-
1
-
-
8844277626
-
Analyzing time series gene expression data
-
Z. Bar-Joseph Analyzing time series gene expression data Bioinformatics 20 2004 2493 2503
-
(2004)
Bioinformatics
, vol.20
, pp. 2493-2503
-
-
Bar-Joseph, Z.1
-
2
-
-
0037458085
-
Microarrays: The use of oligonucleotides and cDNA for the analysis of gene expression
-
J.C. Barrett, and E.S. Kawasaki Microarrays: the use of oligonucleotides and cDNA for the analysis of gene expression Drug Discov. Today 8 2003 134 141
-
(2003)
Drug Discov. Today
, vol.8
, pp. 134-141
-
-
Barrett, J.C.1
Kawasaki, E.S.2
-
3
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Y. Benjamini, and Y. Hochberg Controlling the false discovery rate: a practical and powerful approach to multiple testing J. Roy. Stat. Soc., Ser. B 57 1995 289 300
-
(1995)
J. Roy. Stat. Soc., Ser. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
4
-
-
0034730161
-
Building a dictionary for genomes: Identification of presumptive regulatory sites by statistical analysis
-
H.J. Bussemaker, H. Li, and E.D. Siggia Building a dictionary for genomes: identification of presumptive regulatory sites by statistical analysis Proc. Natl. Acad. Sci. U.S.A. 97 2000 10096 10100
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 10096-10100
-
-
Bussemaker, H.J.1
Li, H.2
Siggia, E.D.3
-
5
-
-
0034526621
-
Microarray expression profiling identifies genes with altered expression in HDL-deficient mice
-
M.J. Callow, S. Dudoit, E.L. Gong, T.P. Speed, and E.M. Rubin Microarray expression profiling identifies genes with altered expression in HDL-deficient mice Genome Res. 10 2000 2022 2029
-
(2000)
Genome Res.
, vol.10
, pp. 2022-2029
-
-
Callow, M.J.1
Dudoit, S.2
Gong, E.L.3
Speed, T.P.4
Rubin, E.M.5
-
6
-
-
0842330097
-
The operons, a criterion to compare the reliability of transcriptome analysis tools: ICA is more reliable than ANOVA, PLS and PCA
-
A.-S. Carpentier, A. Riva, P. Tisseur, G. Didier, and A. Hénaut The operons, a criterion to compare the reliability of transcriptome analysis tools: ICA is more reliable than ANOVA, PLS and PCA Comput. Biol. Chem. 28 2004 3 10
-
(2004)
Comput. Biol. Chem.
, vol.28
, pp. 3-10
-
-
Carpentier, A.-S.1
Riva, A.2
Tisseur, P.3
Didier, G.4
Hénaut, A.5
-
7
-
-
3142715303
-
Analysis of variance components in gene expression data
-
J. Chen, R. Delongchamp, C.-A. Tsai, H.-M. Hsueh, F. Sistare, K.L. Thompson, V.G. Desai, and J.C. Fuscoe Analysis of variance components in gene expression data Bioinformatics 20 2004 1436 1446
-
(2004)
Bioinformatics
, vol.20
, pp. 1436-1446
-
-
Chen, J.1
Delongchamp, R.2
Tsai, C.-A.3
Hsueh, H.-M.4
Sistare, F.5
Thompson, K.L.6
Desai, V.G.7
Fuscoe, J.C.8
-
8
-
-
12844264782
-
Blind source separation and the analysis of microarray data
-
P. Chiappetta, M.C. Roubaud, and B. Torrésani Blind source separation and the analysis of microarray data J. Comput. Biol. 11 2004 1090 1109
-
(2004)
J. Comput. Biol.
, vol.11
, pp. 1090-1109
-
-
Chiappetta, P.1
Roubaud, M.C.2
Torrésani, B.3
-
9
-
-
3042595019
-
Analysing microarray data using modular regulation analysis
-
R.K. Curtis, and M.D. Brand Analysing microarray data using modular regulation analysis Bioinformatics 20 2004 1272 1284
-
(2004)
Bioinformatics
, vol.20
, pp. 1272-1284
-
-
Curtis, R.K.1
Brand, M.D.2
-
10
-
-
0037342510
-
Comparisons and validation of statistical clustering techniques for microarray gene expression data
-
S. Datta, and S. Datta Comparisons and validation of statistical clustering techniques for microarray gene expression data Bioinformatics 19 2003 459 466
-
(2003)
Bioinformatics
, vol.19
, pp. 459-466
-
-
Datta, S.1
Datta, S.2
-
11
-
-
0035084921
-
Watching the hands of the Arabidopsis biological clock
-
S.J. Davis, and A.J. Millar Watching the hands of the Arabidopsis biological clock Genome Biol. 2 2001 e-pub
-
(2001)
Genome Biol.
, vol.2
-
-
Davis, S.J.1
Millar, A.J.2
-
12
-
-
0036080361
-
Adaptive quality-based clustering of gene expression profiles
-
F. De Smet, J. Mathys, K. Marchal, G. Thijs, B. De Moor, and Y. Moreau Adaptive quality-based clustering of gene expression profiles Bioinformatics 18 2002 735 746
-
(2002)
Bioinformatics
, vol.18
, pp. 735-746
-
-
De Smet, F.1
Mathys, J.2
Marchal, K.3
Thijs, G.4
De Moor, B.5
Moreau, Y.6
-
13
-
-
0037255041
-
Evolutionary algorithms for finding optimal gene sets in microarray prediction
-
J.M. Deutsch Evolutionary algorithms for finding optimal gene sets in microarray prediction Bioinformatics 19 2003 45 52
-
(2003)
Bioinformatics
, vol.19
, pp. 45-52
-
-
Deutsch, J.M.1
-
14
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
M.B. Eisen, P.T. Spellman, P.O. Brown, and D. Botstein Cluster analysis and display of genome-wide expression patterns PNAS 95 1998 14863 14868
-
(1998)
PNAS
, vol.95
, pp. 14863-14868
-
-
Eisen, M.B.1
Spellman, P.T.2
Brown, P.O.3
Botstein, D.4
-
15
-
-
0024554488
-
Multi-analyse immunoassay
-
R.P. Ekins Multi-analyse immunoassay J. Pharm. Biomed. Anal. 7 1989 155 168
-
(1989)
J. Pharm. Biomed. Anal.
, vol.7
, pp. 155-168
-
-
Ekins, R.P.1
-
16
-
-
0025689821
-
Multispot, multianalyte, immunoassay
-
R.P. Ekins, F. Chu, and E. Biggart Multispot, multianalyte, immunoassay Ann. Biol. Clin. (Paris) 48 1990 655 666
-
(1990)
Ann. Biol. Clin. (Paris)
, vol.48
, pp. 655-666
-
-
Ekins, R.P.1
Chu, F.2
Biggart, E.3
-
17
-
-
0026347009
-
Multianalyse microspot immunoassay - Microanalytical "compact disk" of the future
-
R.P. Ekins, and F.W. Chu Multianalyse microspot immunoassay - microanalytical "compact disk" of the future Clin. Chem. 37 1991 1955 1967
-
(1991)
Clin. Chem.
, vol.37
, pp. 1955-1967
-
-
Ekins, R.P.1
Chu, F.W.2
-
19
-
-
0026108692
-
Light-directed, spatially addressable parallel chemical synthesis
-
S.P. Fodor, J.L. Read, M.C. Pirrung, L. Stryer, A.T. Lu, and D. Solas Light-directed, spatially addressable parallel chemical synthesis Science 251 1991 767 773
-
(1991)
Science
, vol.251
, pp. 767-773
-
-
Fodor, S.P.1
Read, J.L.2
Pirrung, M.C.3
Stryer, L.4
Lu, A.T.5
Solas, D.6
-
20
-
-
0032729435
-
Exploring expression data: Identification and analysis of coexpressed genes
-
L.J. Heyer, S. Kruglyak, and S. Yooseph Exploring expression data: identification and analysis of coexpressed genes Genome Res. 9 1999 1106 1115
-
(1999)
Genome Res.
, vol.9
, pp. 1106-1115
-
-
Heyer, L.J.1
Kruglyak, S.2
Yooseph, S.3
-
21
-
-
3042750616
-
Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana
-
M.Y. Hirai, M. Yano, D. Goodenowe, S. Kanaya, T. Kimura, M. Awazuhara, M. Arita, T. Fujiwara, and K. Saito Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana PNAS 101 2004 10205 10210
-
(2004)
PNAS
, vol.101
, pp. 10205-10210
-
-
Hirai, M.Y.1
Yano, M.2
Goodenowe, D.3
Kanaya, S.4
Kimura, T.5
Awazuhara, M.6
Arita, M.7
Fujiwara, T.8
Saito, K.9
-
23
-
-
0036738906
-
Determination of minimum sample size and discriminatory expression patterns in microarray data
-
D. Hwang, W. Schmitt, G. Stephanopoulos, and G. Stephanopoulos Determination of minimum sample size and discriminatory expression patterns in microarray data Bioinformatics 18 2002 1184 1193
-
(2002)
Bioinformatics
, vol.18
, pp. 1184-1193
-
-
Hwang, D.1
Schmitt, W.2
Stephanopoulos, G.3
Stephanopoulos, G.4
-
24
-
-
0042826822
-
Independent component analysis: Algorithms and applications
-
A. Hyvärinen, and E. Oja Independent component analysis: algorithms and applications Neural Networks 13 2000 411 430
-
(2000)
Neural Networks
, vol.13
, pp. 411-430
-
-
Hyvärinen, A.1
Oja, E.2
-
25
-
-
85182493459
-
Novel approaches to gene expression analysis of active polyarticular juvenile rheumatoid arthritis
-
J. Jarvis, I. Dozmorov, K. Jiang, M.B. Frank, P. Szodoray, P. Alex, and M. Centola Novel approaches to gene expression analysis of active polyarticular juvenile rheumatoid arthritis Arthritis Res. Ther. 6 2004 R15 R32
-
(2004)
Arthritis Res. Ther.
, vol.6
-
-
Jarvis, J.1
Dozmorov, I.2
Jiang, K.3
Frank, M.B.4
Szodoray, P.5
Alex, P.6
Centola, M.7
-
26
-
-
13244289883
-
Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes
-
H. Jiang, Y. Deng, H.-S. Chen, L. Tao, Q. Sha, J. Chen, C.-J. Tsai, and S. Zhang Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes BMC Bioinformatics 5 2004 81 e-pub
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 81
-
-
Jiang, H.1
Deng, Y.2
Chen, H.-S.3
Tao, L.4
Sha, Q.5
Chen, J.6
Tsai, C.-J.7
Zhang, S.8
-
27
-
-
0037464973
-
Functional genomics and gene microarrays - The use in research and clinical medicine
-
L. Joos, E. Eryuksel, and M.H. Brutsche Functional genomics and gene microarrays - the use in research and clinical medicine Swiss Med. Wkly. 133 2003 31 38
-
(2003)
Swiss Med. Wkly.
, vol.133
, pp. 31-38
-
-
Joos, L.1
Eryuksel, E.2
Brutsche, M.H.3
-
28
-
-
0036962610
-
Historical background and anticipated developments
-
B. Jordan Historical background and anticipated developments Ann. NY Acad. Sci. 975 2002 24 32
-
(2002)
Ann. NY Acad. Sci.
, vol.975
, pp. 24-32
-
-
Jordan, B.1
-
29
-
-
2942522853
-
Trustworthiness and metrics in visualizing similarity of gene expression
-
S. Kaski, J. Nikkilä, M. Oja, J. Venna, P. Törönen, and E. Castrén Trustworthiness and metrics in visualizing similarity of gene expression BMC Bioinformatics 4 2003 48 e-pub
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 48
-
-
Kaski, S.1
Nikkilä, J.2
Oja, M.3
Venna, J.4
Törönen, P.5
Castrén, E.6
-
31
-
-
0035032570
-
Statistical design and the analysis of gene expression microarray data
-
K. Kerr, and G. Churchill Statistical design and the analysis of gene expression microarray data Genet. Res. 77 2001 123 128
-
(2001)
Genet. Res.
, vol.77
, pp. 123-128
-
-
Kerr, K.1
Churchill, G.2
-
32
-
-
0034927555
-
Analysis of variance for gene expression microarray data
-
K. Kerr, M. Martin, and G. Churchill Analysis of variance for gene expression microarray data J. Comput. Biol. 7 2000 819 837
-
(2000)
J. Comput. Biol.
, vol.7
, pp. 819-837
-
-
Kerr, K.1
Martin, M.2
Churchill, G.3
-
33
-
-
13244298228
-
Reuse of imputed data in microarray analysis increases imputation efficiency
-
K.-Y. Kim, B.-J. Kim, and G.-S. Yi Reuse of imputed data in microarray analysis increases imputation efficiency BMC Bioinformatics 5 2004 160 e-pub
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 160
-
-
Kim, K.-Y.1
Kim, B.-J.2
Yi, G.-S.3
-
34
-
-
2942542735
-
Three-parameter lognormal distribution ubiquitously found in cDNA microarray data and its application to parametric data treatment
-
T. Konishi Three-parameter lognormal distribution ubiquitously found in cDNA microarray data and its application to parametric data treatment BMC Bioinformatics 5 2004 5 e-pub
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 5
-
-
Konishi, T.1
-
35
-
-
1342309217
-
Advanced significance analysis of microarray data based on weighted resampling: A comparative study and application to gene deletions in Mycobacterium bovis
-
Z. Kutalik, J. Inwald, S.V. Gordon, R.G. Hewinson, P. Bucher, J. Hinds, K.-H. Cho, and O. Wokenhauer Advanced significance analysis of microarray data based on weighted resampling: a comparative study and application to gene deletions in Mycobacterium bovis Bioinformatics 20 2004 357 363
-
(2004)
Bioinformatics
, vol.20
, pp. 357-363
-
-
Kutalik, Z.1
Inwald, J.2
Gordon, S.V.3
Hewinson, R.G.4
Bucher, P.5
Hinds, J.6
Cho, K.-H.7
Wokenhauer, O.8
-
36
-
-
1542714899
-
Reducing the variability in cDNA microarray image processing by Bayesian inference
-
N. Lawrence, M. Milo, M. Niranjan, P. Rashbass, and S. Soullier Reducing the variability in cDNA microarray image processing by Bayesian inference Bioinformatics 20 2004 518 526
-
(2004)
Bioinformatics
, vol.20
, pp. 518-526
-
-
Lawrence, N.1
Milo, M.2
Niranjan, M.3
Rashbass, P.4
Soullier, S.5
-
37
-
-
3042514191
-
Coexpression analysis of human genes across many microarray data sets
-
H. Lee, A. Hsu, J. Sajdak, J. Qin, and P. Pavlidis Coexpression analysis of human genes across many microarray data sets Genome Res. 14 2004 1085 1094
-
(2004)
Genome Res.
, vol.14
, pp. 1085-1094
-
-
Lee, H.1
Hsu, A.2
Sajdak, J.3
Qin, J.4
Pavlidis, P.5
-
38
-
-
0036166753
-
Linear modes of gene expression determined by independent component analysis
-
W. Liebermeister Linear modes of gene expression determined by independent component analysis Bioinformatics 18 2002 51 60
-
(2002)
Bioinformatics
, vol.18
, pp. 51-60
-
-
Liebermeister, W.1
-
40
-
-
2442704146
-
Profound influence of microarray scanner characteristics on gene expression ratios: Analysis and procedure for correction
-
J. Lyng, A. Badiee, D. Svendsrud, E. Hovig, O. Myklebost, and T. Stokke Profound influence of microarray scanner characteristics on gene expression ratios: analysis and procedure for correction BMC Genomics 5 2004 10 e-pub
-
(2004)
BMC Genomics
, vol.5
, pp. 10
-
-
Lyng, J.1
Badiee, A.2
Svendsrud, D.3
Hovig, E.4
Myklebost, O.5
Stokke, T.6
-
41
-
-
12244298864
-
A decomposition model to track gene expression signatures: Preview on observer-independent classification of ovarian cancer
-
A.-M. Martoglio, J. Miskin, S. Smith, and D. MacKay A decomposition model to track gene expression signatures: preview on observer-independent classification of ovarian cancer Bioinformatics 18 2002 1617 1624
-
(2002)
Bioinformatics
, vol.18
, pp. 1617-1624
-
-
Martoglio, A.-M.1
Miskin, J.2
Smith, S.3
MacKay, D.4
-
43
-
-
0037220825
-
DNA replication: Telling time with microarrays
-
H.J. McCune, and A.D. Donaldson DNA replication: telling time with microarrays Genome Biol. 4 2003 204 e-pub
-
(2003)
Genome Biol.
, vol.4
, pp. 204
-
-
McCune, H.J.1
Donaldson, A.D.2
-
44
-
-
12344269956
-
The Baumgartner-Weiß-Schindler test for the detection of differentially expressed genes in replicated microarray experiments
-
M. Neuhäuser, and R. Senske The Baumgartner-Weiß-Schindler test for the detection of differentially expressed genes in replicated microarray experiments Bioinformatics 20 2004 3553 3564
-
(2004)
Bioinformatics
, vol.20
, pp. 3553-3564
-
-
Neuhäuser, M.1
Senske, R.2
-
45
-
-
0242643743
-
A Bayesian missing value estimation method for gene expression profile data
-
S. Oba, M.-A. Sato, I. Takemasa, M. Monden, K.-I. Matsubara, and S. Ishii A Bayesian missing value estimation method for gene expression profile data Bioinformatics 19 2003 2088 2096
-
(2003)
Bioinformatics
, vol.19
, pp. 2088-2096
-
-
Oba, S.1
Sato, M.-A.2
Takemasa, I.3
Monden, M.4
Matsubara, K.-I.5
Ishii, S.6
-
46
-
-
0036366541
-
Genome-wide analysis of deoxyadenosine methyltransferase-mediated control of gene expression in Escherichia coli
-
T. Oshima, C. Wade, Y. Kawagoe, T. Ara, M. Maeda, Y. Masuda, S. Hiraga, and H. Mori Genome-wide analysis of deoxyadenosine methyltransferase-mediated control of gene expression in Escherichia coli Mol. Microbiol. 45 2002 673 695
-
(2002)
Mol. Microbiol.
, vol.45
, pp. 673-695
-
-
Oshima, T.1
Wade, C.2
Kawagoe, Y.3
Ara, T.4
Maeda, M.5
Masuda, Y.6
Hiraga, S.7
Mori, H.8
-
47
-
-
2342426727
-
Gaussian mixture clustering and imputation of microarray data
-
M. Ouyang, W.J. Welsh, and P. Georgopoulos Gaussian mixture clustering and imputation of microarray data Bioinformatics 20 2004 917 923
-
(2004)
Bioinformatics
, vol.20
, pp. 917-923
-
-
Ouyang, M.1
Welsh, W.J.2
Georgopoulos, P.3
-
48
-
-
0036956224
-
Comparing expression profiles of genes with similar promoter regions
-
P.J. Park, A.J. Butt, and I.S. Kohane Comparing expression profiles of genes with similar promoter regions Bioinformatics 18 2002 1576 1584
-
(2002)
Bioinformatics
, vol.18
, pp. 1576-1584
-
-
Park, P.J.1
Butt, A.J.2
Kohane, I.S.3
-
49
-
-
4444293492
-
A novel approach for increasing sensitivity and correcting saturation artifacts of radioactively labeled cDNA arrays
-
T. Querec, R. Stoyanova, E. Ross, and C. Patriotis A novel approach for increasing sensitivity and correcting saturation artifacts of radioactively labeled cDNA arrays Bioinformatics 20 2004 1955 1961
-
(2004)
Bioinformatics
, vol.20
, pp. 1955-1961
-
-
Querec, T.1
Stoyanova, R.2
Ross, E.3
Patriotis, C.4
-
50
-
-
9444231671
-
Biologically meaningful expression profiling across species using heterologous hybridization to a cDNA microarray
-
S. Renn, N. Aubin-Horth, and H. Hofmann Biologically meaningful expression profiling across species using heterologous hybridization to a cDNA microarray BMC Genomics 5 2004 42 e-pub
-
(2004)
BMC Genomics
, vol.5
, pp. 42
-
-
Renn, S.1
Aubin-Horth, N.2
Hofmann, H.3
-
51
-
-
2342565019
-
The difficult interpretation of transcriptome data: The case of the GATC regulatory network
-
A. Riva, M.-O. Delorme, T. Chevalier, N. Guilhot, C. Henaut, and A. Henaut The difficult interpretation of transcriptome data: the case of the GATC regulatory network Comput. Biol. Chem. 28 2004 109 118
-
(2004)
Comput. Biol. Chem.
, vol.28
, pp. 109-118
-
-
Riva, A.1
Delorme, M.-O.2
Chevalier, T.3
Guilhot, N.4
Henaut, C.5
Henaut, A.6
-
52
-
-
12244298154
-
Statistical analysis of high-density oligonucleotide arrays: A multiplicative noise model
-
R. Sasik, E. Calvo, and J. Corbeil Statistical analysis of high-density oligonucleotide arrays: a multiplicative noise model Bioinformatics 18 2002 1633 1640
-
(2002)
Bioinformatics
, vol.18
, pp. 1633-1640
-
-
Sasik, R.1
Calvo, E.2
Corbeil, J.3
-
53
-
-
0028806048
-
Quantitative monitoring of gene expression patterns with a complementary DNA microarray
-
M. Schena, D. Shalon, R.W. Davis, and P.O. Brown Quantitative monitoring of gene expression patterns with a complementary DNA microarray Science 270 1995 467 470
-
(1995)
Science
, vol.270
, pp. 467-470
-
-
Schena, M.1
Shalon, D.2
Davis, R.W.3
Brown, P.O.4
-
54
-
-
17544393481
-
Extracting biological information from DNA arrays: An unexpected link between arginine and methionine metabolism in Bacillus subtilis
-
A. Sekowska, S. Robin, J.J. Daudin, A. Henaut, and A. Danchin Extracting biological information from DNA arrays: an unexpected link between arginine and methionine metabolism in Bacillus subtilis Genome Biol. 2 2001 Research 0019, e-pub
-
(2001)
Genome Biol.
, vol.2
-
-
Sekowska, A.1
Robin, S.2
Daudin, J.J.3
Henaut, A.4
Danchin, A.5
-
55
-
-
20044395334
-
Prognostic meta-signature of breast cancer developed by two-stage mixture modeling of microarray data
-
R. Shen, D. Ghosh, and A.M. Chinnaiyan Prognostic meta-signature of breast cancer developed by two-stage mixture modeling of microarray data BMC Genomics 5 2004 94
-
(2004)
BMC Genomics
, vol.5
, pp. 94
-
-
Shen, R.1
Ghosh, D.2
Chinnaiyan, A.M.3
-
56
-
-
0042923097
-
Class prediction and discovery using gene microarray and proteomics mass spectroscopy data: Curses, caveats, cautions
-
R.L. Somorjai, B. Dolenko, and R. Baumgartner Class prediction and discovery using gene microarray and proteomics mass spectroscopy data: curses, caveats, cautions Bioinformatics 19 2003 1484 1491
-
(2003)
Bioinformatics
, vol.19
, pp. 1484-1491
-
-
Somorjai, R.L.1
Dolenko, B.2
Baumgartner, R.3
-
57
-
-
4444226267
-
Inferring dynamic architecture of cellular networks using time series of gene expression, protein and metabolite data
-
E. Sontag, A. Kiyatkin, and B. Kholodenko Inferring dynamic architecture of cellular networks using time series of gene expression, protein and metabolite data Bioinformatics 20 2004 1877 1886
-
(2004)
Bioinformatics
, vol.20
, pp. 1877-1886
-
-
Sontag, E.1
Kiyatkin, A.2
Kholodenko, B.3
-
58
-
-
0026742791
-
Analyzing and comparing nucleic acid sequences by hybridization to arrays of oligonucleotides: Evaluation using experimental models
-
E.M. Southern, U. Maskos, and J.K. Elder Analyzing and comparing nucleic acid sequences by hybridization to arrays of oligonucleotides: evaluation using experimental models Genomics 13 1992 1008 1017
-
(1992)
Genomics
, vol.13
, pp. 1008-1017
-
-
Southern, E.M.1
Maskos, U.2
Elder, J.K.3
-
59
-
-
0037222563
-
Genetic analysis of the circadian system in Drosophila melanogaster and mammals
-
R. Stanewsky Genetic analysis of the circadian system in Drosophila melanogaster and mammals J. Neurobiol. 54 2003 111 147
-
(2003)
J. Neurobiol.
, vol.54
, pp. 111-147
-
-
Stanewsky, R.1
-
60
-
-
15844413351
-
A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis
-
A. Statnikov, C.F. Aliferis, I. Tsamardinos, D. Hardin, and S. Levy A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis Bioinformatics 21 2005 631 643
-
(2005)
Bioinformatics
, vol.21
, pp. 631-643
-
-
Statnikov, A.1
Aliferis, C.F.2
Tsamardinos, I.3
Hardin, D.4
Levy, S.5
-
61
-
-
4444286925
-
Normalization of single-channel DNA array data by principal component analysis
-
R. Stoyanova, T. Querec, T. Brown, and C. Patriotis Normalization of single-channel DNA array data by principal component analysis Bioinformatics 20 2004 1772 1784
-
(2004)
Bioinformatics
, vol.20
, pp. 1772-1784
-
-
Stoyanova, R.1
Querec, T.2
Brown, T.3
Patriotis, C.4
-
62
-
-
0036532511
-
Protein microarray technology
-
M.F. Templin, D. Stoll, M. Schrenk, P.C. Traub, C.F. Vohringer, and T.O. Joos Protein microarray technology Trends Biotechnol. 20 2002 160 166
-
(2002)
Trends Biotechnol.
, vol.20
, pp. 160-166
-
-
Templin, M.F.1
Stoll, D.2
Schrenk, M.3
Traub, P.C.4
Vohringer, C.F.5
Joos, T.O.6
-
63
-
-
13244299122
-
Comparing transformation methods for DNA microarray data
-
H. Thygesen, and A. Zwinderman Comparing transformation methods for DNA microarray data BMC Bioinformatics 5 2004 77 e-pub
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 77
-
-
Thygesen, H.1
Zwinderman, A.2
-
64
-
-
9144259344
-
Gene expression variation between mouse inbred strains
-
R. Turk, P.A. t'Hoen, E. Sterrenburg, R.X. de Menezes, E.J. de Meijer, J.M. Boer, G.-J.B. van Ommen, and J.T. den Dunnen Gene expression variation between mouse inbred strains BMC Genomics 5 2004 57 e-pub
-
(2004)
BMC Genomics
, vol.5
, pp. 57
-
-
Turk, R.1
T'Hoen, P.A.2
Sterrenburg, E.3
De Menezes, R.X.4
De Meijer, E.J.5
Boer, J.M.6
Van Ommen, G.-J.B.7
Den Dunnen, J.T.8
-
65
-
-
0035942271
-
Significance analysis of microarrays applied to the ionizing radiation response
-
V. Tusher, R. Tibshirani, and G. Chu Significance analysis of microarrays applied to the ionizing radiation response PNAS 98 2001 5116 5121
-
(2001)
PNAS
, vol.98
, pp. 5116-5121
-
-
Tusher, V.1
Tibshirani, R.2
Chu, G.3
-
66
-
-
0035021993
-
Bioinformatics needs to adopt statistical thinking
-
M. Vingron Bioinformatics needs to adopt statistical thinking Bioinformatics 17 2001 389 390
-
(2001)
Bioinformatics
, vol.17
, pp. 389-390
-
-
Vingron, M.1
-
67
-
-
0038715737
-
Use of microarray technologies in toxicology research
-
K.E. Vrana, W.M. Freeman, and M. Aschner Use of microarray technologies in toxicology research Neurotoxicology 24 2003 321 332
-
(2003)
Neurotoxicology
, vol.24
, pp. 321-332
-
-
Vrana, K.E.1
Freeman, W.M.2
Aschner, M.3
-
68
-
-
16344391539
-
Variation in tissue-specific gene expression among natural populations
-
A. Whitehead, and D.L. Crawford Variation in tissue-specific gene expression among natural populations Genome Biol. 6 2005 R13 e-pub
-
(2005)
Genome Biol.
, vol.6
-
-
Whitehead, A.1
Crawford, D.L.2
-
69
-
-
4844229238
-
From co-expression to co-regulation: How many microarray experiments do we need?
-
K.Y. Yeung, M. Medvedovic, and R. Bumgarner From co-expression to co-regulation: how many microarray experiments do we need? Genome Biol. 5 2004 R48 e-pub
-
(2004)
Genome Biol.
, vol.5
-
-
Yeung, K.Y.1
Medvedovic, M.2
Bumgarner, R.3
-
71
-
-
25444453725
-
An adaptive method for cDNA microarray normalization
-
Y. Zhao, M.-C. Li, and R. Simon An adaptive method for cDNA microarray normalization BMC Bioinformatics 6 2005 28 e-pub
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 28
-
-
Zhao, Y.1
Li, M.-C.2
Simon, R.3
-
72
-
-
0344033642
-
Missing-value estimation using linear and non-linear regression with Bayesian gene selection
-
X. Zhou, X. Wang, and E.R. Dougherty Missing-value estimation using linear and non-linear regression with Bayesian gene selection Bioinformatics 19 2003 2302 2307
-
(2003)
Bioinformatics
, vol.19
, pp. 2302-2307
-
-
Zhou, X.1
Wang, X.2
Dougherty, E.R.3
|