Nonspecific protein-carbohydrate complexes produced by nanoelectrospray ionization. Factors influencing their formation and stability

Analytical Chemistry

Volumn 77, Issue 10, 2005, Pages 3060-3071

  Wang, Weijie ^a   Kitova, Elena N ^a   Klassen, John S ^a  

^a UNIVERSITY OF ALBERTA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

CARBONIC ANHYDRASE (CA); NANOELECTROSPRAY (NANOES) PROCESS; NONSPECIFIC BINDING; UBIQUITIN (UBQ);

CARBOHYDRATES; CYCLOTRONS; DISSOCIATION; FOURIER TRANSFORMS; HYDROPHILICITY; MASS SPECTROMETRY; PROTEINS; RESONANCE; STABILITY;

COMPLEXATION;

CARBOHYDRATE; CARBONATE DEHYDRATASE; DISACCHARIDE; MONOSACCHARIDE; POLYSACCHARIDE; SODIUM CHLORIDE; TRISACCHARIDE; UBIQUITIN;

ARTICLE; COMPLEX FORMATION; DISSOCIATION; ELECTROSPRAY; FOURIER TRANSFORMATION; HYDROPHILICITY; HYDROPHOBICITY; ION CYCLOTRON RESONANCE MASS SPECTROMETRY; PROTEIN CARBOHYDRATE INTERACTION; PROTEIN STRUCTURE; PROTON TRANSPORT; THERMAL ANALYSIS;

CARBOHYDRATES; CARBONIC ANHYDRASES; HYDROGEN BONDING; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; HYDROPHOBICITY; KINETICS; NANOTECHNOLOGY; PROTEIN BINDING; PROTEINS; PROTONS; SALTS; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; TEMPERATURE; UBIQUITIN;

EID: 18844403312     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac048433y     Document Type: Article

References (81)

1. Hutchens, T. W.; Allen, M. H.; Li, C. M.; Tip, T. T. Febs Lett. 1992, 309, 170-174.
2. Hu, P. F.; Ye, Q. Z.; Loo, J. A. Anal. Chem. 1994, 66, 4190-4194.
3. Feng, R.; Castelhano, A. L.; Billedeau, R.; Yuan, Z. Y. J. Am. Soc. Mass Spectrom. 1995, 6, 1105-1111.
4. Gale, D. C.; Smith, R. D. J. Am. Soc. Mass Spectrom. 1995, 6, 1154-1164.
5. Cheng, X. H.; Harms, A. C.; Goudreau, P. N.; Terwilliger, T. C.; Smith, R. D. Proc. Natl. Acad. Sci. U.S.A. 1996, 93, 7022-7027.
6. Loo, J. A. Mass Spectrom. Rev. 1997, 16, 1-23.
7. Nemirovskiy, O. V.; Ramanathan, R.; Gross, M. L. J. Am. Soc. Mass Spectrom. 1997, 8, 809-812.
8. Cheng, X.; Chen, R.; Bruce, J. E.; Schwartz, B. L.; Anderson, G. A.; Hofstadler, S. A.; Gale, D. C.; Smith, R. D.; Gao, J.; Sigal, G. B.; Mammen, M.; Whitesides, G. M. J. Am. Chem. Soc. 1995, 117, 8859-8860.
9. Blair, S. M.; Kempen, E. C.; Brodbelt J. S. J. Am. Soc. Mass Spectrom. 1998, 9, 1049-1059.
10. Loo, J. A.; Holler, T. P.; Foltin, S. K.; McConnell, P.; Banotai, C. A.; Horne, N. M.; Mueller, W. T.; Stevenson, T. I.; Mack, D. P. Proteins: Struct. Funct. Genet. Suppl. 1998, 2, 28-37.
11. Rostom, A. A.; Tame, J. R. H.; Ladbury, J. E.; Robinson. C. V. J. Mol. Biol. 2000, 296, 269-279.
12. Hill, T. J.; Lafitte, D.; Wallace, J. I.; Cooper, H. J.; Tsvetkov, P. O.; Derrick, P. J. Biochemistry 2000, 39, 7284-7290.
13. Greig, M. J.; Gaus, H.; Cummins, L. L.; Sasmor, H.; Griffey, R. H. J. Am. Chem. Soc. 1995, 117, 10765-10766.
14. Loo, J. A.; Hu, P.; McConnell, P.; Mueller, W. T.; Sawyer, T. K.; Thanabal, V. J. Am. Soc. Mass Spectrom. 1997, 8, 234-243.
15. Jørgensen, T. J. D.; Roepstorff, P.; Heck, A. J. R. Anal. Chem. 1998, 70, 4427-4432.
16. Ayed, A.; Krutchinsky, A. N.; Ens, W.; Standing, K. G.; Duckworth, H. W. Rapid Commun. Mass Spectrom. 1998, 12, 339-344.
17. Sannes-Lowery, K. A.; Griffey, R. H.; Hofstadler, S. A. Anal. Biochem. 2000, 280, 264-271.
18. Kempen, E. C.; Brodbelt, J. S. Anal. Chem. 2000, 72, 5411-5416.
19. Kitova, E. N.; Kitova, P. I.; Bundle, D. R.; Klassen, J. S. Glycobiology 2001, 11, 605-611.
20. Wang, W.; Kitova, E. N.; Klassen, J. S. Anal. Chem. 2003, 75, 4945-4955.
21. Gabelica, V.; Galic, N.; Rosu, F.; Houssier, C.; De Pauw, E. J. Mass Spectrom. 2003, 38, 491-501.
22. Zhang, S.; Van Pelt, C. K.; Wilson, D. B. Anal. Chem. 2003, 75, 3010-3018.
23. Hagan, N.; Fabris, D. Biochemistry, 2003, 42, 10736-10745.
24. Tjernberg, A.; Carnö, S.; Oliv, F.; Benkestock, K.; Edlund, P.-O.; Griffiths, W, J.; Hallén, D. Anal. Chem. 2004, 76, 4325-4331.
25. Daneshfar, R.; Kitova, E. N.; Klassen, J. S. J. Am. Chem. Soc. 2004, 126, 4786-4787.
26. Benesch, J. L. P.; Sobott, F.; Robinson, C. V. Anal. Chem. 2003, 75, 2208-2214.
27. McCammon, M. G.; Scott, D. J.; Keetch, C. A.; Greene, L. H.; Purkey, H. E.; Petrassi, H. M.; Kelly, J. W.; Robinson, C. V. Structure 2002, 10, 851-863.
28. Aquilina, J. A.; Benesch, J. L. P.; Bateman, O. A.; Slingsby, C.; Robinson, C. V. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 10611-10616.
29. Sobott, F.; Robinson, C. V. Int. J. Mass Spectrom. 2004, 236, 25-32.
30. Light-Wahl, K. J.; Schwartz, B. L.; Smith, R. D. J. Am. Chem. Soc. 1994, 116, 5271-5278.
31. Nettleton, E. J.; Sunde, M.; Lai, Z.; Kelly, J. W.; Dobson, C. M.; Robinson, C. V. J. Mol. Biol. 1998, 281, 553-564.
32. Rostom, A. A.; Robinson, C. V. J. Am. Chem. Soc. 1999, 121, 4718-4719.
33. McCammon, M. G.; Hernández, H.; Sobott, F.; Robinson, C. V. J. Am. Chem. Soc. 2004, 126, 5950-5951.
34. Smith, D. L.; Zhang, Z. Mass Spectrom. Rev. 1994, 13, 411-429.
35. Smith, R. D.; Brace, J. E.; Wu, Q.; Lei, Q. P. Chem. Soc. Rev. 1997, 26, 191-202.
36. Loo, J. A. Int. J. Mass Spectrom. 2000, 200, 175-186.
37. Hofstadler, S. A.; Griffey, R. H. Chem. Rev. 2001, 101, 377-390.
38. Daniel, J. M.; Friess, S. D.; Rajagopalan, S.; Wendt, S.; Zenobi, R. Int. J. Mass Spectrom. 2002, 216, 1-27.
39. Heck, A. J. R.; van den Heuvel, R. H. H. Mass Spectrom. Rev. 2004, 23, 368-389.
40. Speir, J. P.; Senko, M. W.; Little, D. P.; Loo, J. A.; McLafferty, F. W. J. Mass Spectrom. 1995, 30, 39-42.
41. Little, D. P.; McLafferty, F. W. J. Am. Soc. Mass Spectrom. 1996, 7, 209-210.
42. Tolić, L. P.; Bruce, J. E.; Lei, Q. P.; Anderson, G. A.; Smith, R. D. Anal. Chem. 1998, 70, 405-408.
43. Robinson, C. V.; Chung, E. W.; Kragelund, B. B.; Knudsen, J.; Aplin, R. T.; Poulsen, F. M.; Dobson, C. M. J. Am. Chem. Soc. 1996, 118, 8646-8653.
44. Smith, R. D.; Light-Wahl, K. J. Biol. Mass Spectrom. 1993, 22, 493-501.
45. Gao, J.; Wu, Q.; Carbeck, J.; Lei, P.; Smith, R. D.; Whitesides, G. M. Biophys. J. 1999, 76, 3253-3260.
46. Gabelica, V.; Galic, N.; De Pauw, E. J. Am. Soc. Mass Spectrom. 2002, 13, 946-953.
47. Jergensen, T. J. D.; Hvelplund, P.; Anderson, J. U.; Roepstorff, P. Int. J. Mass Spectrom. 2002, 219, 659-670.
48. Zehl, M.; Allmaier, G. Rapid Commun. Mass Spectrom. 1998, 12, 339-344.
49. van der Kerk-van Hoof, A.; Heck, A. J. R. J. Mass Spectrom. 1999, 34, 813-819.
50. Wang, W.; Kitova, E. N.; Klassen, J. S. J. Am. Chem. Soc. 2003, 125, 13630-13631.
51. Price, W. D.; Schnier, P. D.; Jockusch, R. A.; Strittmatter, E. F.; Williams, E. R. J. Am. Chem. Soc. 1996, 118, 10640-10644.
52. Dunbar, R. C.; McMahon, T. B. Science 1998, 279, 194-197.
53. Felitsyn, N.; Kitova, E. N.; Klassen, J. S. Anal. Chem. 2001, 73, 4647-4661.
54. Wang, W.; Kitova, E. N.; Sun, J.; Klassen, J. S. Manuscript submitted.
55. Dole, M.; Mack, L. L.; Hines, R. L.; Mobley, R. C.; Ferguson, L. D.; Alice, M. B. J. Chem. Phys. 1968, 49, 2240-2249.
56. Peschke, M.; Verkerk, U.; Kebarle, P. J. Am. Soc. Mass Spectrom. 2004, 15, 1424-1434.
57. Gomez, A.; Tang, K. Phys. Fluids 1994, 6, 404-414.
58. Iribarne, J. V.; Thomson, B. A. J. Chem. Phys. 1976, 64, 2287-2294.
59. Thomson, B. A.; Iribarne, J. V. J. Chem. Phys. 1979, 71, 4451-4463.
60. Kebarle, P.; Tang, L. Anal. Chem. 1993, 65, 927A-986A.
61. Tang, L.; Kebarle, P. Anal. Chem. 1993, 65, 3654-3668.
62. Schmidt, A.; Karas, M.; Dülcks, T. J. Am. Soc. Mass Spectrom. 2003, 14, 8646-8653.
63. Meng, C. K.; Fenn, J. B. Org. Mass Spectrum. 1991, 26, 542-549.
64. Julian, R. R.; Hodyss, R.; Beauchamp, J. L. J. Am. Chem. Soc. 2001, 123, 3577-3583.
65. Jurchen; J. C.; Cooper, R. E.; Williams, E. R. J. Am. Soc. Mass Spectrom. 2003, 14, 1477-1487.
66. Jurchen, J. C.; Garcia, D. E.; Williams, E. R. J. Am. Soc. Mass Spectrom. 2003, 14, 1373-1386.
67. Anacleto, J. F.; Heasance, S.; Boyd, R. K. Org. Mass Spectrom. 1992, 27, 660-666.
68. Wang, G.; Cole, R. B. Anal Chem. 1994, 66, 3702-3708.
69. Hop, C. E. C. A.; Saulys, D. A.; Gaines, D. F. J. Am. Soc. Mass Spectrom. 1995, 6, 860-865.
70. Zhou, S. L.; Hamburger, M. Rapid Commun. Mass Spectrom. 1996, 10, 797-800.
71. Wang, G.; Cole, R. B. Anal. Chem. 1998, 70, 873-881.
72. Gamero-Castano, M.; de la Mora, J. F. J. Mass Spectrom. 2000, 35, 790-803.
73. Kebarle, P.; Peschke, M. Anal. Chim. Acta 2000, 406, 11-35.
74. Gamero-Castano, M.; de la Mora, J. F. Anal Chim. Acta 2000, 406, 67-91.
75. Hofstadler, S. A.; Sannes-Lowery, K. A. J. Am. Soc. Mass Spectrom. 2000, 11, 1-9.
76. Vijay-Kumar, S.; Bugg, C. E.; Cook, W. J. J. Mol. Biol. 1987, 194, 531-544.
77. Di Stefano, D. L.; Wand, A. J. Biochemistry 1987, 26, 7272-7281.
78. Pan, Y.; Briggs, M. S. Biochemistry 1992, 31, 11405-11412.
79. The molecular surface area calculations were performed using Hyperchem version 7.51 (Hypercube Inc, Gainsville, FL). A solvent probe radius of 1.4 Å was used. The crystal structure of the human CA II isozyme was used to estimate the surface area of bovine CA II.
80. Clemmer, D. E.; Hudgins, R.; Jarrold, M. F. J. Am. Chem. Soc. 1995, 117, 10141-10142.
81. Shelimov, K. B.; Clemmer, D. E.; Hudgins, R. R.; Jarrold, M. F. J. Am. Chem. Soc. 1997, 119, 2240-2248.