메뉴 건너뛰기




Volumn 2, Issue 6, 2001, Pages

Extracting biological information from DNA arrays: an unexpected link between arginine and methionine metabolism in Bacillus subtilis

Author keywords

Arginine Metabolism; Methionine; Methionine Sulfoxide; Sulfur Metabolism; Sulfur Source

Indexed keywords

5 METHYLTHIORIBOSE; 5-METHYLTHIORIBOSE; ARGININE; BACTERIAL RNA; CARRIER PROTEIN; DRUG DERIVATIVE; METHIONINE; METHIONINE SULFOXIDE; SULFUR; THIOGLYCOSIDE;

EID: 17544393481     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2001-2-6-research0019     Document Type: Article
Times cited : (52)

References (20)
  • 1
    • 0033615370 scopus 로고    scopus 로고
    • Identification of yrrU as the methylthioadenosine nucleosidase gene in Bacillus subtilis
    • PID: 10574451, COI: 1:CAS:528:DyaK1MXnt1ajsbw%3D
    • Sekowska A, Danchin A: Identification of yrrU as the methylthioadenosine nucleosidase gene in Bacillus subtilis. DNA Res. 1999, 6: 255-264. DOI: 10.1093/dnares/6.5.255
    • (1999) DNA Res , vol.6 , pp. 255-264
    • Sekowska, A.1    Danchin, A.2
  • 2
    • 0034576606 scopus 로고    scopus 로고
    • Expression profiling in reference bacteria: dreams and reality
    • Danchin A, Sekowska A: Expression profiling in reference bacteria: dreams and reality. GenomeBiology. 2000, 1: 1024.1-1024.5.
    • (2000) GenomeBiology , vol.1 , pp. 1024.1-1024.5
    • Danchin, A.1    Sekowska, A.2
  • 4
    • 0033995794 scopus 로고    scopus 로고
    • Sulfur metabolism in Escherichia coliand related bacteria: facts and fiction
    • PID: 10939241, COI: 1:CAS:528:DC%2BD3cXislWjurg%3D
    • Sekowska A, Kung HF, Danchin A: Sulfur metabolism in Escherichia coli and related bacteria: facts and fiction. J Mol Microbiol Biotechnol. 2000, 2: 145-177.
    • (2000) J Mol Microbiol Biotechnol , vol.2 , pp. 145-177
    • Sekowska, A.1    Kung, H.F.2    Danchin, A.3
  • 5
    • 0034969845 scopus 로고    scopus 로고
    • Sulfur-limitation-regulated proteins in Bacillus subtilis: a two-dimensional gel electrophoresis study
    • PID: 11390694, COI: 1:CAS:528:DC%2BD3MXkslSqtrs%3D
    • Coppee J-Y, Auger S, Turlin E, Sekowska A, Caer J-PL, Labas V, Vagner V, Danchin A, Martin-Verstraete I: Sulfur-limitation-regulated proteins in Bacillus subtilis: a two-dimensional gel electrophoresis study. Microbiology. 2001, 147: 1631-1640. DOI: 10.1099/00221287-147-6-1631
    • (2001) Microbiology , vol.147 , pp. 1631-1640
    • Coppee, J.-Y.1    Auger, S.2    Turlin, E.3    Sekowska, A.4    Caer, J.-P.L.5    Labas, V.6    Vagner, V.7    Danchin, A.8    Martin-Verstraete, I.9
  • 7
    • 0029074899 scopus 로고
    • A third periplasmic transport system for L-arginine in Escherichia coli: molecular characterization of the artPIQMJgenes, arginine binding and transport
    • PID: 8801422, COI: 1:CAS:528:DyaK2MXosVWksrg%3D
    • Wissenbach U, Six S, Bongaerts J, Ternes D, Steinwachs S, Unden G: A third periplasmic transport system for L-arginine in Escherichia coli: molecular characterization of the artPIQMJ genes, arginine binding and transport. Mol Microbiol. 1995, 17: 675-686. DOI: 10.1111/j.1365-2958.1995.mmi_17040675.x
    • (1995) Mol Microbiol , vol.17 , pp. 675-686
    • Wissenbach, U.1    Six, S.2    Bongaerts, J.3    Ternes, D.4    Steinwachs, S.5    Unden, G.6
  • 8
    • 0034733815 scopus 로고    scopus 로고
    • Sulphur islands in the Escherichia coligenome: markers of the cell's architecture?
    • PID: 10878240, COI: 1:CAS:528:DC%2BD3cXktlKqsLs%3D
    • Rocha EP, Sekowska A, Danchin A: Sulphur islands in the Escherichia coli genome: markers of the cell's architecture?. FEBS Lett. 2000, 476: 8-11. 10.1016/S0014-5793(00)01660-4. DOI: 10.1016/S0014-5793(00)01660-4
    • (2000) FEBS Lett , vol.476 , pp. 8-11
    • Rocha, E.P.1    Sekowska, A.2    Danchin, A.3
  • 9
    • 0029820872 scopus 로고    scopus 로고
    • rRNA transcription and growth rate-dependent regulation of ribosome synthesis in Escherichia coli
    • PID: 8905094, COI: 1:CAS:528:DyaK28XmtFGhtrk%3D
    • Gourse RL, Gaal T, Bartlett MS, Appleman JA, Ross W: rRNA transcription and growth rate-dependent regulation of ribosome synthesis in Escherichia coli. Annu Rev Microbiol. 1996, 50: 645-677. 10.1146/annurev.micro.50.1.645. DOI: 10.1146/annurev.micro.50.1.645
    • (1996) Annu Rev Microbiol , vol.50 , pp. 645-677
    • Gourse, R.L.1    Gaal, T.2    Bartlett, M.S.3    Appleman, J.A.4    Ross, W.5
  • 10
    • 0034703060 scopus 로고    scopus 로고
    • Global gene expression profiling in Escherichia coliK12. The effects of intergration host factor
    • PID: 10871608, COI: 1:CAS:528:DC%2BD3cXmvFKjtrY%3D
    • Arfin SM, Long AD, Ito ET, Tolleri L, Riehle MM, Paegle ES, Hatfield GW: Global gene expression profiling in Escherichia coli K12. The effects of intergration host factor. J Biol Chem. 2000, 275: 29672-29684. 10.1074/jbc.M002247200. DOI: 10.1074/jbc.M002247200
    • (2000) J Biol Chem , vol.275 , pp. 29672-29684
    • Arfin, S.M.1    Long, A.D.2    Ito, E.T.3    Tolleri, L.4    Riehle, M.M.5    Paegle, E.S.6    Hatfield, G.W.7
  • 11
    • 0022367326 scopus 로고
    • Fluoroaluminates activate transducin-GDP by mimicking the gamma-phosphate of GTP in its binding site
    • PID: 3863758, COI: 1:CAS:528:DyaL2MXmtV2htrg%3D
    • Bigay J, Deterre P, Pfister C, Chabre M: Fluoroaluminates activate transducin-GDP by mimicking the gamma-phosphate of GTP in its binding site. FEBS Lett. 1985, 191: 181-185. 10.1016/0014-5793(85)80004-1. DOI: 10.1016/0014-5793(85)80004-1
    • (1985) FEBS Lett , vol.191 , pp. 181-185
    • Bigay, J.1    Deterre, P.2    Pfister, C.3    Chabre, M.4
  • 12
    • 0025043264 scopus 로고
    • Conversion of 5-S-methyl-5-thio-D-ribose to methionine in Klebsiella pneumoniae. Stable isotope incorporation studies of the terminal enzymatic reactions in the pathway
    • PID: 2211600, COI: 1:CAS:528:DyaK3cXlvVOrtrg%3D
    • Myers RW, Abeles RH: Conversion of 5-S-methyl-5-thio-D-ribose to methionine in Klebsiella pneumoniae. Stable isotope incorporation studies of the terminal enzymatic reactions in the pathway. J Biol Chem. 1990, 265: 16913-16921.
    • (1990) J Biol Chem , vol.265 , pp. 16913-16921
    • Myers, R.W.1    Abeles, R.H.2
  • 13
    • 0028850881 scopus 로고
    • The methionine salvage pathway in Klebsiella pneumoniaeand rat liver. Identification and characterization of two novel dioxygenases
    • PID: 7852397, COI: 1:CAS:528:DyaK2MXjslahtbc%3D
    • Wray JW, Abeles RH: The methionine salvage pathway in Klebsiella pneumoniae and rat liver. Identification and characterization of two novel dioxygenases. J Biol Chem. 1995, 270: 3147-3153. 10.1074/jbc.270.7.3147. DOI: 10.1074/jbc.270.7.3147
    • (1995) J Biol Chem , vol.270 , pp. 3147-3153
    • Wray, J.W.1    Abeles, R.H.2
  • 14
    • 0001134202 scopus 로고
    • Requirements for transformation in Bacillus subtilis
    • PID: 16561900, COI: 1:CAS:528:DyaF3MXpsVSnsg%3D%3D
    • Anagnostopoulos C, Spizizen J: Requirements for transformation in Bacillus subtilis. J Bacteriol. 1961, 81: 741-746.
    • (1961) J Bacteriol , vol.81 , pp. 741-746
    • Anagnostopoulos, C.1    Spizizen, J.2
  • 15
    • 84872273512 scopus 로고    scopus 로고
    • Micado Release 6.1. [http://locus.jouy.inra.fr/cgi-bin/genmic/madbase/progs/madbase.operl]
    • Micado Release 6.1
  • 17
    • 0001615271 scopus 로고
    • Transformation of biochemically deficient strains of Bacillus subtilisby deoxyribonucleate
    • PID: 16590310, COI: 1:CAS:528:DyaG1MXktVGjtg%3D%3D
    • Spizizen J: Transformation of biochemically deficient strains of Bacillus subtilis by deoxyribonucleate. Proc Natl Acad Sci USA. 1958, 44: 1072-1078. DOI: 10.1073/pnas.44.10.1072
    • (1958) Proc Natl Acad Sci USA , vol.44 , pp. 1072-1078
    • Spizizen, J.1
  • 20
    • 0032850660 scopus 로고    scopus 로고
    • Sensitivity issues in DNA array-based expression measurements and performance of nylon microarrays for small samples
    • PID: 10441335, COI: 1:CAS:528:DyaK1MXmt1ans7g%3D
    • Bertucci F, Bernard K, Loriod B, Chang YC, Granjeaud S, Birnbaum D, Nguyen C, Peck K, Jordan BR: Sensitivity issues in DNA array-based expression measurements and performance of nylon microarrays for small samples. Hum Mol Genet. 1999, 8: 1715-1722. 10.1093/hmg/8.9.1715. DOI: 10.1093/hmg/8.9.1715
    • (1999) Hum Mol Genet , vol.8 , pp. 1715-1722
    • Bertucci, F.1    Bernard, K.2    Loriod, B.3    Chang, Y.C.4    Granjeaud, S.5    Birnbaum, D.6    Nguyen, C.7    Peck, K.8    Jordan, B.R.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.