Reversing histone methylation

Nature

Volumn 436, Issue 7054, 2005, Pages 1103-1106

  Bannister, Andrew J ^a   Kouzarides, Tony ^a  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL MODIFICATION; ENZYMES; HISTOLOGY;

HISTONES PACKAGE DNA; LYSINES; METHYLATION;

DNA;

ARGININE; DNA; HISTONE; LYSINE;

DNA;

ARTICLE; CHROMATIN; DNA PACKAGING; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN METHYLATION; PROTEIN MODIFICATION; PROTEIN PROCESSING; PROTEIN PROTEIN INTERACTION; REACTION ANALYSIS;

ANIMALS; ARGININE; CHROMATIN; HISTONES; HUMANS; LYSINE; METHYLATION;

EID: 24144475284     PISSN: 00280836     EISSN: None     Source Type: Journal    
DOI: 10.1038/nature04048     Document Type: Article

References (36)

1. Fischle, W., Wang, Y. & Allis, C. D. Histone and chromatin cross-talk. Curr. Opin. Cell Biol. 15, 172-183 (2003).
2. Peterson, C. L. & Laniel, M. A. Histones and histone modifications. Curr. Biol. 14, R546-R551 (2004).
3. Margueron, R., Trojer, P. & Reinberg, D. The key to development: interpreting the histone code? Curr. Opin. Genet. Dev. 15,163-176 (2005).
4. Rea, S. et al. Regulation of chromatin structure by site-specific histone H3 methyltransferases. Nature 406, 593-599 (2000).
5. Shi, Y. et al. Histone demethylation mediated by the nuclear amine oxidase homolog LSD1. Cell 119, 941-953 (2004).
6. Cuthbert, G. L. et al. Histone deimination antagonizes arginine methylation. Cell 118, 545-553 (2004).
7. Wang, Y. et al. Human PAD4 regulates histone arginine methylation levels via demethylimination. Science 306, 279-283 (2004).
8. Bannister, A. J., Schneider, R. & Kouzarides, T. Histone methylation: dynamic or static? Cell 109, 801-806 (2002).
9. Martens, J. et al. The profile of repeat-associated histone lysine methylation states in the mouse epigenome. EMBO J. 24, 800-812 (2005).
10. Peters, A. H. et al. Partitioning and plasticity of repressive histone methylation states in mammalian chromatin. Mol. Cell 12, 1577-1589 (2003).
11. Schotta, G. et al. A silencing pathway to induce H3-K9 and H4-K20 trimethylation at constitutive heterochromatin. Genes Dev. 18, 1251-1262 (2004).
12. Plath, K. et al. Role of histone H3 lysine 27 methylation in X inactivation. Science 300, 131-135 (2003).
13. Kohlmaier, A. et al. A chromosomal memory triggered by Xist regulates histone methylation in X inactivation. PLoS Biol. 2, E171 (2004).
14. Rougeulle, C. et al. Differential histone H3 Lys-9 and Lys-27 methylation profiles on the X chromosome. Mol. Cell. Biol. 24, 5475-5478 (2004).
15. Rice, J. C. et al. Histone methyltransferases direct different degrees of methylation to define distinct chromatin domains. Mol. Cell 12, 1591-1598 (2003).
16. Bernstein, B. E. et al. Genomic maps and comparative analysis of histone modifications in human and mouse. Cell 120, 169-181 (2005).
17. Pray-Grant, M. G., Daniel, J. A., Schieltz, D., Yates, J. R. III & Grant, P. A. Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation. Nature 433, 434-438 (2005).
18. Huyen, Y. et al. Methylated lysine 79 of histone H3 targets 53BP1 to DNA double-strand breaks. Nature 432, 406-411 (2004).
19. Maurer-Stroh, S. et al. The Tudor domain 'Royal Family': Tudor, plant Agenet, Chromo, PWWP and MBT domains. Trends Biochem. Sci. 28, 69-74 (2003).
20. Wysocka, J. et al. WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development. Cell 121, 859-872 (2005).
21. Sanders, S. L. et al. Methylation of histone H4 lysine 20 controls recruitment of Crb2 to sites of DNA damage. Cell 119, 603-614 (2004).
22. Freitag, M. & Selker, E. U. Controlling DNA methylation: many roads to one modification. Curr. Opin. Genet. Dev. 15, 191-199 (2005).
23. Fraga, M. F. et al. Loss of acetylation at Lys16 and trimethylation at Lys20 of histone H4 is a common hallmark of human cancer. Nat. Genet. 37, 391-400 (2005).
24. Pal-Bhadra, M. et al. Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery. Science 303, 669-672 (2004).
25. White, S. A. & Allshire, R. C. Loss of Dicer fowls up centromeres. Nature Cell Biol. 6, 696-697 (2004).
26. Elgin, S. C. & Grewal, S. I. Heterochromatin: silence is golden. Curr. Biol. 13, R895-R898 (2003).
27. Verdel, A. et al. RNAi-mediated targeting of heterochromatin by the RITS complex. Science 303, 672-676 (2004).
28. Paik, W. K. & Kim, S. Enzymatic demethylation of calf thymus histones. Biochem. Biophys. Res. Commun. 51, 781-788 (1973).
29. Hakimi, M. A. et al. A core-BRAF35 complex containing histone deacetylase mediates repression of neuronal-specific genes. Proc. Natl Acad. Sci. USA 99, 7420-7425 (2002).
30. Shi, Y. J. et al. Coordinated histone modifications mediated by a CtBP corepressor complex. Nature 422, 735-738 (2003).
31. Metzger, E. et al. LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription. Nature advance online publication, 3 August 2005 (doi:10.1038/nature04020).
32. Boisvert, F. M., Chenard, C. A. & Richard, S. Protein interfaces in signalling regulated by arginine methylation. Sci. STKE doi:10.1126/stke. 2712005re2 (2005).
33. Lee, D. Y., Teyssier, C., Strahl, B. D. & Stallcup, M. R. Role of protein methylation in regulation of transcription. Endocr. Rev. 26, 147-170 (2005).
34. Strahl, B. D. et al. Methylation of histone H4 at arginine 3 occurs in vivo and is mediated by the nuclear receptor coactivator PRMT1. Curr. Biol. 11, 996-1000 (2001).
35. Metivier, R. et al. Estrogen receptor-alpha directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter. Cell 115, 751-763 (2003).
36. Vossenaar, E. R., Zendman, A. J., van Venrooij, W. J. & Pruijn, G. J. PAD, a growing family of citrullinating enzymes: genes, features and involvement in disease. Bioessays 25, 1106-1118 (2003).