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Volumn 6, Issue , 2005, Pages

A comparative study of discriminating human heart failure etiology using gene expression profiles

Author keywords

[No Author keywords available]

Indexed keywords

COMPARATIVE STUDIES; ENVIRONMENTAL FACTORS; GENE EXPRESSION DATA; GENE EXPRESSION PROFILES; MULTI-CLASS CLASSIFICATION; PARTIAL LEAST SQUARE (PLS); PENALIZED PARTIAL LEAST SQUARES; VENTRICULAR FUNCTIONS;

EID: 25444467981     PISSN: 14712105     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-6-205     Document Type: Article
Times cited : (48)

References (54)
  • 1
    • 0030002580 scopus 로고    scopus 로고
    • The progression from hypertension to congestive heart failure
    • Levy D, Larson MG, Vasan RS, Kannel WB, Ho KK: The progression from hypertension to congestive heart failure. JAMA 1996, 275: 1557-1562.
    • (1996) JAMA , vol.275 , pp. 1557-1562
    • Levy, D.1    Larson, M.G.2    Vasan, R.S.3    Kannel, W.B.4    Ho, K.K.5
  • 2
    • 0035350654 scopus 로고    scopus 로고
    • The risk of congestive heart failure: Sobering lessons from the Framingham Heart Study
    • Lloyd-Jones DM: The risk of congestive heart failure: sobering lessons from the Framingham Heart Study. Curr Cardiol Rep 2001, 3: 184-190.
    • (2001) Curr. Cardiol. Rep. , vol.3 , pp. 184-190
    • Lloyd-Jones, D.M.1
  • 3
    • 0034575441 scopus 로고    scopus 로고
    • From the sarcomere to the nucleus: Role of genetics and signaling in structural heart disease
    • Nicol RL, Frey N, Olson EN: From the sarcomere to the nucleus: role of genetics and signaling in structural heart disease. Annu Rev Genomics Hum Genet 2000, 1: 179-223.
    • (2000) Annu. Rev. Genomics Hum. Genet. , vol.1 , pp. 179-223
    • Nicol, R.L.1    Frey, N.2    Olson, E.N.3
  • 5
    • 0034893375 scopus 로고    scopus 로고
    • Prognostic impact of diabetes mellitus in patients with heart failure according to the etiology of left ventricular systolic dysfunction
    • Dries DL, Sweitzer NK, Drazner MH, Stevenson LW, Gersh BJ: Prognostic impact of diabetes mellitus in patients with heart failure according to the etiology of left ventricular systolic dysfunction. J Am Coll Cardiol 2001, 38: 421-428.
    • (2001) J. Am. Coll. Cardiol. , vol.38 , pp. 421-428
    • Dries, D.L.1    Sweitzer, N.K.2    Drazner, M.H.3    Stevenson, L.W.4    Gersh, B.J.5
  • 6
  • 11
    • 0035931947 scopus 로고    scopus 로고
    • Gene-expression profiles in hereditary breast cancer
    • Hedenfalk I, Duggan D, et al.: Gene-expression profiles in hereditary breast cancer. New England Journal of Medicine 2001, 344: 539-548.
    • (2001) New England Journal of Medicine , vol.344 , pp. 539-548
    • Hedenfalk, I.1    Duggan, D.2
  • 12
    • 0037076272 scopus 로고    scopus 로고
    • Diagnosis of multiple cancer types by shrunken centroids of gene expression
    • Tibshirani R, Hastie R, Narasimhan B, Chu G: Diagnosis of multiple cancer types by shrunken centroids of gene expression. PNAS 2002, 99: 6567-6572.
    • (2002) PNAS , vol.99 , pp. 6567-6572
    • Tibshirani, R.1    Hastie, R.2    Narasimhan, B.3    Chu, G.4
  • 17
    • 0242295767 scopus 로고    scopus 로고
    • Bayesian Factor Regression Models in the "Large p, Small n" Paradigm
    • West M: Bayesian Factor Regression Models in the "Large p, Small n" Paradigm. Bayesian Statistics 2003, 7: 723-732.
    • (2003) Bayesian Statistics , vol.7 , pp. 723-732
    • West, M.1
  • 18
    • 0036489046 scopus 로고    scopus 로고
    • Comparison of discrimination methods for the classification of tumors using gene expression data
    • Dudoit S, Fridlyand J, Speed T: Comparison of discrimination methods for the classification of tumors using gene expression data. J Am Stat Assoc 2002, 97:77-87.
    • (2002) J. Am. Stat. Assoc. , vol.97 , pp. 77-87
    • Dudoit, S.1    Fridlyand, J.2    Speed, T.3
  • 19
    • 0242559063 scopus 로고    scopus 로고
    • Linear regression and two-class classification with gene expression data
    • Huang X, Pan W: Linear regression and two-class classification with gene expression data. Bioinformatics 2003, 19: 2072-2078.
    • (2003) Bioinformatics , vol.19 , pp. 2072-2078
    • Huang, X.1    Pan, W.2
  • 21
    • 0001681052 scopus 로고
    • The collinearity problem in linear regression. The partial least squares (PLS) approach to generalized inverses
    • Wold S, Ruhe A, Wold H, Dunn WJ III: The collinearity problem in linear regression. The partial least squares (PLS) approach to generalized inverses. SIAM J of Scientific and Statistical Computing 1984, 5(3): 735-742.
    • (1984) SIAM J. of Scientific and Statistical Computing , vol.5 , Issue.3 , pp. 735-742
    • Wold, S.1    Ruhe, A.2    Wold, H.3    Dunn III, W.J.4
  • 22
  • 24
    • 0035478854 scopus 로고    scopus 로고
    • Random forests
    • Breiman L: Random forests. Machine Learning 2001, 45(1): 5-32.
    • (2001) Machine Learning , vol.45 , Issue.1 , pp. 5-32
    • Breiman, L.1
  • 29
    • 18944384502 scopus 로고    scopus 로고
    • When is a genomic classifier ready for prime time
    • Simon R: When is a genomic classifier ready for prime time. Nature Clinical Practice - Oncology 2004, 1: 4-5.
    • (2004) Nature Clinical Practice - Oncology , vol.1 , pp. 4-5
    • Simon, R.1
  • 30
    • 20444445170 scopus 로고    scopus 로고
    • Borrowing information from relevant microarray studies for sample classification using weighted partial least squares
    • Huang X, Pan W, Han X, Chen Y, Miller LW, Hall J: Borrowing information from relevant microarray studies for sample classification using weighted partial least squares. Computational Biology and Chemistry 2005, 29: 204-211.
    • (2005) Computational Biology and Chemistry , vol.29 , pp. 204-211
    • Huang, X.1    Pan, W.2    Han, X.3    Chen, Y.4    Miller, L.W.5    Hall, J.6
  • 31
    • 84952149204 scopus 로고
    • A statistical view of some chemometrics regression tools
    • (with discussion)
    • Frank IE, Friedman JH: A statistical view of some chemometrics regression tools (with discussion). Technometrics 1993, 35: 109-135.
    • (1993) Technometrics , vol.35 , pp. 109-135
    • Frank, I.E.1    Friedman, J.H.2
  • 32
    • 2342442343 scopus 로고    scopus 로고
    • Modeling the relationship between LVAD support time and gene expression changes in the human heart by penalized partial least squares
    • Huang X, Pan W, Park S, Han X, Miller LW, Hall J: Modeling the relationship between LVAD support time and gene expression changes in the human heart by penalized partial least squares. Bioinformatics 2004, 20: 888-894.
    • (2004) Bioinformatics , vol.20 , pp. 888-894
    • Huang, X.1    Pan, W.2    Park, S.3    Han, X.4    Miller, L.W.5    Hall, J.6
  • 33
    • 0041958932 scopus 로고
    • Ideal spatial adaptation by wavelet shrinkage
    • Donoho DL, Johnstone IM: Ideal spatial adaptation by wavelet shrinkage. Biometrika 1994, 81: 425-455.
    • (1994) Biometrika , vol.81 , pp. 425-455
    • Donoho, D.L.1    Johnstone, I.M.2
  • 35
    • 10244275023 scopus 로고    scopus 로고
    • Exploring blood spectra for signs of ovarian cancer
    • Hawkins DM, Wolfinger RD, Liu L, Young SS: Exploring blood spectra for signs of ovarian cancer. Chance 2003, 16: 19-23.
    • (2003) Chance , vol.16 , pp. 19-23
    • Hawkins, D.M.1    Wolfinger, R.D.2    Liu, L.3    Young, S.S.4
  • 36
    • 0036166439 scopus 로고    scopus 로고
    • Tumor classification by partial least squares using microarray gene expression data
    • Nguyen DV, Rocke DM: Tumor classification by partial least squares using microarray gene expression data. Bioinformatics 2002, 18: 39-50.
    • (2002) Bioinformatics , vol.18 , pp. 39-50
    • Nguyen, D.V.1    Rocke, D.M.2
  • 37
    • 0036364086 scopus 로고    scopus 로고
    • Singular value decomposition regression models for classification of tumors from microarray experiments
    • Ghosh D: Singular value decomposition regression models for classification of tumors from microarray experiments. Pacific Sympo. Biocomput 2002:18-29.
    • (2002) Pacific Sympo. Biocomput. , pp. 18-29
    • Ghosh, D.1
  • 38
    • 0346102889 scopus 로고    scopus 로고
    • Penalized discriminant methods for the classification of tumors from gene expression data
    • Ghosh D: Penalized discriminant methods for the classification of tumors from gene expression data. Biometrics 2003, 59: 992-1000.
    • (2003) Biometrics , vol.59 , pp. 992-1000
    • Ghosh, D.1
  • 39
    • 10444235517 scopus 로고    scopus 로고
    • Classification using generalized partial least squares
    • Technical Report 5, Bioconductor Project Working Papers
    • Ding B, Gentleman R: Classification using generalized partial least squares. Technical Report 5, Bioconductor Project Working Papers 2004, [http://www.bepress.com/bioconductor/paper5].
    • (2004)
    • Ding, B.1    Gentleman, R.2
  • 40
    • 16344365619 scopus 로고    scopus 로고
    • Classification using partial least squares with penalized logistic regression
    • Fort G, Lambert-Lacroix S: Classification using partial least squares with penalized logistic regression. Bioinformatics 2005, 21: 1104-1111.
    • (2005) Bioinformatics , vol.21 , pp. 1104-1111
    • Fort, G.1    Lambert-Lacroix, S.2
  • 44
    • 0035810997 scopus 로고    scopus 로고
    • Recursive partitioning for tumor classification with gene expression microarray data
    • Zhang H, Yu C-Y, Singer B, Xiong M: Recursive partitioning for tumor classification with gene expression microarray data. PNAS 2001, 98: 6730-6735.
    • (2001) PNAS , vol.98 , pp. 6730-6735
    • Zhang, H.1    Yu, C.-Y.2    Singer, B.3    Xiong, M.4
  • 45
    • 0003440665 scopus 로고    scopus 로고
    • Another approach to polychotomous classification
    • Technical report, Stanford University
    • Friedman J: Another approach to polychotomous classification. Technical report, Stanford University 1996.
    • (1996)
    • Friedman, J.1
  • 46
  • 47
    • 24044435942 scopus 로고    scopus 로고
    • Reducing multiclass to binary: A unifying approach for margin classifiers
    • Allwein E, Schapire R, Singer Y: Reducing multiclass to binary: A unifying approach for margin classifiers. Journal of Machine Learning Research 2000, 1: 113-141.
    • (2000) Journal of Machine Learning Research , vol.1 , pp. 113-141
    • Allwein, E.1    Schapire, R.2    Singer, Y.3
  • 49
    • 0038391397 scopus 로고    scopus 로고
    • Boosting for tumor classification with gene expression data
    • Dettling M, Bühlmann P: Boosting for tumor classification with gene expression data. Bioinformatics 2003, 19: 1063-1069.
    • (2003) Bioinformatics , vol.19 , pp. 1063-1069
    • Dettling, M.1    Bühlmann, P.2
  • 50
    • 3142537293 scopus 로고    scopus 로고
    • Multi-class tumor classification by discriminant partial least squares using microarray gene expression data and assessment of classification models
    • Tan Y, Shi L, Tong W, Hwang GTG, Wang C: Multi-class tumor classification by discriminant partial least squares using microarray gene expression data and assessment of classification models. Computational Biology and Chemistry 2004, 28: 235-243.
    • (2004) Computational Biology and Chemistry , vol.28 , pp. 235-243
    • Tan, Y.1    Shi, L.2    Tong, W.3    Hwang, G.T.G.4    Wang, C.5
  • 51
    • 0037076322 scopus 로고    scopus 로고
    • Selection bias in gene extraction on the basis of microarray gene-expression data
    • Ambroise C, McLachlan GJ: Selection bias in gene extraction on the basis of microarray gene-expression data. PNAS 2002, 99:6562-6566.
    • (2002) PNAS , vol.99 , pp. 6562-6566
    • Ambroise, C.1    McLachlan, G.J.2
  • 52
    • 0037245343 scopus 로고    scopus 로고
    • Pitfalls in the use of DNA microarray data for diagnostic and prognostic classification
    • Simon R, Radmacher MD, Dobbin K, McShane LM: Pitfalls in the use of DNA microarray data for diagnostic and prognostic classification. J Natl Cancer Inst 2003, 95: 14-18.
    • (2003) J. Natl. Cancer Inst. , vol.95 , pp. 14-18
    • Simon, R.1    Radmacher, M.D.2    Dobbin, K.3    McShane, L.M.4
  • 54
    • 18744413287 scopus 로고    scopus 로고
    • Estimating misclassification error with small samples via bootstrap cross-validation
    • Fu WJ, Carroll RJ, Wang S: Estimating misclassification error with small samples via bootstrap cross-validation. Bioinformatics 2005, 21: 1979-1986.
    • (2005) Bioinformatics , vol.21 , pp. 1979-1986
    • Fu, W.J.1    Carroll, R.J.2    Wang, S.3


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