-
1
-
-
0023663881
-
The telomere terminal transferase of tetrahymena is a ribonucleoprotein enzyme with two kinds of primer specificity
-
C.W. Greider, and E.H. Blackburn The telomere terminal transferase of tetrahymena is a ribonucleoprotein enzyme with two kinds of primer specificity Cell 51 1987 887 898
-
(1987)
Cell
, vol.51
, pp. 887-898
-
-
Greider, C.W.1
Blackburn, E.H.2
-
2
-
-
0037148270
-
New ways to make the ends meet: Telomerase, DNA damage proteins and heterochromatin
-
S.W.-L. Chan, and E.H. Blackburn New ways to make the ends meet: telomerase, DNA damage proteins and heterochromatin Oncogene 21 2002 553 563
-
(2002)
Oncogene
, vol.21
, pp. 553-563
-
-
Chan, S.W.-L.1
Blackburn, E.H.2
-
4
-
-
2342590632
-
Detection of telomerase activity, telomerase RNA component, and telomerase reverse transcriptase in human hepatocellular carcinoma
-
M. Shimojima, F. Komine, H. Hisatomi, T. Shimizu, M. Moriyama, and Y. Arakawa Detection of telomerase activity, telomerase RNA component, and telomerase reverse transcriptase in human hepatocellular carcinoma Hepatol. Res. 29 2004 31 38
-
(2004)
Hepatol. Res.
, vol.29
, pp. 31-38
-
-
Shimojima, M.1
Komine, F.2
Hisatomi, H.3
Shimizu, T.4
Moriyama, M.5
Arakawa, Y.6
-
5
-
-
0034597794
-
Telomere states and cell fates
-
E.H. Blackburn Telomere states and cell fates Nature 408 2000 53 56
-
(2000)
Nature
, vol.408
, pp. 53-56
-
-
Blackburn, E.H.1
-
6
-
-
3042736699
-
Telomerase: A potential molecular market and therapeutic target for cancer
-
J.Y. Chang Telomerase: a potential molecular market and therapeutic target for cancer J. Surg. Oncol. 87 2004 1 3
-
(2004)
J. Surg. Oncol.
, vol.87
, pp. 1-3
-
-
Chang, J.Y.1
-
8
-
-
0036782884
-
Telomerase: A target for cancer therapeutics
-
J.W. Shay, and W.E. Wright Telomerase: a target for cancer therapeutics Cancer Cell 2 2002 257 265
-
(2002)
Cancer Cell
, vol.2
, pp. 257-265
-
-
Shay, J.W.1
Wright, W.E.2
-
10
-
-
4344614197
-
Analytical validation of telomerase activity for cancer early detection
-
J.P. Jakupciak, W. Wang, P.E. Barker, S. Srivastava, and D.H. Atha Analytical validation of telomerase activity for cancer early detection J. Mol. Diag. 6 2004 157 165
-
(2004)
J. Mol. Diag.
, vol.6
, pp. 157-165
-
-
Jakupciak, J.P.1
Wang, W.2
Barker, P.E.3
Srivastava, S.4
Atha, D.H.5
-
11
-
-
0033535962
-
The telomerase RNA pseudoknot is critical for the stable assembly of a catalytically active ribonucleoprotein
-
D. Gilley, and E.H. Blackburn The telomerase RNA pseudoknot is critical for the stable assembly of a catalytically active ribonucleoprotein PNAS USA 96 1999 6621 6625
-
(1999)
PNAS USA
, vol.96
, pp. 6621-6625
-
-
Gilley, D.1
Blackburn, E.H.2
-
12
-
-
0037168615
-
A molecular switch underlies a human telomerase disease
-
L.R. Comolli, I. Smirnov, L. Xu, E.H. Blackburn, and T.L. James A molecular switch underlies a human telomerase disease PNAS 99 2002 16998 17003
-
(2002)
PNAS
, vol.99
, pp. 16998-17003
-
-
Comolli, L.R.1
Smirnov, I.2
Xu, L.3
Blackburn, E.H.4
James, T.L.5
-
13
-
-
0037082416
-
Analysis of the structure of human telomerase RNA in vivo
-
M. Antal, E. Boros, F. Solymosy, and T. Kiss Analysis of the structure of human telomerase RNA in vivo Nucl. Acids Res. 30 2002 912 920
-
(2002)
Nucl. Acids Res.
, vol.30
, pp. 912-920
-
-
Antal, M.1
Boros, E.2
Solymosy, F.3
Kiss, T.4
-
14
-
-
0035960043
-
The RNA component of telomerase is mutated in autosomal dominant dyskeratosis congenital
-
T. Vulliamy, A. Marrone, F. Goldman, A. Dearlove, M. Bessler, P.J. Mason, and I. Dokal The RNA component of telomerase is mutated in autosomal dominant dyskeratosis congenital Nature 413 2001 432 435
-
(2001)
Nature
, vol.413
, pp. 432-435
-
-
Vulliamy, T.1
Marrone, A.2
Goldman, F.3
Dearlove, A.4
Bessler, M.5
Mason, P.J.6
Dokal, I.7
-
15
-
-
0037829618
-
A novel pseudoknot element is essential for the action of a yeast telomerase
-
Y. Tzfati, Z. Knight, J. Roy, and E.H. Blackburn A novel pseudoknot element is essential for the action of a yeast telomerase Genes Develop. 17 2003 1779 1788
-
(2003)
Genes Develop.
, vol.17
, pp. 1779-1788
-
-
Tzfati, Y.1
Knight, Z.2
Roy, J.3
Blackburn, E.H.4
-
16
-
-
1842813934
-
Telomerase RNA structure and function: Implications for dyskeratosis congenital
-
J.-L. Chen, and C.W. Greider Telomerase RNA structure and function: implications for dyskeratosis congenital Trends Biochem. Sci. 29 2004 183 192
-
(2004)
Trends Biochem. Sci.
, vol.29
, pp. 183-192
-
-
Chen, J.-L.1
Greider, C.W.2
-
17
-
-
0037457985
-
Mutations linked to dyskeratosis congenital cause changes in the structural equilibrium in telomerase RNA
-
C.A. Theimer, L.D. Finger, L. Trantirek, and J. Feigon Mutations linked to dyskeratosis congenital cause changes in the structural equilibrium in telomerase RNA PNAS 100 2003 449 454
-
(2003)
PNAS
, vol.100
, pp. 449-454
-
-
Theimer, C.A.1
Finger, L.D.2
Trantirek, L.3
Feigon, J.4
-
18
-
-
0344874270
-
YNMG tetraloop formation by a dyskeratosis congenital mutation in human telomerase RNA
-
C.A. Theimer, L.D. Finger, and J. Feigon YNMG tetraloop formation by a dyskeratosis congenital mutation in human telomerase RNA RNA 9 2003 1446 1455
-
(2003)
RNA
, vol.9
, pp. 1446-1455
-
-
Theimer, C.A.1
Finger, L.D.2
Feigon, J.3
-
19
-
-
3042554001
-
An algorithm for computing nucleic acid base-pairing probabilities including pseudoknots
-
R.M. Dirks, and N.A. Pierce An algorithm for computing nucleic acid base-pairing probabilities including pseudoknots J. Comp. Chem. 25 2004 1295 1304
-
(2004)
J. Comp. Chem.
, vol.25
, pp. 1295-1304
-
-
Dirks, R.M.1
Pierce, N.A.2
-
20
-
-
0032560959
-
Continuum solvent studies of the stability of DNA, RNA, and phosphoramidate-DNA helices
-
J. Srinivasan, T.E. Cheatham III, P. Cieplak, P.A. Kollman, and D.A. Case Continuum solvent studies of the stability of DNA, RNA, and phosphoramidate-DNA helices J. Am. Chem. Soc. 120 1998 9401 9409
-
(1998)
J. Am. Chem. Soc.
, vol.120
, pp. 9401-9409
-
-
Srinivasan, J.1
Cheatham III, T.E.2
Cieplak, P.3
Kollman, P.A.4
Case, D.A.5
-
21
-
-
0035951296
-
Molecular dynamics simulation reveals conformational switching of water-mediated uracil-cytosine base-pairs in an RNA duplex
-
C. Schneider, M. Brandl, and J. Sühnel Molecular dynamics simulation reveals conformational switching of water-mediated uracil-cytosine base-pairs in an RNA duplex J. Mol. Biol. 305 2001 659 667
-
(2001)
J. Mol. Biol.
, vol.305
, pp. 659-667
-
-
Schneider, C.1
Brandl, M.2
Sühnel, J.3
-
22
-
-
0036297661
-
RNA simulations: Probing hairpin unfolding and the dynamics of a GNRA tetraloop
-
E.J. Sorin, M.A. Engelhardt, D. Herschlag, and V.S. Pande RNA simulations: probing hairpin unfolding and the dynamics of a GNRA tetraloop J. Mol. Biol. 317 2002 493 506
-
(2002)
J. Mol. Biol.
, vol.317
, pp. 493-506
-
-
Sorin, E.J.1
Engelhardt, M.A.2
Herschlag, D.3
Pande, V.S.4
-
23
-
-
0037440163
-
Binding interactions between the core central domain of 16 S rRNA and the ribosomal protein S15 determined by molecular dynamics simulations
-
W. Li, B. Ma, and B.A. Shapiro Binding interactions between the core central domain of 16 S rRNA and the ribosomal protein S15 determined by molecular dynamics simulations Nucl. Acids Res. 31 2003 629 638
-
(2003)
Nucl. Acids Res.
, vol.31
, pp. 629-638
-
-
Li, W.1
Ma, B.2
Shapiro, B.A.3
-
24
-
-
0035700275
-
Molecular dynamics simulations of the denaturaation and refolding of an RNA tetraloop
-
W. Li, B. Ma, and B.A. Shapiro Molecular dynamics simulations of the denaturaation and refolding of an RNA tetraloop J. Biomol. Struct. Dynam. 19 2001 381 396
-
(2001)
J. Biomol. Struct. Dynam.
, vol.19
, pp. 381-396
-
-
Li, W.1
Ma, B.2
Shapiro, B.A.3
-
25
-
-
0035834495
-
Molecular dynamics of the frame-shifting pseudoknot from Beet Western Yellows virus: The role of non-Watson-Crick base-pairing, ordered hydration, cation binding and base mutations on stability and unfolding
-
K. Csaszar, N. Špačková, R. Štefl, J. Šponer, and N.B. Leontis Molecular dynamics of the frame-shifting pseudoknot from Beet Western Yellows virus: the role of non-Watson-Crick base-pairing, ordered hydration, cation binding and base mutations on stability and unfolding J. Mol. Biol. 313 2001 1073 1091
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 1073-1091
-
-
Csaszar, K.1
Špačková, N.2
Štefl, R.3
Šponer, J.4
Leontis, N.B.5
-
26
-
-
1942519803
-
β-Hairpin folding mechanism of a nine-residue peptide revealed from molecular dynamics simulations in explicit water
-
X. Wu, and B.R. Brooks β-Hairpin folding mechanism of a nine-residue peptide revealed from molecular dynamics simulations in explicit water Biophys. J. 86 2004 1946 1958
-
(2004)
Biophys. J.
, vol.86
, pp. 1946-1958
-
-
Wu, X.1
Brooks, B.R.2
-
27
-
-
0033198021
-
A molecular dynamics simulations of the flavin mononucleotide-RNA aptamer complex
-
C. Schneider, and J. Sühnel A molecular dynamics simulations of the flavin mononucleotide-RNA aptamer complex Biopolymers 50 1999 287 302
-
(1999)
Biopolymers
, vol.50
, pp. 287-302
-
-
Schneider, C.1
Sühnel, J.2
-
29
-
-
0002592235
-
Molecular dynamics: Simulations of nucleic acids
-
R.v.R. Schleyer Wiley and Sons, Inc. Chichester, UK
-
P. Auffinger, and E. Westhof Molecular dynamics: simulations of nucleic acids R.v.R. Schleyer Encyclopedia of Computational Chemistry vol. 5 1998 Wiley and Sons, Inc. Chichester, UK 1629 1640
-
(1998)
Encyclopedia of Computational Chemistry
, vol.5
, pp. 1629-1640
-
-
Auffinger, P.1
Westhof, E.2
-
30
-
-
0032054952
-
Simulations of molecular dynamics of nucleic acids
-
P. Auffinger, and E. Westhof Simulations of molecular dynamics of nucleic acids Curr. Opin. Struct. Biol. 8 1998 227 236
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 227-236
-
-
Auffinger, P.1
Westhof, E.2
-
31
-
-
0032907143
-
Molecular dynamics simulations of solvated yeast tRNAAsp
-
P. Auffinger, and E. Westhof Molecular dynamics simulations of solvated yeast tRNAAsp Biophys. J. 76 1999 50 64
-
(1999)
Biophys. J.
, vol.76
, pp. 50-64
-
-
Auffinger, P.1
Westhof, E.2
-
32
-
-
0034598919
-
Secondary structure of vertebrate telomerase RNA
-
J.-L. Chen, M.A. Blasco, and C.W. Greider Secondary structure of vertebrate telomerase RNA Cell 100 2000 503 514
-
(2000)
Cell
, vol.100
, pp. 503-514
-
-
Chen, J.-L.1
Blasco, M.A.2
Greider, C.W.3
-
33
-
-
0003458038
-
Principles of nucleic acid structure
-
C.R. Cantor Springer-Verlag New York, USA
-
W. Saenger Principles of nucleic acid structure C.R. Cantor Springer Advanced Texts in Chemistry 1984 Springer-Verlag New York, USA
-
(1984)
Springer Advanced Texts in Chemistry
-
-
Saenger, W.1
-
36
-
-
0026000848
-
Crystal structure of an RNA double helix incorporating a track of non-Watson-Crick base-pairs
-
S.R. Holbrook, C. Cheong, I. Tinoco Jr, and S.-H. Kim Crystal structure of an RNA double helix incorporating a track of non-Watson-Crick base-pairs Nature 353 1991 579 581
-
(1991)
Nature
, vol.353
, pp. 579-581
-
-
Holbrook, S.R.1
Cheong, C.2
Tinoco Jr., I.3
Kim, S.-H.4
-
37
-
-
0001398008
-
How well does a restrained electrostatic potential (resp) model perform in calculating conformational energies of organic and biological molecules
-
J.M. Wang, P. Cieplak, and P.A. Kollman How well does a restrained electrostatic potential (resp) model perform in calculating conformational energies of organic and biological molecules J. Comput. Chem. 21 2000 1049 1074
-
(2000)
J. Comput. Chem.
, vol.21
, pp. 1049-1074
-
-
Wang, J.M.1
Cieplak, P.2
Kollman, P.A.3
-
38
-
-
0004195760
-
-
University of California San Francisco
-
D.A. Case, D.A. Pearlman, J.W. Caldwell, T.E. Cheatham III, J. Wang, and W.S. Ross AMBER 7 2002 University of California San Francisco
-
(2002)
AMBER 7
-
-
Case, D.A.1
Pearlman, D.A.2
Caldwell, J.W.3
Cheatham III, T.E.4
Wang, J.5
Ross, W.S.6
-
40
-
-
0346971105
-
Performance comparison of Generalized Born and Poisson methods in the calculation of electrostatic solvation energies for protein structures
-
M. Feig, A. Onufriev, M.S. Lee, W. Im, D.A. Case, and C.L. Brooks III Performance comparison of Generalized Born and Poisson methods in the calculation of electrostatic solvation energies for protein structures J. Comput. Chem. 25 2004 265 284
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 265-284
-
-
Feig, M.1
Onufriev, A.2
Lee, M.S.3
Im, W.4
Case, D.A.5
Brooks III, C.L.6
-
41
-
-
20644436466
-
Solvent models for protein-ligand binding: Comparison of implicit solvent Poisson and surface Generalized Born models with explicit solvent simulations
-
L.Y. Zhang, E. Gallicchio, R.A. Friesner, and R.M. Levy Solvent models for protein-ligand binding: comparison of implicit solvent Poisson and surface Generalized Born models with explicit solvent simulations J. Comput. Chem. 22 2001 591 607
-
(2001)
J. Comput. Chem.
, vol.22
, pp. 591-607
-
-
Zhang, L.Y.1
Gallicchio, E.2
Friesner, R.A.3
Levy, R.M.4
-
42
-
-
0033654297
-
Generalized Born models of macromolecular solvation effects
-
D. Bashford, and D.A. Case Generalized Born models of macromolecular solvation effects Annu. Rev. Phys. Chem. 51 2000 129 152
-
(2000)
Annu. Rev. Phys. Chem.
, vol.51
, pp. 129-152
-
-
Bashford, D.1
Case, D.A.2
-
43
-
-
14244273182
-
Theory and applications of the Generalized Born solvation model in macromolecular simulations
-
V. Tsui, and D.A. Case Theory and applications of the Generalized Born solvation model in macromolecular simulations Biopolymers 56 2001 275 291
-
(2001)
Biopolymers
, vol.56
, pp. 275-291
-
-
Tsui, V.1
Case, D.A.2
-
44
-
-
0000408363
-
Approximate atomic surfaces from linear combinations of pairwise overlaps (LCPO)
-
J. Weiser, P.S. Shenkin, and W.C. Still Approximate atomic surfaces from linear combinations of pairwise overlaps (LCPO) J. Comput. Chem. 20 1999 217 230
-
(1999)
J. Comput. Chem.
, vol.20
, pp. 217-230
-
-
Weiser, J.1
Shenkin, P.S.2
Still, W.C.3
-
45
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
H.J.C. Berendsen, J.P.M. Postma, W.F. van Gunsteren, A. DiNola, and J.R. Haak Molecular dynamics with coupling to an external bath J. Chem. Phys. 81 1984 3684 3690
-
(1984)
J. Chem. Phys.
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Van Gunsteren, W.F.3
Dinola, A.4
Haak, J.R.5
-
46
-
-
33645961739
-
A smooth particle mesh Ewald method
-
U. Essmann, L. Perera, M.L. Berkowitz, T.A. Darden, H. Lee, and L.G. Pedersen A smooth particle mesh Ewald method J. Chem. Phys. 103 1995 8577 8593
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 8577-8593
-
-
Essmann, U.1
Perera, L.2
Berkowitz, M.L.3
Darden, T.A.4
Lee, H.5
Pedersen, L.G.6
|