Functional redundancy of the duplex telomeric DNA-binding proteins in Arabidopsis

Botanical Bulletin of Academia Sinica

Volumn 46, Issue 4, 2005, Pages 315-324

  Chen, Chung Mong ^a   Wang, Chi Ting ^a   Kao, Yu Hsin ^a   Chang, Geen Dong ^b   Ho, Chia Hsing ^b   Lee, Feng Ming ^b   Hseu, Ming Jhy ^c  

^a INSTITUTE OF PLANT AND MICROBIAL BIOLOGY   (Taiwan)

^b NATIONAL TAIWAN UNIVERSITY   (Taiwan)

^c INSTITUTE OF BIOLOGICAL CHEMISTRY   (Taiwan)

Author keywords

Alternative splicing; Arabidopsis thaliana; Functional redundancy; Knockout mutant; Telomere length; Telomeric DNA binding protein

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 27944433025     PISSN: 00068063     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (40)

1. Allshire, R.C., M. Dempster, and N.D. Hastie. 1989. Human telomeres contain at least three types of G-rich repeats distributed non-randomly. Nucleic Acids Res. 17: 4611-4627.
2. Bianchi, A., S. Smith, L. Chong, P. Elias, and T. de Lange. 1997. TRF1 is a dimer and bends telomeric DNA. EMBO J. 16: 1785-1794.
3. Bilaud, T., C. Brun, K. Ancelin, C. E. Koering, T. Laroche, and E. Gilson. 1997. Telomeric localization of TRF2, a novel human telobox protein. Nat. Genet. 17: 236-239.
4. Blackburn, E.H. 2001. Switching and signaling at the telomere. Cell 106: 661-673.
5. Broccoli, D., A. Smogorzewska, L. Chong, and T. de Lange. 1997. Human telomeres contain two distinct Myb-related proteins, TRF1 and TRF2. Nat. Genet. 17: 231-235.
6. Buchberger, A. 2002. From UBA to UBX: new words in the ubiquitin vocabulary. Tends Cell Biol. 12: 216-221.
7. Chang, W., J.N. Dynek, and S. Smith. 2003. TRF1 is degraded by ubiquitin-mediated proteolysis after release from telomeres. Gene. Dev. 17: 1328-1333.
8. Chen, C.M., C.T. Wang, and C.H. Ho. 2001. A plant gene encoding a Myb-like protein that binds telomeric GGTTTAG repeats in vitro. J. Biol. Chem. 276: 16511-16519.
9. Chen, C.M., C.T. Wang, C.J. Wang, C.H. Ho, Y.Y. Kao, and C. C. Chen. 1997. Two tandemly repeated telomere-associated sequences in Nicotiana plumbaginifolia. Chromosome Res. 5: 561-568.
10. Chong, L., B. van Steensel, D. Broccoli, H. Erdjument-Bromage, J. Hanish, P. Tempst, and T. de Lange. 1995. A human telomeric protein. Science 270: 1663-1667.
11. Cooper, J.P., E.R. Nimmo, R.C. Allshire, and T. R. Cech. 1997. Regulation of telomere length and function by a Myb-domain protein in fission yeast. Nature 385: 744-747.
12. Cooper, J.P., Y. Watanabe, and P. Nurse. 1998. Fission yeast Taz1 protein is required for meiotic telomere clustering and recombination. Nature 392: 828-831.
13. Da Costa e Silva, O., L. Klein, E. Schmelzer, G.F. Trezzini, and K. Hahlbrock. 1993. BPF-1, a pathogen-induced DNA-binding protein involved in the plant defense response. Plant J. 4: 125-135.
14. Fairal, L., L. Chapman, H. Moss, T. de Lange, and D. Rhodes. 2001. Structure of the TRFH dimerization domain of the human telomeric proteins TRF1 and TRF2. Mol. Cell 8: 351-361.
15. Griffith, J., A. Bianchi, and T. de Lange. 1998. TRF1 promotes parallel pairing of telomeric tracts in vitro. J. Mol. Biol. 278: 79-88.
16. Griffith, J.D., L. Comeau, S. Rosenfield, R.M. Stansel, A. Bianchi, H. Moss, and T. de Lange. 1999. Mammalian telomeres end in a large duplex loop. Cell 97: 503-514.
17. Hwang, M.G., I.K. Chung, B.G. Kang, and M.H. Cho. 2001. Sequence-specific binding property of Arabidopsis thaliana telomeric DNA binding protein 1 (AtTBP1). FEBS Lett. 503: 35-40.
18. Karamysheva, Z.N., Y. V. Surovtseva, L. Vespa, E.V. Shakirov, and D.E. Shippen. 2004. A C-terminal Myb extension domain defines a novel family of double-strand telomeric DNA-binding proteins in Arabidopsis. J. Biol. Chem. 279: 47799-47807.
19. Kishi, S., X.Z. Zhou, Y. Ziv, C. Khoo, D.E. Hill, Y. Shiloh, and K.P. Lu. 2001. Telomeric protein Pin2/TRF1 as an important ATM target in response to double strand DNA breaks. J. Biol. Chem. 276: 29282-29291.
20. König, P., R. Giraldo, L. Chapman, and D. Rhodes. 1996. The crystal structure of the DNA-binding domain of yeast RAP1 in complex with telomeric DNA. Cell 85: 125-136.
21. Kopczak, S.D., N.A. Haas, P. J. Hussey, C.D. Silflow, and D. P. Snustad. 1992. The small genome of Arabidopsis contains at least six expressed α-tubulin genes. Plant Cell 4: 539-547.
22. Kyrion, G., K.A. Boakye, and A.J. Lustig. 1992. C-terminal truncation of RAP1 results in the deregulation of telomere size, stability, and function in Saccharomyces cerevisiae. Mol. Cell. Biol. 12: 5159-5173.
23. Krysan, P.J., J.C. Young, and M.R. Sussman. 1999. T-DNA as an insertional mutagen in Arabidopsis. Plant Cell 11: 2283-2290.
24. Levy, D.L. and E.H. Blackburn. 2004. Counting of Rif1p and Rif2p on Saccharomyces cerevisiae telomeres regulates telomere length. Mol. Cell. Biol. 24: 10857-10867.
25. Lugert, T. and W. Werr. 1994. A novel DNA-binding domain in the Shrunken initiator-binding protein (IBP1). Plant Mol. Biol. 25: 493-506.
26. Marcand, S., E. Gilson, and D. Shore. 1997. A protein-counting mechanism for telomere length regulation in yeast. Science 275: 986-990.
27. McKinney, E.C., N. Ali, A. Traut, K.A. Feldmann, D.A. Belostotsky, J.M. McDowell, and R.B. Meagher. 1995. Sequence-based identification of T-DNA insertion mutations in Arabidopsis: actin mutants act2-1 and act4-1. Plant J. 8: 613-622.
28. Melchior, F. 2000. SUMO-nonclassical ubiquitin. Ann. Rev. Cell Dev. Biol. 16: 591-626.
29. Murashige, T. and F. Skoog. 1962. A revised medium for the growth and bioassay with tobacco tissue culture. Physiol. Plant. 15: 473-497.
30. Shakirov, E.V. and D.E. Shippen. 2004. Length regulation and dynamics of individual telomere tracts in wild-type Arabidopsis. Plant Cell 16: 1959-1967.
31. Shien, M., C. Haggblom, M. Vogt, T. Hunter, and K.P. Lu. 1997. Characterization and cell cycle regulation of the related human telomeric proteins Pin2 and TRF1 suggest a role in mitosis. Proc. Nat. Acad. Sci. USA 94: 13618-13623.
32. Smogorzewska, A. and T. de Lange. 2004. Regulation of telomerase by telomeric proteins. Ann. Rev. Biochem. 73: 177-208.
33. Tanaka, K., J. Nishide, K. Okazaki, H. Kato, O. Niwa, T. Nakagawa, H. Matsuda, M. Kawamukai, and Y. Murakami. 1999. Characterization of a fission yeast SUMO-1 homologue, Pmt3p, required for multiple nuclear events, including the control of telomere length and chromosome segregation. Mol. Cell. Biol. 19: 8660-8672.
34. Tomaska, L., S. Willcox, J. Slezakova, J. Nosek, and J. D. Griffith. 2004. Taz1 binding to a fission yeast model telomere. J. Biol. Chem. 279: 50764-50772.
35. Van Steensel, B. and T. de Lange. 1997. Control of telomere length by the human telomeric protein TRF1. Nature 385: 740-743.
36. Van Steensel, B., A. Smogorzewska, and T. de Lange. 1998. TRF2 protects human telomeres from end-to-end fusion. Cell 92: 401-413.
37. Vega, L. R., M.K. Mateyak, and V.A. Zakian. 2003. Getting to the end: telomerase access in yeast and humans. Nat. Rev. Mol. Cell. Biol. 4: 948-959.
38. Yang, S.W., D.H. Kim, J.J. Lee, Y.J. Chun, J.H. Lee, Y.J. Kim, I.K. Chung, and W.T. Kim. 2003. Expression of the telomeric repeat binding factor gene NgTRF1 is closely coordinated with the cell division program in tobacco BY-2 suspension culture cells. J. Biol. Chem. 278: 21395-21407.
39. Yu, E.Y., S.E. Kim, J. H. Kim, J.H. Ko, M.H. Cho, and I.K. Chung. 2000. Sequence-specific DNA recognition by the Myb-like domain of plant telomeric protein RTBP1. J. Biol. Chem. 275: 24208-24214.
40. Zhao, X. and G. Blobel. 2005. A SUMO ligase is part of a nuclear multiprotein complex that affects DNA repair and chromosomal organization. Proc. Nat. Acad. Sci. USA 102: 4777-4782.