메뉴 건너뛰기




Volumn 115, Issue 6, 2002, Pages 475-481

Phylogenetic relationships of Combretoideae (Combretaceae) inferred from plastid, nuclear gene and spacer sequences

Author keywords

Combretaceae; Combretoideae; Mangrove; Phylogeny; psaA ycf3 spacer; rbcL gene

Indexed keywords

ANOGEISSUS; CALYCOPTERIS; COMBRETACEAE; COMBRETUM; CONOCARPUS; LAGUNCULARIA; LUMNITZERA; QUISQUALIS; TERMINALIA;

EID: 21144458575     PISSN: 09189440     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10265-002-0059-1     Document Type: Article
Times cited : (41)

References (49)
  • 1
    • 0032442799 scopus 로고    scopus 로고
    • An ordinal classification for the families of flowering plants
    • Angiosperm Phylogeny Group (1998) An ordinal classification for the families of flowering plants. Ann Mo Bot Gard 85:531-553
    • (1998) Ann Mo Bot Gard , vol.85 , pp. 531-553
  • 4
    • 26044476263 scopus 로고
    • Engler A, Prantl KAE (eds) Engelmann, Leipzig
    • Brandis D (1898) In: Engler A, Prantl KAE (eds) Naturlichen Pflanzenfamilien, vol 3. Engelmann, Leipzig, p 115
    • (1898) Naturlichen Pflanzenfamilien , vol.3 , pp. 115
    • Brandis, D.1
  • 5
    • 84990452892 scopus 로고
    • A census of the Chinese species of Combretaceae
    • Chao A (1958) A census of the Chinese species of Combretaceae. Acta Phytotaxon Sin 7:225-252
    • (1958) Acta Phytotaxon Sin , vol.7 , pp. 225-252
    • Chao, A.1
  • 6
    • 0000031660 scopus 로고
    • Phylogenetics of seed plants: An analysis of nucleotide sequences from the plastid gene rbcL
    • Chase MW, Soltis DE, Olmstead RG, et al (1993) Phylogenetics of seed plants: an analysis of nucleotide sequences from the plastid gene rbcL. Ann Mo Bot Gard 80:528-580
    • (1993) Ann Mo Bot Gard , vol.80 , pp. 528-580
    • Chase, M.W.1    Soltis, D.E.2    Olmstead, R.G.3
  • 7
    • 0030061250 scopus 로고    scopus 로고
    • Circumscription of Myrtales and their relationships to other rosids: Evidence from rbcL sequence data
    • Conti E, Litt A, Sytsma KJ (1996) Circumscription of Myrtales and their relationships to other rosids: evidence from rbcL sequence data. Am J Bot 83:221-233
    • (1996) Am J Bot , vol.83 , pp. 221-233
    • Conti, E.1    Litt, A.2    Sytsma, K.J.3
  • 8
  • 10
    • 0000955376 scopus 로고
    • The order Myrtales: Circumscription, variation and relationships
    • Dahlgren R, Thorne RF (1984) The order Myrtales: circumscription, variation and relationships. Ann Mo Bot Gard 71:633-699
    • (1984) Ann Mo Bot Gard , vol.71 , pp. 633-699
    • Dahlgren, R.1    Thorne, R.F.2
  • 11
    • 0001546577 scopus 로고
    • Separate versus combined analysis of phylogenetic evidence
    • de Queiroz A, Donoghue MJ, Kim J (1995) Separate versus combined analysis of phylogenetic evidence. Annu Rev Ecol System 26:657-681
    • (1995) Annu Rev Ecol System , vol.26 , pp. 657-681
    • De Queiroz, A.1    Donoghue, M.J.2    Kim, J.3
  • 12
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19:11-15
    • (1987) Phytochem Bull , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 15
    • 26044451658 scopus 로고
    • The genera of Combretaceae
    • Exell AW (1931) The genera of Combretaceae. J Bot 69:113-128
    • (1931) J Bot , vol.69 , pp. 113-128
    • Exell, A.W.1
  • 16
    • 26044444627 scopus 로고
    • Combretaceae
    • van, Steenis CGGJ (ed) Noordhoff, Groningen
    • Exell AW (1954) Combretaceae. In: van, Steenis CGGJ (ed) Flora Malesiana, vol 4. Noordhoff, Groningen, pp 533-589
    • (1954) Flora Malesiana , vol.4 , pp. 533-589
    • Exell, A.W.1
  • 17
    • 0004548261 scopus 로고
    • Revision of the Combretaceae
    • Exell AW, Stace CA (1966) Revision of the Combretaceae. Bol Soc Bot 40:5-26
    • (1966) Bol Soc Bot , vol.40 , pp. 5-26
    • Exell, A.W.1    Stace, C.A.2
  • 19
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 20
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch WM (1971) Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20:406-416
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 21
    • 0022376704 scopus 로고
    • Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
    • Hasegawa M, Kishino H, Yano T (1985) Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J Mol Evol 22:160-160
    • (1985) J Mol Evol , vol.22 , pp. 160-160
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 22
    • 0034360457 scopus 로고    scopus 로고
    • A comparison of ITS nuclear rDNA sequence data and AFLP markers for phylogenetic studies in Phyllostachys (Bambusoideae, Poaceae)
    • Hodkinson TR, Renvoize SA, Ni Chonghaile G, Stapleton C, Chase MW (2000) A comparison of ITS nuclear rDNA sequence data and AFLP markers for phylogenetic studies in Phyllostachys (Bambusoideae, Poaceae). J Plant Res 113:259-269
    • (2000) J Plant Res , vol.113 , pp. 259-269
    • Hodkinson, T.R.1    Renvoize, S.A.2    Ni Chonghaile, G.3    Stapleton, C.4    Chase, M.W.5
  • 23
    • 0002334532 scopus 로고    scopus 로고
    • Phylogeny of basal eudicots based on three molecular data sets: AtpB, rbcL, and 18S nuclear ribosomal DNA sequences
    • Hoot SB, Magallon S, Crane PR (1999) Phylogeny of basal eudicots based on three molecular data sets: atpB, rbcL, and 18S nuclear ribosomal DNA sequences. Ann Mo Bot Gard 86:1-32
    • (1999) Ann Mo Bot Gard , vol.86 , pp. 1-32
    • Hoot, S.B.1    Magallon, S.2    Crane, P.R.3
  • 24
    • 0036176281 scopus 로고    scopus 로고
    • Phylogenetics in the Lythraceae sensu lato: A preliminary analysis based on plastic rbcL and psaA-ycf3 spacer, and ITS of nrDNA sequences
    • Huang Y, Shi S (2002) Phylogenetics in the Lythraceae sensu lato: a preliminary analysis based on plastic rbcL and psaA-ycf3 spacer, and ITS of nrDNA sequences. Int J Plant Sci 163:215-225
    • (2002) Int J Plant Sci , vol.163 , pp. 215-225
    • Huang, Y.1    Shi, S.2
  • 25
    • 0036090711 scopus 로고    scopus 로고
    • A new method for preparation of template DNA for PCR from special plant materials
    • Huang Y, Shi S, Zhong Y, Tan F (2002) A new method for preparation of template DNA for PCR from special plant materials. Chin Sci Bull 47:725-727
    • (2002) Chin Sci Bull , vol.47 , pp. 725-727
    • Huang, Y.1    Shi, S.2    Zhong, Y.3    Tan, F.4
  • 27
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111-120
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 28
    • 0030311441 scopus 로고    scopus 로고
    • Testing for phylogenetic conflict among molecular data sets in the tribe Triticeae (Gramineae)
    • Mason-Gamer RJ, Kellogg EA (1996) Testing for phylogenetic conflict among molecular data sets in the tribe Triticeae (Gramineae). Syst Biol 45:524-545
    • (1996) Syst Biol , vol.45 , pp. 524-545
    • Mason-Gamer, R.J.1    Kellogg, E.A.2
  • 29
    • 11944269526 scopus 로고
    • Testing species phylogenies and phylogenetic methods with congruence
    • Miyamoto MM, Fitch WM (1995) Testing species phylogenies and phylogenetic methods with congruence. Syst Biol 44:64-76
    • (1995) Syst Biol , vol.44 , pp. 64-76
    • Miyamoto, M.M.1    Fitch, W.M.2
  • 30
    • 0001507769 scopus 로고    scopus 로고
    • Genome size and polyploidy variation in the tropical hardwood genus Terminalia (Combretaceae)
    • Ohri D (1996) Genome size and polyploidy variation in the tropical hardwood genus Terminalia (Combretaceae). Plant Syst Evol 200:225-232
    • (1996) Plant Syst Evol , vol.200 , pp. 225-232
    • Ohri, D.1
  • 31
    • 26044442111 scopus 로고
    • The secondary phloem of some Combretaceae and the systematic position of Strephonema pseudocola A. Chev.
    • Outer RW, Fundter JM (1976) The secondary phloem of some Combretaceae and the systematic position of Strephonema pseudocola A. Chev. Acta Bot Neerl 25:481-493
    • (1976) Acta Bot Neerl , vol.25 , pp. 481-493
    • Outer, R.W.1    Fundter, J.M.2
  • 32
    • 0031406079 scopus 로고    scopus 로고
    • Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae)
    • Sang T, Crawfirdm DJ, Stuessy TF (1997) Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae). Am J Bot 84:1120-1136
    • (1997) Am J Bot , vol.84 , pp. 1120-1136
    • Sang, T.1    Crawfirdm, D.J.2    Stuessy, T.F.3
  • 33
    • 0028512129 scopus 로고
    • A stochastic model for the evolution of autocorrelated DNA sequences
    • Schoeniger M, von Haeseler A (1994) A stochastic model for the evolution of autocorrelated DNA sequences. Mol Phylogenet Evol 3:240-247
    • (1994) Mol Phylogenet Evol , vol.3 , pp. 240-247
    • Schoeniger, M.1    Von Haeseler, A.2
  • 35
    • 0036193540 scopus 로고    scopus 로고
    • Phylogenetic relationships of the Rhizophoraceae in China based on sequences of the chloroplast gene matK and the internal transcribed spacer regions of nuclear ribosomal DNA and combined data set
    • Shi S, Zhong Y, Huang Y, Du Y, Qiu X, Chang H (2002) Phylogenetic relationships of the Rhizophoraceae in China based on sequences of the chloroplast gene matK and the internal transcribed spacer regions of nuclear ribosomal DNA and combined data set. Biochem Syst Ecol 30:309-319
    • (2002) Biochem Syst Ecol , vol.30 , pp. 309-319
    • Shi, S.1    Zhong, Y.2    Huang, Y.3    Du, Y.4    Qiu, X.5    Chang, H.6
  • 36
    • 0025978390 scopus 로고
    • Fine structural features of the chloroplast genome: Comparison of the sequenced chloroplast genomes
    • Shimada H, Sugiura M (1991) Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes. Nucleic Acids Res 19:983-995
    • (1991) Nucleic Acids Res , vol.19 , pp. 983-995
    • Shimada, H.1    Sugiura, M.2
  • 38
    • 0028837216 scopus 로고
    • Discordance between nuclear and chloroplast phylogenies in the Heuchera group (Saxifragaceae)
    • Soltis DE, Kuzoff RK (1995) Discordance between nuclear and chloroplast phylogenies in the Heuchera group (Saxifragaceae). Evolution 49:727-742
    • (1995) Evolution , vol.49 , pp. 727-742
    • Soltis, D.E.1    Kuzoff, R.K.2
  • 39
    • 0032025585 scopus 로고    scopus 로고
    • Inferring complex phylogenies using parsimony: An empirical approach using three large DNA data sets for angiosperms
    • Soltis DE, Soltis PS, Mort ME, Chase MW, Savolainen V, Hoot SB, Morton CM (1998) Inferring complex phylogenies using parsimony: an empirical approach using three large DNA data sets for angiosperms. Syst Biol 47:32-42
    • (1998) Syst Biol , vol.47 , pp. 32-42
    • Soltis, D.E.1    Soltis, P.S.2    Mort, M.E.3    Chase, M.W.4    Savolainen, V.5    Hoot, S.B.6    Morton, C.M.7
  • 40
    • 0342504214 scopus 로고
    • Pollination mechanisms in genus Terminalia Linn
    • Srivastav PK (1993) Pollination mechanisms in genus Terminalia Linn. Ind For 119:147-150
    • (1993) Ind For , vol.119 , pp. 147-150
    • Srivastav, P.K.1
  • 41
    • 0000339271 scopus 로고
    • The significance of the leaf epidermis in the taxonomy of the Combretaceae, I. A. General review of tribal, generic and specific characters
    • Stace CA (1965) The significance of the leaf epidermis in the taxonomy of the Combretaceae, I. A. General review of tribal, generic and specific characters. Bot J Linn Soc 59:229-252
    • (1965) Bot J Linn Soc , vol.59 , pp. 229-252
    • Stace, C.A.1
  • 42
    • 0029836454 scopus 로고    scopus 로고
    • Quartet puzzling: A quartet maximum likelihood method for reconstructing tree topologies
    • Strimmer K, Von Haeseler A (1996) Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies. Mol Biol Evol 13:964-969
    • (1996) Mol Biol Evol , vol.13 , pp. 964-969
    • Strimmer, K.1    Von Haeseler, A.2
  • 43
    • 0031002417 scopus 로고    scopus 로고
    • Likelihood-mapping: A simple method to visualize phylogenetic content of a sequence alignment
    • USA
    • Strimmer K, Von Haeseler A (1997) Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment. Proc Natl Acad Sci USA 94:6815-6819
    • (1997) Proc Natl Acad Sci , vol.94 , pp. 6815-6819
    • Strimmer, K.1    Von Haeseler, A.2
  • 46
    • 0027157960 scopus 로고
    • Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
    • Tamura K, Nei M (1993) Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol 10:512-526
    • (1993) Mol Biol Evol , vol.10 , pp. 512-526
    • Tamura, K.1    Nei, M.2
  • 47
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal_X Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F (1997) The Clustal_X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3
  • 48
    • 0030256137 scopus 로고    scopus 로고
    • Phylogeny and biogeography of Panax L. (the ginseng genus, Araliaceae): Inferences from ITS sequences of nuclear ribosomal DNA
    • Wen J, Zimmer EA (1996) Phylogeny and biogeography of Panax L. (the ginseng genus, Araliaceae): inferences from ITS sequences of nuclear ribosomal DNA. Mol Phylogenet Evol 6:166-177
    • (1996) Mol Phylogenet Evol , vol.6 , pp. 166-177
    • Wen, J.1    Zimmer, E.A.2
  • 49
    • 0024744428 scopus 로고
    • Nucleotide sequences of the 5.8S rRNA gene and internal transcribed spacer regions in carrot and broad bean ribosomal DNA
    • Yokota Y, Kawata T, Lida Y, Kato A, Tanifuji S (1989) Nucleotide sequences of the 5.8S rRNA gene and internal transcribed spacer regions in carrot and broad bean ribosomal DNA. J Mol Evol 29:294-301
    • (1989) J Mol Evol , vol.29 , pp. 294-301
    • Yokota, Y.1    Kawata, T.2    Lida, Y.3    Kato, A.4    Tanifuji, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.