3
  • 14
    • 0032739015 scopus 로고    scopus 로고
    • Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD
    • Ketting R.F., et al. Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD. Cell. 99:1999;133-141
    • (1999) Cell , vol.99 , pp. 133-141
    • Ketting, R.F.1
  • 15
    • 0032717319 scopus 로고    scopus 로고
    • The rde-1 gene, RNA interference, and transposon silencing in C. elegans
    • Tabara H., et al. The rde-1 gene, RNA interference, and transposon silencing in C. elegans. Cell. 99:1999;123-132
    • (1999) Cell , vol.99 , pp. 123-132
    • Tabara, H.1
  • 16
    • 0037188904 scopus 로고    scopus 로고
    • The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH- box helicase to direct RNAi in C. elegans
    • Tabara H., et al. The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH- box helicase to direct RNAi in C. elegans. Cell. 109:2002;861-871
    • (2002) Cell , vol.109 , pp. 861-871
    • Tabara, H.1
  • 17
    • 0035887005 scopus 로고    scopus 로고
    • Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans
    • Ketting R.F., et al. Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans. Genes Dev. 15:2001;2654-2659
    • (2001) Genes Dev. , vol.15 , pp. 2654-2659
    • Ketting, R.F.1
  • 18
    • 0035905766 scopus 로고    scopus 로고
    • Role for a bidentate ribonuclease in the initiation step of RNA interference
    • Bernstein E., et al. Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature. 409:2001;363-366
    • (2001) Nature , vol.409 , pp. 363-366
    • Bernstein, E.1
  • 19
    • 0035929322 scopus 로고    scopus 로고
    • A role for the RNase III enzyme DCR-1 in RNA interference and germ line development in Caenorhabditis elegans
    • Knight S.W., Bass B.L. A role for the RNase III enzyme DCR-1 in RNA interference and germ line development in Caenorhabditis elegans. Science. 293:2001;2269-2271
    • (2001) Science , vol.293 , pp. 2269-2271
    • Knight, S.W.1    Bass, B.L.2
  • 20
    • 17844364875 scopus 로고    scopus 로고
    • Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing
    • Grishok A., et al. Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing. Cell. 106:2001;23-34
    • (2001) Cell , vol.106 , pp. 23-34
    • Grishok, A.1
  • 21
    • 0034673638 scopus 로고    scopus 로고
    • An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells
    • Hammond S.M., et al. An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells. Nature. 404:2000;293-296
    • (2000) Nature , vol.404 , pp. 293-296
    • Hammond, S.M.1
  • 22
    • 0345306117 scopus 로고    scopus 로고
    • Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi
    • Sijen T., Plasterk R.H. Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi. Nature. 426:2003;310-314
    • (2003) Nature , vol.426 , pp. 310-314
    • Sijen, T.1    Plasterk, R.H.2
  • 23
    • 0037737975 scopus 로고    scopus 로고
    • MicroRNAs and other tiny endogenous RNAs in C. elegans
    • Ambros V., et al. MicroRNAs and other tiny endogenous RNAs in C. elegans. Curr. Biol. 13:2003;807-818
    • (2003) Curr. Biol. , vol.13 , pp. 807-818
    • Ambros, V.1
  • 24
    • 0034708215 scopus 로고    scopus 로고
    • EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans
    • Smardon A., et al. EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans. Curr. Biol. 10:2000;169-178
    • (2000) Curr. Biol. , vol.10 , pp. 169-178
    • Smardon, A.1
  • 25
    • 0035900651 scopus 로고    scopus 로고
    • On the role of RNA amplification in dsRNA-triggered gene silencing
    • Sijen T., et al. On the role of RNA amplification in dsRNA-triggered gene silencing. Cell. 107:2001;465-476
    • (2001) Cell , vol.107 , pp. 465-476
    • Sijen, T.1
  • 26
    • 0037169034 scopus 로고    scopus 로고
    • RNA helicase MUT-14-dependent gene silencing triggered in C. elegans by short antisense RNAs
    • Tijsterman M., et al. RNA helicase MUT-14-dependent gene silencing triggered in C. elegans by short antisense RNAs. Science. 295:2002;694-697
    • (2002) Science , vol.295 , pp. 694-697
    • Tijsterman, M.1
  • 27
    • 0043202980 scopus 로고    scopus 로고
    • A genome-wide screen identifies 27 genes involved in transposon silencing in C. elegans
    • Vastenhouw N.L., et al. A genome-wide screen identifies 27 genes involved in transposon silencing in C. elegans. Curr. Biol. 13:2003;1311-1316
    • (2003) Curr. Biol. , vol.13 , pp. 1311-1316
    • Vastenhouw, N.L.1
  • 28
    • 0038721055 scopus 로고    scopus 로고
    • An siRNA ribonucleoprotein is found associated with polyribosomes in Trypanosoma brucei
    • Djikeng A., et al. An siRNA ribonucleoprotein is found associated with polyribosomes in Trypanosoma brucei. RNA. 9:2003;802-808
    • (2003) RNA , vol.9 , pp. 802-808
    • Djikeng, A.1
  • 29
    • 0142165230 scopus 로고    scopus 로고
    • The double life of ribosomal proteins
    • Zimmermann R.A. The double life of ribosomal proteins. Cell. 115:2003;130-132
    • (2003) Cell , vol.115 , pp. 130-132
    • Zimmermann, R.A.1
  • 30
    • 0036828639 scopus 로고    scopus 로고
    • The Argonaute family: Tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis
    • Carmell M.A., et al. The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis. Genes Dev. 16:2002;2733-2742
    • (2002) Genes Dev. , vol.16 , pp. 2733-2742
    • Carmell, M.A.1
  • 31
    • 0942279635 scopus 로고    scopus 로고
    • RNAi-mediated targeting of heterochromatin by the RITS complex
    • Verdel A., et al. RNAi-mediated targeting of heterochromatin by the RITS complex. Science. 303:2004;672-676
    • (2004) Science , vol.303 , pp. 672-676
    • Verdel, A.1
  • 32
    • 0642345790 scopus 로고    scopus 로고
    • Structure and conserved RNA binding of the PAZ domain
    • Yan K.S., et al. Structure and conserved RNA binding of the PAZ domain. Nature. 426:2003;468-474
    • (2003) Nature , vol.426 , pp. 468-474
    • Yan, K.S.1
  • 33
    • 0345490960 scopus 로고    scopus 로고
    • The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes
    • Song J.J., et al. The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes. Nat. Struct. Biol. 10:2003;1026-1032
    • (2003) Nat. Struct. Biol. , vol.10 , pp. 1026-1032
    • Song, J.J.1
  • 34
    • 0035839109 scopus 로고    scopus 로고
    • Argonaute2, a link between genetic and biochemical analyses of RNAi
    • Hammond S.M., et al. Argonaute2, a link between genetic and biochemical analyses of RNAi. Science. 293:2001;1146-1150
    • (2001) Science , vol.293 , pp. 1146-1150
    • Hammond, S.M.1
  • 35
    • 0037031576 scopus 로고    scopus 로고
    • Single-stranded antisense siRNAs guide target RNA cleavage in RNAi
    • Martinez J., et al. Single-stranded antisense siRNAs guide target RNA cleavage in RNAi. Cell. 110:2002;563-574
    • (2002) Cell , vol.110 , pp. 563-574
    • Martinez, J.1
  • 36
    • 0037015303 scopus 로고    scopus 로고
    • PPW-1, a PAZ/PIWI protein required for efficient germline RNAi, is defective in a natural isolate of C. elegans
    • Tijsterman M., et al. PPW-1, a PAZ/PIWI protein required for efficient germline RNAi, is defective in a natural isolate of C. elegans. Curr. Biol. 12:2002;1535-1540
    • (2002) Curr. Biol. , vol.12 , pp. 1535-1540
    • Tijsterman, M.1
  • 37
    • 0042831010 scopus 로고    scopus 로고
    • Hairpin RNAs and retrotransposon LTRs effect RNAi and chromatin-based gene silencing
    • Schramke V., Allshire R. Hairpin RNAs and retrotransposon LTRs effect RNAi and chromatin-based gene silencing. Science. 301:2003;1069-1074
    • (2003) Science , vol.301 , pp. 1069-1074
    • Schramke, V.1    Allshire, R.2
  • 38
    • 0035282119 scopus 로고    scopus 로고
    • Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene Decrease in DNA Methylation (DDM1)
    • Singer T., et al. Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene Decrease in DNA Methylation (DDM1). Genes Dev. 15:2001;591-602
    • (2001) Genes Dev. , vol.15 , pp. 591-602
    • Singer, T.1
  • 39
    • 0035837378 scopus 로고    scopus 로고
    • Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis
    • Miura A., et al. Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis. Nature. 411:2001;212-214
    • (2001) Nature , vol.411 , pp. 212-214
    • Miura, A.1
  • 40
    • 0037154169 scopus 로고    scopus 로고
    • Suppressors of transcriptional transgenic silencing in Chlamydomonas are sensitive to DNA-damaging agents and reactive transposable elements
    • Jeong B.R., et al. Suppressors of transcriptional transgenic silencing in Chlamydomonas are sensitive to DNA-damaging agents and reactive transposable elements. Proc. Natl. Acad. Sci. U. S. A. 99:2002;1076-1081
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , pp. 1076-1081
    • Jeong, B.R.1
  • 41
    • 0037084213 scopus 로고    scopus 로고
    • Transcriptional cosuppression of yeast Ty1 retrotransposons
    • Jiang Y.W. Transcriptional cosuppression of yeast Ty1 retrotransposons. Genes Dev. 16:2002;467-478
    • (2002) Genes Dev. , vol.16 , pp. 467-478
    • Jiang, Y.W.1
  • 42
    • 0023228243 scopus 로고
    • Activation of a transposable element in the germ-line but not the soma of Caenorhabditis elegans
    • Collins J., et al. Activation of a transposable element in the germ-line but not the soma of Caenorhabditis elegans. Nature. 328:1987;726-728
    • (1987) Nature , vol.328 , pp. 726-728
    • Collins, J.1
  • 43
    • 0035425379 scopus 로고    scopus 로고
    • RNA silencing as a plant immune system against viruses
    • Voinnet O. RNA silencing as a plant immune system against viruses. Trends Genet. 17:2001;449-459
    • (2001) Trends Genet. , vol.17 , pp. 449-459
    • Voinnet, O.1
  • 44
    • 0025136824 scopus 로고
    • Interstrain crosses enhance excision of Tc1 transposable elements in Caenorhabditis elegans
    • Mori I., et al. Interstrain crosses enhance excision of Tc1 transposable elements in Caenorhabditis elegans. Mol. Gen. Genet. 220:1990;251-255
    • (1990) Mol. Gen. Genet. , vol.220 , pp. 251-255
    • Mori, I.1
  • 45
    • 0032954098 scopus 로고    scopus 로고
    • Taming of transposable elements by homology-dependent gene silencing
    • Jensen S., et al. Taming of transposable elements by homology-dependent gene silencing. Nat. Genet. 21:1999;209-212
    • (1999) Nat. Genet. , vol.21 , pp. 209-212
    • Jensen, S.1
  • 46
    • 0034533315 scopus 로고    scopus 로고
    • Artificial and epigenetic regulation of the I factor, a nonviral retrotransposon of Drosophila melanogaster
    • Gauthier E., et al. Artificial and epigenetic regulation of the I factor, a nonviral retrotransposon of Drosophila melanogaster. Genetics. 156:2000;1867-1878
    • (2000) Genetics , vol.156 , pp. 1867-1878
    • Gauthier, E.1
  • 47
    • 0033756232 scopus 로고    scopus 로고
    • New insights on homology-dependent silencing of I factor activity by transgenes containing ORF1 in Drosophila melanogaster
    • Malinsky S., et al. New insights on homology-dependent silencing of I factor activity by transgenes containing ORF1 in Drosophila melanogaster. Genetics. 156:2000;1147-1155
    • (2000) Genetics , vol.156 , pp. 1147-1155
    • Malinsky, S.1
  • 48
    • 0035966319 scopus 로고    scopus 로고
    • MicroRNAs: Tiny regulators with great potential
    • Ambros V. microRNAs: tiny regulators with great potential. Cell. 107:2001;823-826
    • (2001) Cell , vol.107 , pp. 823-826
    • Ambros, V.1
  • 49
    • 0037009364 scopus 로고    scopus 로고
    • MicroRNA maturation: Stepwise processing and subcellular localization
    • Lee Y., et al. MicroRNA maturation: stepwise processing and subcellular localization. EMBO J. 21:2002;4663-4670
    • (2002) EMBO J. , vol.21 , pp. 4663-4670
    • Lee, Y.1
  • 50
    • 0141843656 scopus 로고    scopus 로고
    • The nuclear RNase III Drosha initiates microRNA processing
    • Lee Y., et al. The nuclear RNase III Drosha initiates microRNA processing. Nature. 425:2003;415-419
    • (2003) Nature , vol.425 , pp. 415-419
    • Lee, Y.1
  • 51
    • 0034634360 scopus 로고    scopus 로고
    • Transgene and transposon silencing in Chlamydomonas reinhardtii by DEAH-Box RNA helicase
    • Wu-Scharf D., et al. Transgene and transposon silencing in Chlamydomonas reinhardtii by DEAH-Box RNA helicase. Science. 290:2000;1159-1162
    • (2000) Science , vol.290 , pp. 1159-1162
    • Wu-Scharf, D.1
  • 52
    • 0035160923 scopus 로고    scopus 로고
    • RNA interference in Trypanosoma brucei: Cloning of small interfering RNAs provides evidence for retroposon-derived 24-26 nucleotide RNAs
    • Djikeng A., et al. RNA interference in Trypanosoma brucei: cloning of small interfering RNAs provides evidence for retroposon-derived 24-26 nucleotide RNAs. RNA. 7:2001;1522-1530
    • (2001) RNA , vol.7 , pp. 1522-1530
    • Djikeng, A.1
  • 53
    • 0035838369 scopus 로고    scopus 로고
    • Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline
    • Aravin A.A., et al. Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline. Curr. Biol. 11:2001;1017-1027
    • (2001) Curr. Biol. , vol.11 , pp. 1017-1027
    • Aravin, A.A.1
  • 54
    • 0037355425 scopus 로고    scopus 로고
    • Initiation of silencing of maize MuDR/Mu transposable elements
    • Rudenko G.N., et al. Initiation of silencing of maize MuDR/Mu transposable elements. Plant J. 33:2003;1013-1025
    • (2003) Plant J. , vol.33 , pp. 1013-1025
    • Rudenko, G.N.1
  • 55
    • 4243085624 scopus 로고    scopus 로고
    • Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification
    • Lippman Z., et al. Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification. PLoS Biol. 1:2003;E67
    • (2003) PLoS Biol , vol.1 , pp. 67
    • Lippman, Z.1
  • 56
    • 0035212395 scopus 로고    scopus 로고
    • Silencing of transposable elements in plants
    • Okamoto H., Hirochika H. Silencing of transposable elements in plants. Trends Plant Sci. 6:2001;527-534
    • (2001) Trends Plant Sci. , vol.6 , pp. 527-534
    • Okamoto, H.1    Hirochika, H.2
  • 57
    • 0034596989 scopus 로고    scopus 로고
    • Transcriptional silencing and promoter methylation triggered by double-stranded RNA
    • Mette M.F., et al. Transcriptional silencing and promoter methylation triggered by double-stranded RNA. EMBO J. 19:2000;5194-5201
    • (2000) EMBO J. , vol.19 , pp. 5194-5201
    • Mette, M.F.1
  • 58
    • 0035916831 scopus 로고    scopus 로고
    • Transcriptional and posttranscriptional gene silencing are mechanistically related
    • Sijen T., et al. Transcriptional and posttranscriptional gene silencing are mechanistically related. Curr. Biol. 11:2001;436-440
    • (2001) Curr. Biol. , vol.11 , pp. 436-440
    • Sijen, T.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.