Endonuclease-based logic gates and sensors using magnetic force-amplified readout of DNA scission on cantilevers

Journal of the American Chemical Society

Volumn 127, Issue 36, 2005, Pages 12666-12672

  Weizmann, Yossi ^a   Elnathan, Roey ^a   Lioubashevski, Oleg ^a   Willner, Itamar ^a  

^a HEBREW UNIVERSITY OF JERUSALEM   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

CATALYSTS; CHEMICAL SENSORS; LOGIC GATES; MAGNETIC MATERIALS;

ECORI; ENDONUCLEASE ACTIVITIES; ENDONUCLEASE-BASED LOGIC GATES AND SENSORS; MAGNETIC PARTICLES;

DNA;

DNA; ENDONUCLEASE;

ARTICLE; CATALYSIS; CHEMICAL MODIFICATION; DNA SEQUENCE; ENZYME ACTIVITY; MAGNETIC FIELD; MOLECULAR MECHANICS; SENSOR;

BIOSENSING TECHNIQUES; COMPUTERS, MOLECULAR; DNA; ENDONUCLEASES; MAGNETICS; NANOTECHNOLOGY; SENSITIVITY AND SPECIFICITY;

EID: 24744470275     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja0533287     Document Type: Article

References (53)

1. (a) Ballardini, R.; Balzani, V.; Credi, A.; Gandolfi, M. T.; Venturi, M. Acc. Chem. Res. 2001, 34, 445-455.
2. (b) Raymo, F. M. Adv. Mater. 2002, 14, 401-414.
3. (c) Willner, I.; Willner, B. J. Mater. Chem. 1998, 8, 2543-2556.
4. (a) Willner, I. Acc. Chem. Res. 1997, 30, 347-356.
5. (b) Willner, I.; Willner, B. Pure Appl. Chem. 2001, 73, 535-542.
6. (c) Willner, I.; Rubin, S. Angew. Chem., Int. Ed. Engl. 1996, 35, 367-385.
7. (a) Bachtold, A.; Hadley, P.; Nakanishi, T.; Dekker, C. Science 2001, 294, 1317-1320.
8. (b) Huang, Y.; Duan, X.; Cui, Y.; Lanhon, L. J.; Kim, K. H.; Lieber, C. M. Science 2001, 294, 1313-1317.
9. (c) Hunag, Y.; Duan, X. F.; Wei, Q. Q.; Lieber, C. M. Science 2001, 291, 630-633.
10. (a) Remacle, F.; Speiser, S.; Levine, R. D. J. Phys. Chem. B 2001, 105, 5589-5591.
11. (b) Remacle, F.; Weinkauf, R.; Steinitz, D.; Kompa, K. L.; Levine, R. D. Chem. Phys. 2002, 281, 363-372.
12. (a) de Silva, A. P.; MeClenghan, N. D. Chem.-Eur. J. 2004, 10, 574-586.
13. (b) Straight, S. D.; Andreasson, J.; Kodis, G.; Moore, A. L.; Moore, T. A.; Gust, D. J. Am. Chem. Soc. 2005, 127, 2717-2724.
14. (c) Tour, J. M. Acc. Chem. Res. 2000, 33, 791-804.
15. (d) Guo, X.; Zhang, D.; Zhu, D. Adv. Mater. 2004, 16, 125-130.
16. (a) Collier, C. P.; Wong, E. W.; Belohradsky, M.; Raymo, F. M.; Stoddart, J. F.; Kuekes, P. J.; Williams, R. S.; Heath, J. R. Science 1999, 285, 391-394.
17. (b) Balzani, V.; Credi, A.; Venturi, M. ChemPhysChem 2003, 3, 49-59.
18. (a) Stojanovic, M. N.; Mitchell, T. E.; Stefanovic, D. J. Am. Chem. Soc. 2002, 124, 3555-3561.
19. (b) Adelman, I. M. Science 1994, 260, 1021-1024.
20. (c) Sakamoto, K.; Gonzu, H.; Komiya, K.; Kiga, D.; Yokoyama, S.; Yokomori, T.; Hagiya, M. Science 2000, 288, 1223-1226.
21. (a) Gilat, S. L.; Kawai, S. H.; Lehn, J. M. Chem.-Eur. J. 1995, 1, 275-284.
22. (b) Collin, J. P.; Gavina, P.; Sauvage, J.-P Chem. Commun. 1996, 2005-2006.
23. (c) Shipway, A. N.; Katz, E.; Willner, I. Struct. Bonding 2001, 99, 237-281.
24. (a) Liddel, P. A.; Kodis, G.; Andreasson, J.; de La Ganza, L.; Bandyopadhyay, S.; Mitchell, R. H.; Moore, T. A.; Moore, A. L.; Gust, D. J. Am. Chem. Soc. 2004, 126, 4803-4811.
25. (b) Andreasson, J.; Kodis, G.; Terazoni, Y.; Liddell, P. A.; Bandyopadhyay, S.; Mitchell, R. H.; Moore, T. A.; Moore, A. L.; Gust, D. J. Am. Chem. Soc. 2004, 126, 15926-15927.
26. (c) Willner, I.; Marx, S.; Eichen, Y. Angew. Chem., Int. Ed. Engl. 1992, 31, 1243-1244.
27. (d) Ferringa, B. L.; van Delden, R. A.; Koumbera, N.; Geertsema, E. M. Chem. Rev. 2000, 100, 1789-1816.
28. Credi, A.; Balzani, V.; Langford, S. J.; Stoddart, J. F. J. Am. Chem. Soc. 1997, 113, 1992-1996.
29. (a) Liu, Z. F.; Hashimoto, K.; Fujishima, A. Nature 1990, 347, 658-660.
30. (b) Doron, A.; Portnoy, M.; Lion-Dagan, M.; Katz, E.; Willner, I. J. Am. Chem. Soc. 1996, 118, 8937-8944.
31. (a) Willner, I.; Pardo-Yissar, V.; Katz, E.; Ranjit, K. T. J. Electroanal. Chem. 2001, 497, 172-177.
32. (b) Willner, I.; Willner, B. Adv. Mater. 1997, 9, 351-355.
33. Katz, E.; Lioubashevski, O.; Willner, I. J. Am. Chem. Soc. 2004, 126, 15520-15532.
34. (a) Ashkenazy, G.; Ghadiri, M. R. J. Am. Chem. Soc. 2004, 126, 11140-11141.
35. (b) Dueber, J. E.; Yeh, B. J.; Chak, K.; Lim, W. A. Science 2003, 301, 1904-1908.
36. (c) Sivan, S.; Tuchman, S.; Lotan, N. BioSystems 2003, 70, 21-33.
37. (a) Benenson, Y.; Paz-Elizur, T.; Adar, R.; Keinan, E.; Livneh, Z.; Shapiro, E. Nature 2001, 414, 430-434.
38. (b) Faulhammer, D.; Curkas, A. R.; Lipton, R. J.; Landweber, L. F. Proc. Natl. Acad. Sci. U.S.A. 2000, 97, 1385-1389.
39. (a) Liu, Q.; Wang, L.; Frutos, A. G.; Condon, A. E.; Corn, R. M.; Smith, L. M. Nature 2000, 403, 174-179.
40. (b) Ouyang, Q.; Kaplan, P. D.; Liu, S.; Libchaber, A. Science 1997, 278, 446-449.
41. (c) Cox, J. C.; Ellington, A. D. Curr. Biol. 2001, 11, R336-R336.
42. (d) Stojanovic, M. N.; Stefanovic, D. Nat. Biotechnol. 2003, 21, 1069-1074.
43. (e) Stojanovic, M. N.; Stefanovic, D. J. Am. Chem. Soc. 2003, 125, 6673-6676.
44. (a) Raymo, F. M.; Giordani, S. J. Am. Chem. Soc. 2001, 123, 4651-4652.
45. (b) Ji, H. F.; Debestani, R.; Brown, G. M. J. Am. Chem. Soc. 2000, 122, 9306-9307.
46. Guo, X.; Zhang, D.; Zhang, G.; Zhu, D. J. Phys. Chem. B 2004, 108, 11942-11945.
47. (a) Saghatelian, A.; Volcker, N. H.; Guckian, K. M.; Lin, V. S.-Y.; Ghadiri, R. J. Am. Chem. Soc. 2003, 125, 346-347.
48. (b) Okamoto, A.; Tanaka, K.; Saito, I. J. Am. Chem. Soc. 2004, 126, 9458-9463.
49. (a) De Silva, A. P.; McCleneghan, N. D. J. Am. Chem. Soc. 2000, 122, 3965-3966.
50. (b) Margulies, D.; Melman, G.; Felder, C. F.; Arad-Yellin, R.; Shanzer, A. J. Am. Chem. Soc. 2004, 126, 15400-15401.
51. Remade, F.; Willner, I.; Levine, R. D. ChemPhysChem 2005, 6, 1239-1242.
52. Weizmann, Y.; Patolsky, F.; Lioubashevski, O.; Willner, I. J. Am. Chem. Soc. 2004, 126, 1073-1080.
53. Weizmann, Y.; Elnathan, R.; Lioubashevski, O.; Willner, I. Nano Lett. 2005, 5, 741-744.