-
1
-
-
0037388094
-
Genome-wide analysis of mRNA translation profiles in Sacharomyces cerevisiae
-
Arava Y, Wang Y, Storey JD, Liu CL, Brown PO, Herschlag D. 2003. Genome-wide analysis of mRNA translation profiles in Sacharomyces cerevisiae. Proceedings of the National Academy of Sciences of the USA 100: 3889-3894.
-
(2003)
Proceedings of the National Academy of Sciences of the USA
, vol.100
, pp. 3889-3894
-
-
Arava, Y.1
Wang, Y.2
Storey, J.D.3
Liu, C.L.4
Brown, P.O.5
Herschlag, D.6
-
2
-
-
0032918120
-
Selective translation of cytoplasmic mRNAs in plants
-
Bailey-Serres J. 1999. Selective translation of cytoplasmic mRNAs in plants. Trends in Plant Science 4: 142-148.
-
(1999)
Trends in Plant Science
, vol.4
, pp. 142-148
-
-
Bailey-Serres, J.1
-
3
-
-
0030265734
-
Both 5′ and 3′ sequences of maize adh1 mRNA are required to enhance translation under low oxygen
-
Bailey-Serres J, Dawe RK 1996. Both 5′ and 3′ sequences of maize adh1 mRNA are required to enhance translation under low oxygen. Plant Physiology 112: 685-695.
-
(1996)
Plant Physiology
, vol.112
, pp. 685-695
-
-
Bailey-Serres, J.1
Dawe, R.K.2
-
4
-
-
11944250236
-
Hypoxic stress-induced changes in ribosomes of maize seedling roots
-
Bailey-Serres J, Freeling M. 1990. Hypoxic stress-induced changes in ribosomes of maize seedling roots. Plant Physiology 94: 1237-1243.
-
(1990)
Plant Physiology
, vol.94
, pp. 1237-1243
-
-
Bailey-Serres, J.1
Freeling, M.2
-
5
-
-
0037244732
-
Gene and enhancer trap transposable elements reveal oxygen deprivation-regulated genes and their complex patterns of expression in arabidopsis
-
Baxter-Burrell A, Chang R, Springer P, Bailey-Serres J. 2003. Gene and enhancer trap transposable elements reveal oxygen deprivation-regulated genes and their complex patterns of expression in arabidopsis. Annals of Botany 91: 129-141.
-
(2003)
Annals of Botany
, vol.91
, pp. 129-141
-
-
Baxter-Burrell, A.1
Chang, R.2
Springer, P.3
Bailey-Serres, J.4
-
6
-
-
0037076971
-
RopGAP4-dependent Rop GTPase rheostat control of Arabidopsis oxygen deprivation tolerance
-
Baxter-Burrell A, Yang Z, Springer PS, Bailey-Serres J. 2002. RopGAP4-dependent Rop GTPase rheostat control of Arabidopsis oxygen deprivation tolerance. Science 296: 2026-2028.
-
(2002)
Science
, vol.296
, pp. 2026-2028
-
-
Baxter-Burrell, A.1
Yang, Z.2
Springer, P.S.3
Bailey-Serres, J.4
-
7
-
-
1142306035
-
Structure and expression profile of the sucrose synthase multigene family in Arabidopsis
-
Baud S, Vaultier MN, Rochat C. 2004. Structure and expression profile of the sucrose synthase multigene family in Arabidopsis. Journal of Experimental Botany 55: 397-409.
-
(2004)
Journal of Experimental Botany
, vol.55
, pp. 397-409
-
-
Baud, S.1
Vaultier, M.N.2
Rochat, C.3
-
8
-
-
4344648874
-
Activating transcription factor 4 is translationally regulated by hypoxic stress
-
Blais JD, Filipenko V, Bi M, Harding HP, Ron D, Koumenis C, et al. 2004. Activating transcription factor 4 is translationally regulated by hypoxic stress. Molecular and Cellular Biology 24: 7469-7482.
-
(2004)
Molecular and Cellular Biology
, vol.24
, pp. 7469-7482
-
-
Blais, J.D.1
Filipenko, V.2
Bi, M.3
Harding, H.P.4
Ron, D.5
Koumenis, C.6
-
9
-
-
0036438894
-
Regulation of peptide-chain elongation in mammalian cells
-
Browne GJ, Proud CG. 2002. Regulation of peptide-chain elongation in mammalian cells. European Journal of Biochemistry 269: 5360-5368.
-
(2002)
European Journal of Biochemistry
, vol.269
, pp. 5360-5368
-
-
Browne, G.J.1
Proud, C.G.2
-
10
-
-
11944265276
-
Hypoxic stress inhibits multiple aspects of the potato tuber wound response
-
Butler W, Cook L, Vayda ME. 1990. Hypoxic stress inhibits multiple aspects of the potato tuber wound response. Plant Physiology 93: 264-27.
-
(1990)
Plant Physiology
, vol.93
, pp. 264-327
-
-
Butler, W.1
Cook, L.2
Vayda, M.E.3
-
11
-
-
0034144393
-
Patterns of protein synthesis and tolerance of anoxia in root tips of maize seedlings acclimated to a low-oxygen environment, and identification of proteins by mass spectrometry
-
Chang WWP, Huang L, Shen M, Webster C, Burlingame AL, Roberts JKM. 2000. Patterns of protein synthesis and tolerance of anoxia in root tips of maize seedlings acclimated to a low-oxygen environment, and identification of proteins by mass spectrometry. Plant Physiology 122: 95-317.
-
(2000)
Plant Physiology
, vol.122
, pp. 95-317
-
-
Chang, W.W.P.1
Huang, L.2
Shen, M.3
Webster, C.4
Burlingame, A.L.5
Roberts, J.K.M.6
-
12
-
-
0036080361
-
Adaptive quality-based clustering of gene expression profiles
-
De Smet F, Mathys J, Marchai K, Thijs G, De Moor B, Moreau Y. 2002. Adaptive quality-based clustering of gene expression profiles. Bioinformatics 18: 735-746.
-
(2002)
Bioinformatics
, vol.18
, pp. 735-746
-
-
De Smet, F.1
Mathys, J.2
Marchai, K.3
Thijs, G.4
De Moor, B.5
Moreau, Y.6
-
13
-
-
0037244945
-
Enhancing the anaerobic response
-
Dolferus R, Klok EJ, Delessert C, Wilson S, Ismond K, Good AG, et al. 2003. Enhancing the anaerobic response. Annals of Botany 91: 111-117.
-
(2003)
Annals of Botany
, vol.91
, pp. 111-117
-
-
Dolferus, R.1
Klok, E.J.2
Delessert, C.3
Wilson, S.4
Ismond, K.5
Good, A.G.6
-
14
-
-
0037239014
-
Plant haemoglobins, nitric oxide and hypoxic stress
-
Dordas C, Rivoal J, Hill RD. 2003. Plant haemoglobins, nitric oxide and hypoxic stress. Annals of Botany 91: 173-178.
-
(2003)
Annals of Botany
, vol.91
, pp. 173-178
-
-
Dordas, C.1
Rivoal, J.2
Hill, R.D.3
-
15
-
-
0347981309
-
Oxygen deficiency and root metabolism: Injury and acclimation under hypoxia and anoxia
-
Drew MC. 1997. Oxygen deficiency and root metabolism: injury and acclimation under hypoxia and anoxia. Annual Review of Plant Physiology and Plant Molecular Biology 48: 223-250.
-
(1997)
Annual Review of Plant Physiology and Plant Molecular Biology
, vol.48
, pp. 223-250
-
-
Drew, M.C.1
-
16
-
-
0029136453
-
Post-transcriptional regulation of gene expression in oxygen-deprived roots of maize
-
Fennoy SL, Bailey-Serres J. 1995. Post-transcriptional regulation of gene expression in oxygen-deprived roots of maize. The Plant Journal 7: 287-295.
-
(1995)
The Plant Journal
, vol.7
, pp. 287-295
-
-
Fennoy, S.L.1
Bailey-Serres, J.2
-
18
-
-
0031658611
-
Transcriptional and post-transcriptional processes regulate gene expression in oxygen-deprived roots of maize
-
Fennoy SL, Nong T, Bailey-Serres J. 1998. Transcriptional and post-transcriptional processes regulate gene expression in oxygen-deprived roots of maize. The Plant Journal 15: 727-735.
-
(1998)
The Plant Journal
, vol.15
, pp. 727-735
-
-
Fennoy, S.L.1
Nong, T.2
Bailey-Serres, J.3
-
19
-
-
4444368410
-
Plant responses to hypoxia - Is survival a balancing act?
-
Fukao T, Bailey-Serres J. 2004. Plant responses to hypoxia - is survival a balancing act? Trends in Plant Science 9: 449-456.
-
(2004)
Trends in Plant Science
, vol.9
, pp. 449-456
-
-
Fukao, T.1
Bailey-Serres, J.2
-
21
-
-
0037795742
-
Response of plant metabolism to too little oxygen
-
Geigenberger P. 2003. Response of plant metabolism to too little oxygen. Current Opinion in Plant Biology 6: 247-256.
-
(2003)
Current Opinion in Plant Biology
, vol.6
, pp. 247-256
-
-
Geigenberger, P.1
-
22
-
-
0037168544
-
Increased level of hemoglobin 1 enhances survival of hypoxic stress and promotes early growth in Arabidopsis thaliana
-
Hunt PW, Klok EJ, Trevaskis B, Watts RA, Ellis MH, Peacock WJ, et al. 2002. Increased level of hemoglobin 1 enhances survival of hypoxic stress and promotes early growth in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the USA. 99: 17197-17202.
-
(2002)
Proceedings of the National Academy of Sciences of the USA
, vol.99
, pp. 17197-17202
-
-
Hunt, P.W.1
Klok, E.J.2
Trevaskis, B.3
Watts, R.A.4
Ellis, M.H.5
Peacock, W.J.6
-
25
-
-
13944270653
-
mRNA sequence features responsible for translational regulation in Arabidopsis
-
Kawaguchi R, Bailey-Serres, J. 2005. mRNA sequence features responsible for translational regulation in Arabidopsis. Nucleic Acids Research 33: 955-965.
-
(2005)
Nucleic Acids Research
, vol.33
, pp. 955-965
-
-
Kawaguchi, R.1
Bailey-Serres, J.2
-
26
-
-
2542642407
-
Differential mRNA translation contributes to gene regulation under non-stress and dehydration stress conditions in Arabidopsis thaliana
-
Kawaguchi R, Girke T, Bray EA, Bailey-Serres J. 2004. Differential mRNA translation contributes to gene regulation under non-stress and dehydration stress conditions in Arabidopsis thaliana. The Plant Journal 38: 823-839.
-
(2004)
The Plant Journal
, vol.38
, pp. 823-839
-
-
Kawaguchi, R.1
Girke, T.2
Bray, E.A.3
Bailey-Serres, J.4
-
27
-
-
0036801541
-
Expression profile analysis of the low-oxygen response in Arabidopsis root cultures
-
Klok EJ, Wilson IW, Wilson D, Chapman SC, Ewing RM, Somerville SC, et al. 2002. Expression profile analysis of the low-oxygen response in Arabidopsis root cultures. The Plant Cell 14: 2481-2494.
-
(2002)
The Plant Cell
, vol.14
, pp. 2481-2494
-
-
Klok, E.J.1
Wilson, I.W.2
Wilson, D.3
Chapman, S.C.4
Ewing, R.M.5
Somerville, S.C.6
-
28
-
-
0033969179
-
Multiple paths of sugar-sensing and a sugar/oxygen overlap of genes of sucrose and ethanol metabolism
-
Koch KE, Ying Z, Wu Y, Avigne WT. 2000. Multiple paths of sugar-sensing and a sugar/oxygen overlap of genes of sucrose and ethanol metabolism. Journal of Experimental Botany 51: 417-427.
-
(2000)
Journal of Experimental Botany
, vol.51
, pp. 417-427
-
-
Koch, K.E.1
Ying, Z.2
Wu, Y.3
Avigne, W.T.4
-
29
-
-
0029893038
-
Intron-specific stimulation of anaerobic gene expression and splicing efficiency in maize cells
-
Köhler U, Donath M, Mendel RR, Cerff R, Hehl R. 1996. Intron-specific stimulation of anaerobic gene expression and splicing efficiency in maize cells. Molecular and General Genetics 251: 252-258.
-
(1996)
Molecular and General Genetics
, vol.251
, pp. 252-258
-
-
Köhler, U.1
Donath, M.2
Mendel, R.R.3
Cerff, R.4
Hehl, R.5
-
30
-
-
0038119929
-
The pyruvate decarboxylasel gene of Arabidopsis is required during anoxia but not other environmental stresses
-
Kursteiner O, Dupuis I, Kuhlemeier C. 2003. The pyruvate decarboxylasel gene of Arabidopsis is required during anoxia but not other environmental stresses. Plant Physiology 132: 968-978.
-
(2003)
Plant Physiology
, vol.132
, pp. 968-978
-
-
Kursteiner, O.1
Dupuis, I.2
Kuhlemeier, C.3
-
31
-
-
0014202544
-
Dissociation and reassembly of polyribosomes in relation to protein synthesis in the soybean root
-
Lin CY, Key JL. 1967. Dissociation and reassembly of polyribosomes in relation to protein synthesis in the soybean root. Journal of Molecular Biology 26: 237-247.
-
(1967)
Journal of Molecular Biology
, vol.26
, pp. 237-247
-
-
Lin, C.Y.1
Key, J.L.2
-
32
-
-
20444462441
-
Global transcription profiling reveals comprehensive insights into hypoxic response in Arabidopsis
-
Liu F, Vantoai T, Moy LP, Bock G, Linford LD, Quackenbush J. 2005. Global transcription profiling reveals comprehensive insights into hypoxic response in Arabidopsis. Plant Physiology 137: 1115-1129.
-
(2005)
Plant Physiology
, vol.137
, pp. 1115-1129
-
-
Liu, F.1
Vantoai, T.2
Moy, L.P.3
Bock, G.4
Linford, L.D.5
Quackenbush, J.6
-
33
-
-
20444493630
-
A genome-wide analysis of the effects of sucrose on gene expression in Arabidopsis seedlings under anoxia
-
Loreti E, Poggi A, Novi G, Alpi A, Perata P. 2005. A genome-wide analysis of the effects of sucrose on gene expression in Arabidopsis seedlings under anoxia. Plant Physiology 137: 1130-1138.
-
(2005)
Plant Physiology
, vol.137
, pp. 1130-1138
-
-
Loreti, E.1
Poggi, A.2
Novi, G.3
Alpi, A.4
Perata, P.5
-
34
-
-
2642566765
-
Gene expression analyzed by high-resolution state array analysis and quantitative proteomics
-
3.5
-
MacKay VL, Li X, Flory MR, Turcott E, Law GL, Serikawa KA, et al. 2004. Gene expression analyzed by high-resolution state array analysis and quantitative proteomics. Molecular and Cellular Proteomics 3.5: 478-489.
-
(2004)
Molecular and Cellular Proteomics
, pp. 478-489
-
-
MacKay, V.L.1
Li, X.2
Flory, M.R.3
Turcott, E.4
Law, G.L.5
Serikawa, K.A.6
-
35
-
-
4544230849
-
Changes in the mitochondrial proteome during the anoxia to air transition in rice focus around cytochrome-containing respiratory complexes
-
Millar AH, Trend AE, Heazlewood JL. 2004. Changes in the mitochondrial proteome during the anoxia to air transition in rice focus around cytochrome-containing respiratory complexes. Journal of Biological Chemistry 279: 39471-39478.
-
(2004)
Journal of Biological Chemistry
, vol.279
, pp. 39471-39478
-
-
Millar, A.H.1
Trend, A.E.2
Heazlewood, J.L.3
-
36
-
-
0842307345
-
Hypobaric biology: Arabidopsis gene expression to low atmospheric pressure
-
Paul AL, Schuerger AC, Michael PP, Richards JT, Manak MS, Ferl RJ. 2004. Hypobaric biology: Arabidopsis gene expression to low atmospheric pressure. Plant Physiology 134: 215-223.
-
(2004)
Plant Physiology
, vol.134
, pp. 215-223
-
-
Paul, A.L.1
Schuerger, A.C.2
Michael, P.P.3
Richards, J.T.4
Manak, M.S.5
Ferl, R.J.6
-
37
-
-
0344758983
-
Starting the protein synthesis machine: Eukaryotic translation initiation
-
Preiss T, Hentze MW. 2003. Starting the protein synthesis machine: eukaryotic translation initiation. BioEssays 25: 1201-1211.
-
(2003)
BioEssays
, vol.25
, pp. 1201-1211
-
-
Preiss, T.1
Hentze, M.W.2
-
38
-
-
0345602742
-
Homo-directional changes in transcriptome composition and mRNA translation induced by rapamycin and heat shock
-
Preiss T, Baron-Benhamou J, Ansorge W, Hentze MW. 2003. Homo-directional changes in transcriptome composition and mRNA translation induced by rapamycin and heat shock. Nature Structural Biology 10: 1039-1047.
-
(2003)
Nature Structural Biology
, vol.10
, pp. 1039-1047
-
-
Preiss, T.1
Baron-Benhamou, J.2
Ansorge, W.3
Hentze, M.W.4
-
39
-
-
2342501846
-
Development and evaluation of an Arabidopsis whole genome Affymetrix probe array
-
Redman JC, Haas BJ, Tanimoto G, Town CD. 2004. Development and evaluation of an Arabidopsis whole genome Affymetrix probe array. The Plant Journal 38: 545-561.
-
(2004)
The Plant Journal
, vol.38
, pp. 545-561
-
-
Redman, J.C.1
Haas, B.J.2
Tanimoto, G.3
Town, C.D.4
-
40
-
-
1642564552
-
The zinc finger protein Zatl2 is required for cytosolic ascorbate peroxidase 1 expression during oxidative stress in Arabidopsis
-
Rizhsky L, Davletova S, Liang H, Mittler R. 2004. The zinc finger protein Zatl2 is required for cytosolic ascorbate peroxidase 1 expression during oxidative stress in Arabidopsis. Journal of Biological Chemistry 279: 11736-11743.
-
(2004)
Journal of Biological Chemistry
, vol.279
, pp. 11736-11743
-
-
Rizhsky, L.1
Davletova, S.2
Liang, H.3
Mittler, R.4
-
41
-
-
0018869288
-
The anaerobic proteins of maize
-
Sachs MM, Freeling M, Okimoto R. 1980. The anaerobic proteins of maize. Cell 20: 761-767.
-
(1980)
Cell
, vol.20
, pp. 761-767
-
-
Sachs, M.M.1
Freeling, M.2
Okimoto, R.3
-
43
-
-
19044378214
-
Monitoring the expression pattern of around 7,000 Arabidopsis genes under ABA treatments using a full-length cDNA microarray
-
Seki M, Ishida J, Narusaka M, Fujita M, Nanjo T, Umezawa T, et al. 2002. Monitoring the expression pattern of around 7,000 Arabidopsis genes under ABA treatments using a full-length cDNA microarray. Functional and Integrative Genomics 2: 282-291.
-
(2002)
Functional and Integrative Genomics
, vol.2
, pp. 282-291
-
-
Seki, M.1
Ishida, J.2
Narusaka, M.3
Fujita, M.4
Nanjo, T.5
Umezawa, T.6
-
44
-
-
0141979318
-
The transcriptome and its translation during recovery from cell cycle arrest in Saccharomyces cerevisiae
-
2.3
-
Serikawa KA, Xu XL, MacKay VL, Law GL, Zong Q, Zhao LP, et al. 2003. The transcriptome and its translation during recovery from cell cycle arrest in Saccharomyces cerevisiae. Molecular and Cellular Pmteomics 2.3: 191-204.
-
(2003)
Molecular and Cellular Pmteomics
, pp. 191-204
-
-
Serikawa, K.A.1
Xu, X.L.2
MacKay, V.L.3
Law, G.L.4
Zong, Q.5
Zhao, L.P.6
-
45
-
-
3543035280
-
Evaluation of translational control mechanisms in response to oxygen deprivation in maize
-
Szick-Miranda K, Jayachandran S, Tam A, Werner-Fraczek J, Williams AJ, Bailey-Serres, J. 2003. Evaluation of translational control mechanisms in response to oxygen deprivation in maize. Russian Journal of Plant Physiology 50: 774-786.
-
(2003)
Russian Journal of Plant Physiology
, vol.50
, pp. 774-786
-
-
Szick-Miranda, K.1
Jayachandran, S.2
Tam, A.3
Werner-Fraczek, J.4
Williams, A.J.5
Bailey-Serres, J.6
-
46
-
-
0024477261
-
On finding all suboptimal foldings of an RNA molecule
-
Zuker M. 1989. On finding all suboptimal foldings of an RNA molecule. Science 244: 48-52.
-
(1989)
Science
, vol.244
, pp. 48-52
-
-
Zuker, M.1
|