Role of oxidative carbonylation in protein quality control and senescence

EMBO Journal

Volumn 24, Issue 7, 2005, Pages 1311-1317

  Nyström, Thomas ^a  

^a UNIVERSITY OF GOTHENBURG   (Sweden)

Author keywords

Damage segregation; Mistranslation; Protein carbonylation; Proteolysis; Senescence

Indexed keywords

CARBONYL DERIVATIVE; CELL ENZYME; PROTEIN; REACTIVE OXYGEN METABOLITE; SILENT INFORMATION REGULATOR PROTEIN 2;

AGING; ALZHEIMER DISEASE; CANCER; CARBONYLATION; CELL CULTURE; CELL DESTRUCTION; CELL DIVISION; CHEMICAL REACTION; CYTOKINESIS; CYTOTOXICITY; DISULFIDE BOND; GERIATRIC DISORDER; HUMAN; LONGEVITY; MITOSIS; MOLECULAR WEIGHT; NEUROPATHOLOGY; NONHUMAN; OXIDATIVE STRESS; PARKINSON DISEASE; PRIORITY JOURNAL; PROTEIN AGGREGATION; PROTEIN CONFORMATION; PROTEIN DEFECT; PROTEIN DEGRADATION; PROTEIN MODIFICATION; PROTEIN QUALITY; PROTEIN STRUCTURE; QUALITY CONTROL; REVIEW; SENESCENCE; STRESS;

AGE FACTORS; AGING; AMINO ACIDS; MULTIPROTEIN COMPLEXES; ORGANOMETALLIC COMPOUNDS; OXIDATION-REDUCTION; PROTEIN TRANSPORT; PROTEINS; REACTIVE OXYGEN SPECIES;

EID: 17844403545     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1038/sj.emboj.7600599     Document Type: Review

References (58)

1. Agarwal S, Sohal RS (1994) Aging and proteolysis of oxidized proteins. Arch Biochem Biophys 309: 24-28
2. 0 cells of Saccharomyces cerevisiae depends on the state rather than rate of respiration and is enhanced in pos9 but not yap1 mutants. J Biol Chem 276: 35396-35404
3. Aguilaniu H, Gustafsson L, Rigoulet M, Nyström T (2003) Asymmetric inheritance of oxidatively damaged proteins during cytokinesis in Saccharomyces cerevisiae: a Sir2p dependent mechanism. Science 299: 1751-1753
4. Ballesteros M, Fredriksson A, Henriksson J, Nyström T (2001) Bacterial senescence: protein oxidation in non-proliferating cells is dictated by the accuracy of the ribosomes. EMBO J 20: 5280-5289
5. Barak Z, Gallant J, Lindsley D, Kwieciszewki B, Heidel D (1996) Enhanced ribosome frameshifting in stationary phase cells. J Mol Biol 263: 140-148
6. Bota DA, Davies KJ (2002) Lon protease preferentially degrades oxidized mitochondrial aconitase by an ATP-stimulated mechanism. Nat Cell Biol 4: 674-680
7. Bota DA, Van Remmen H, Davies KJ (2002) Modulation of Lon protease activity and aconitase turnover during aging and oxidative stress. FEBS Lett 532: 103-106
8. Cabiscol E, Piulats E, Echave P, Herrero E, Ros J (2000) Oxidative stress promotes specific protein damage in Saccharomyces cerevisiae. J Biol Chem 275: 27393-27398
9. Castegna A, Aksenov M, Aksenova M, Thongboonkerd V, Klein JB, Pierce WM, Booze R, Markesbery WR, Butterfield DA (2002) Proteomic identification of oxidatively modified proteins in Alzheimer's disease brain. Part I: creatine kinase BB, glutamine synthase, and ubiquitin carboxy-terminal hydrolase L-1. Free Radic Biol Med 33: 562-571
10. Dalle-Donne I, Giustarini D, Colombo R, Rossi R, Milzani A (2003) Protein carbonylation in human diseases. Trends Mol Med 9: 169-176
11. Davies KJ, Delsignore ME (1987) Protein damage and degradation by oxygen radicals. III. Modification of secondary and tertiary structure. J Biol Chem 262: 9908-9913
12. Davies KJ, Delsignore ME, Lin SW (1987) Protein damage and degradation by oxygen radicals. II. Modification of amino acids. J Biol Chem 262: 9902-9907
13. Desmyter L, Dewaele S, Verstraelen J, Nyström T, Contreras R, Chen C (2004) Expression of the human ferritin light chain in a budding yeast frataxin mutant affects aging and cell death. Exp Gerontol 39: 707-715
14. Desnues B, Gregori G, Dukan S, Aguilaniu H, Nyström T (2003) Differential oxidative damage and expression of stress regulons in culturable and nonculturable cells of Escherichia coli. EMBO Rep 4: 400-405
15. Dukan S, Farewell A, Ballesteros M, Taddei F, Radman M, Nyström T (2000) Protein oxidation in response to increased transcriptional or translational errors. Proc Natl Acad Sci USA 97: 5746-5749
16. Dukan S, Nyström T (1998) Bacterial senescence: stasis results in increased and differential oxidation of cytoplasmic proteins leading to developmental induction of the heat shock regulon. Genes Dev 12: 3431-3441
17. Dukan S, Nyström T (1999) Oxidative stress defense and deterioration of growth-arrested Escherichia coli cells. J Biol Chem 274: 26027-26032
18. Egilmez NK, Jazwinski SH (1989) Evidence for the involvement of a cytoplasmic factor in the aging of the yeast Saccharomyces cerevisiae. J Bacteriol 171: 37-42
19. Friguet B, Bulteau AL, Chondrogianni N, Conconi M, Petropoulos I (2000) Protein degradation by the proteasome and its implications in aging. Ann NY Acad Sci 908: 143-154
20. Grune T, Jung T, Merker K, Davies KJA (2004) Decreased proteolysis caused by protein aggregates, inclusion bodies, plaques, lipofuscin, ceroid, and 'aggresomes' during oxidative stress, aging, and disease. Int J Biochem Cell Biol 36: 2519-2530
21. Grune T, Merker K, Sandig G, Davies KJ (2003) Selective degradation of oxidatively modified protein substrates by the proteasome. Biochem Biophys Res Commun 305: 709-718
22. Guarente L (2000) Sir2 links chromatin silencing, metabolism, and aging. Genes Dev 14: 1021-1026
23. Hlavata L, Aguilaniu H, Pichova A, Nystrom T (2003) The oncogenic RAS2(val19) mutation locks respiration, independently of PKA, in a mode prone to generate ROS. EMBO J 22: 3337-3345
24. Jazwinski SM (2004) Yeast replicative life span-the mitochondrial connection. FEMS Yeast Res 5: 119-125
25. Ji LL, Dillon D, Wu E (1990) Alteration of antioxidant enzymes with aging in rat skeletal muscle and liver. Am J Physiol 258: 918-923
26. Johansson EC, Olsson O, Nystrom T (2004) Progression and specificity of protein oxidation in the life cycle of Arabidopsis thaliana. J Biol Chem 279: 22204-22208
27. Kristensen BK, Askerlund P, Bykova NV, Egsgaard H, Moller IM (2004) Identification of oxidised proteins in the matrix of rice leaf mitochondria by immunoprecipitation and two-dimensional liquid chromatography-tandem mass spectrometry. Phytochemistry 65: 1839-1851
28. Lass A, Sohal BH, Weindruch R, Forster MJ, Sohal RS (1998) Caloric restriction prevents age-associated accrual of oxidative damage to mouse skeletal muscle mitochondria. Free Radic Biol Med 25: 1089-1097
29. Levine RL (1983) Oxidative modification of glutamine synthetase. I. Inactivation is due to loss of one histidine residue. J Biol Chem 258: 11823-11827
30. Levine RL (2002) Carbonyl modified proteins in cellular regulation, aging, and disease. Free Radic Biol Med 32: 790-796
31. Levine RL, Oliver CN, Fulks RM, Sladtman ER (1981) Turnover of bacterial glutamine synthetase: oxidative inactivation precedes proteolysis. Proc Natl Acad Sci USA 78: 2120-2124
32. Miller CG (1987) Protein degradation and proteolytic modification. In Escherichia coli and Salmonella typhimurium, Cellular and Molecular Biology, Neidhardt FC (ed) pp 680-691. Washington, DC: ASM press
33. Nyström T (2002) Translational fidelity, protein oxidation, and senescence: lessons from bacteria. Aging Res Rev 1: 693-703
34. Nyström T (2004) Stationary phase physiology. Ann Rev Microbiol 58: 161-181
35. O'Farrell PH (1978) The suppression of defective translation by ppGpp and its role in the stringent response. Cell 14: 545-557
36. Oliver CN, Ahn BW, Moerman EJ, Goldstein S, Stadtman ER (1987) Age-related changes in oxidized proteins. J Biol Chem 262: 5488-5491
37. Requena JR, Chao C-C, Levine RL, Stadtman ER (2001) Glutamic and aminoadipic semialdehydes are the main carbonyl products of metal-catalyzed oxidation of proteins. Proc Natl Acad Sci USA 98: 69-74
38. Requena JR, Levine RL, Stadtman ER (2003) Recent advances in the analysis of oxidized proteins. Amino Acids 25: 221-226
39. Rivett AJ, Levine RL (1990) Metal-catalyzed oxidation of Escherichia coli glutamine synthetase: correlation of structural and functional changes. Arch Biochem Biophys 278: 26-34
40. Rogina B, Helfand SL (2004) Sir2 mediates longevity in the fly through a pathway related to calorie restriction. Proc Natl Acad Sci USA 101: 15998-16003
41. Roseman JE, Levine RL (1987) Purification of a protease from Escherichia coli with specificity for oxidized glutamine synthetase. J Biol Chem 262: 2101-2110
42. Shringarpure R, Davies KJ (2002) Protein turnover by the proteasome in aging and disease. Free Radic Biol Med 32: 1084-1089
43. Shringarpure R, Grune T, Mehlhase J, Davies KJ (2003) Ubiquitin conjugation is not required for the degradation of oxidized proteins by proteasome. J Biol Chem 278: 311-318
44. Sinclair DA (2002) Paradigms and pitfalls of yeast longevity research. Mech Ageing Dev 123: 857-867
45. Sinclair DA, Guarente L (1997) Extrachromosomal rDNA circles - a cause of aging in yeast. Cell 91: 1033-1042
46. Sitte N, Merker K, von Zglinicki T, Grune T, Davies KJA (2000) Protein oxidation and degradation during cellular senescence of human BJ fibroblasts: part I-effects of proliferative senescence. FASEB J14: 2495-2502
47. Stadtman ER (1992) Protein oxidation and aging. Science 257: 1220-1224
48. Stadtman ER (2001) The story of glutamine synthetase regulation. J Biol Chem 276: 44357-44364
49. Stadtman ER, Levine RL (2000) Protein oxidation. Ann NY Acad Sci 899: 191-208
50. Sohal RS (2002) Role of oxidative stress and protein oxidation in the aging process. Free Radic Biol Med 33: 37-44
51. Sohal RS, Agarwal S, Dubey A, Orr WC (1993) Protein oxidative damage is associated with life expectancy of houseflies. Proc Natl Acad Sci USA 90: 7255-7259
52. Sohal RS, Agarwal S, Sohal BH (1995) Oxidative stress and aging in the Mongolian gerbil (Meriones unguiculatus). Mech Ageing Dev 81: 15-25
53. Sohal RS, Weindruch R (1996) Oxidative stress, caloric restriction, and aging. Science 273: 59-63
54. Tamarit J, Cabiscol E, Ros J (1998) Identification of the major oxidatively damaged proteins in Escherichia coli cells exposed to oxidative stress. J Biol Chem 273: 3027-3032
55. Tissenbaum HA, Guarente L (2001) Increased dosage of a sir-2 gene extends lifespan in Caenorhabditis elegans. Nature 410: 227-230
56. Yan LJ, Levine RL, Sohal RS (1997) Oxidative damage during aging targets mitochondrial aconitase. Proc Natl Acad Sci USA 94: 11168-11172
57. Yan LJ, Sohal RS (1998) Mitochondrial adenine nucleotide translocase is modified oxidatively during aging. Proc Natl Acad Sci USA 95: 12896-12901
58. Wenthzel AM, Stancek M, Isaksson LA (1998) Growth phase dependent stop codon readthrough and shift of translation reading frame in Escherichia coli. FEBS Lett 421: 237-242