-
1
-
-
0037425585
-
Hox gene loss during dynamic evolution of the nematode cluster
-
Aboobaker AA. 2003. Hox gene loss during dynamic evolution of the nematode cluster. Curr Biol 13:37-40.
-
(2003)
Curr Biol
, vol.13
, pp. 37-40
-
-
Aboobaker, A.A.1
-
2
-
-
0024592814
-
Hox and HOM: Homologous gene clusters in insects and vertebrates
-
Akam M. 1989. Hox and HOM: homologous gene clusters in insects and vertebrates. Cell 57:347-349.
-
(1989)
Cell
, vol.57
, pp. 347-349
-
-
Akam, M.1
-
3
-
-
0032573579
-
Zebrafish Hox clusters and vertebrate genome evolution
-
Amores A, Force A, Yan YL, Joly L, Amemiya C, Fritz A, Ho RK, Langeland J, Prince V, Wang YL, Westerfield M, Ekker M, Postlethwait JH. 1998. Zebrafish Hox clusters and vertebrate genome evolution. Science 282:1711-1714.
-
(1998)
Science
, vol.282
, pp. 1711-1714
-
-
Amores, A.1
Force, A.2
Yan, Y.L.3
Joly, L.4
Amemiya, C.5
Fritz, A.6
Ho, R.K.7
Langeland, J.8
Prince, V.9
Wang, Y.L.10
Westerfield, M.11
Ekker, M.12
Postlethwait, J.H.13
-
4
-
-
0347135956
-
Developmental roles of pufferfish Hox clusters and genome evolution in ray-fin fish
-
Amores A, Suzuki T, Yan Y-L, Pomeroy J, Singer A, Amemiya C, Postlethwait J. 2004. Developmental roles of pufferfish Hox clusters and genome evolution in ray-fin fish. Genome Res 14:1-10.
-
(2004)
Genome Res
, vol.14
, pp. 1-10
-
-
Amores, A.1
Suzuki, T.2
Yan, Y.-L.3
Pomeroy, J.4
Singer, A.5
Amemiya, C.6
Postlethwait, J.7
-
5
-
-
0041941514
-
The small RNA profile during Drosophila melanogaster development
-
Aravin AA, Lagos-Quintana M, Yalcin A, Zavolan M, Marks D, Snyder B, Gaasterland T, Meyer J, Tuschl T. 2003. The small RNA profile during Drosophila melanogaster development. Dev Cell 5:337-350, 2003.
-
(2003)
Dev Cell
, vol.5
, pp. 337-350
-
-
Aravin, A.A.1
Lagos-Quintana, M.2
Yalcin, A.3
Zavolan, M.4
Marks, D.5
Snyder, B.6
Gaasterland, T.7
Meyer, J.8
Tuschl, T.9
-
6
-
-
0030854106
-
Phylogenetic reconstruction of vertebrate Hox cluster duplications
-
Bailey WJ, Kim J, Wagner G, Ruddle FH. 1997. Phylogenetic reconstruction of vertebrate Hox cluster duplications. Mol Biol Evol 14:843-853.
-
(1997)
Mol Biol Evol
, vol.14
, pp. 843-853
-
-
Bailey, W.J.1
Kim, J.2
Wagner, G.3
Ruddle, F.H.4
-
7
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism, and function
-
Bartel DP. 2004. MicroRNAs: Genomics, biogenesis, mechanism, and function. Cell 116:281-297.
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
8
-
-
0025330826
-
Synthesis and processing of small B2 transcripts in mouse embryonal carcinoma cells
-
Bladon TS, Fregeau CH, McBurney MW. 1990. Synthesis and processing of small B2 transcripts in mouse embryonal carcinoma cells. Mol Cell Biol 10:4058-4067.
-
(1990)
Mol Cell Biol
, vol.10
, pp. 4058-4067
-
-
Bladon, T.S.1
Fregeau, C.H.2
McBurney, M.W.3
-
9
-
-
0036199350
-
Sequence of the Tribolium castaneum homeotic complex: The region corresponding to the Drosophila melanogaster antennapedia complex
-
Brown SJ, Fellers JP, Shippy EA, Richardson TD, Maxwell M, Stuart JJ, Denell RE. 2002. Sequence of the Tribolium castaneum homeotic complex: The region corresponding to the Drosophila melanogaster antennapedia complex. Genetics 160:1067-1074.
-
(2002)
Genetics
, vol.160
, pp. 1067-1074
-
-
Brown, S.J.1
Fellers, J.P.2
Shippy, E.A.3
Richardson, T.D.4
Maxwell, M.5
Stuart, J.J.6
Denell, R.E.7
-
10
-
-
0027182311
-
The Caenorhabditis elegans homeobox gene cluster
-
Burglin TR, Ruvkun G. 1993. The Caenorhabditis elegans homeobox gene cluster. Curr Opin Genet Dev 3:615-620.
-
(1993)
Curr Opin Genet Dev
, vol.3
, pp. 615-620
-
-
Burglin, T.R.1
Ruvkun, G.2
-
11
-
-
0032509302
-
Genome sequence of the nematode C. elegans: A platform for investigating biology
-
elegans Sequencing Consortium. 1998. Genome sequence of the nematode C. elegans: A platform for investigating biology. Science 282:2012-2018.
-
(1998)
Science
, vol.282
, pp. 2012-2018
-
-
-
12
-
-
2442695407
-
Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription
-
Chambeyron S, Bickmore WA. 2004. Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription. Genes Dev 18:1119-1130.
-
(2004)
Genes Dev
, vol.18
, pp. 1119-1130
-
-
Chambeyron, S.1
Bickmore, W.A.2
-
13
-
-
9144273767
-
Bichir HoxA cluster sequence reveals surprising trends in rayfinned fish genomic evolution
-
Chiu C-H, Dewar K, Wagner GP, Takahashi K, Ruddle F, Ledje C, Bartsch P, Scemama J-L, Stellwag E, Fried F, Prohaska SJ, Stadler PF, Amemiya CT. 2004. Bichir HoxA cluster sequence reveals surprising trends in rayfinned fish genomic evolution. Genome Res 14:11-17.
-
(2004)
Genome Res
, vol.14
, pp. 11-17
-
-
Chiu, C.-H.1
Dewar, K.2
Wagner, G.P.3
Takahashi, K.4
Ruddle, F.5
Ledje, C.6
Bartsch, P.7
Scemama, J.-L.8
Stellwag, E.9
Fried, F.10
Prohaska, S.J.11
Stadler, P.F.12
Amemiya, C.T.13
-
14
-
-
0025367658
-
Characterization of two RNAs transcribed from the cis-regulatory region of the abd-A domain within the Drosophila bithorax complex
-
Cumberledge S, Zaratzian A, Sakonju S. 1990. Characterization of two RNAs transcribed from the cis-regulatory region of the abd-A domain within the Drosophila bithorax complex. Proc Natl Acad Sci USA 87:3259-3263.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 3259-3263
-
-
Cumberledge, S.1
Zaratzian, A.2
Sakonju, S.3
-
15
-
-
1542474715
-
Genome resource for the indonesian coelacanth, Latimeria menadoensis
-
Danke J, Miyake T, Powers T, Schein J, Shin H, Bosdet I, Erdmann M, Caldwell R, Amemiya CT. 2004. Genome resource for the indonesian coelacanth, Latimeria menadoensis. J Exp Zool A: Comp Exp Biol 301A:228-234.
-
(2004)
J Exp Zool A: Comp Exp Biol
, vol.301 A
, pp. 228-234
-
-
Danke, J.1
Miyake, T.2
Powers, T.3
Schein, J.4
Shin, H.5
Bosdet, I.6
Erdmann, M.7
Caldwell, R.8
Amemiya, C.T.9
-
16
-
-
2242464840
-
The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins
-
Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM, Harafuji N, Hastings KE, Ho I, Hotta K, Huang W, Kawashima T, Lemaire P, Martinez D, Meinertzhagen IA, Necula S, Nonaka M, Putnam N, Rash S, Saiga H, Satake M, Terry A, Yamada L, Wang HG, Awazu S, Azumi K, Boore J, Branno M, Chin-Bow S, DeSantis R, Doyle S, Francino P, Keys DN, Haga S, Hayashi H, Hino K, Imai KS, Inaba K, Kano S, Kobayashi K, Kobayashi M, Lee BI, Makabe KW, Manohar C, Matassi G, Medina M, Mochizuki Y, Mount S, Morishita T, Miura S, Nakayama A, Nishizaka S, Nomoto H, Ohta F, Oishi K, Rigoutsos I, Sano M, Sasaki A, Sasakura Y, Shoguchi E, Shin-i T, Spagnuolo A, Stainier D, Suzuki MM, Tassy O, Takatori N, Tokuoka M, Yagi K, Yoshizaki F, Wada S, Zhang C, Hyatt PD, Larimer F, Detter C, Doggett N, Glavina T, Hawkins T, Richardson P, Lucas S, Kohara Y, Levine M, Satoh N, Rokhsar DS. 2002. The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins. Science 298:2157-2167.
-
(2002)
Science
, vol.298
, pp. 2157-2167
-
-
Dehal, P.1
Satou, Y.2
Campbell, R.K.3
Chapman, J.4
Degnan, B.5
De Tomaso, A.6
Davidson, B.7
Di Gregorio, A.8
Gelpke, M.9
Goodstein, D.M.10
Harafuji, N.11
Hastings, K.E.12
Ho, I.13
Hotta, K.14
Huang, W.15
Kawashima, T.16
Lemaire, P.17
Martinez, D.18
Meinertzhagen, I.A.19
Necula, S.20
Nonaka, M.21
Putnam, N.22
Rash, S.23
Saiga, H.24
Satake, M.25
Terry, A.26
Yamada, L.27
Wang, H.G.28
Awazu, S.29
Azumi, K.30
Boore, J.31
Branno, M.32
Chin-Bow, S.33
DeSantis, R.34
Doyle, S.35
Francino, P.36
Keys, D.N.37
Haga, S.38
Hayashi, H.39
Hino, K.40
Imai, K.S.41
Inaba, K.42
Kano, S.43
Kobayashi, K.44
Kobayashi, M.45
Lee, B.I.46
Makabe, K.W.47
Manohar, C.48
Matassi, G.49
Medina, M.50
Mochizuki, Y.51
Mount, S.52
Morishita, T.53
Miura, S.54
Nakayama, A.55
Nishizaka, S.56
Nomoto, H.57
Ohta, F.58
Oishi, K.59
Rigoutsos, I.60
Sano, M.61
Sasaki, A.62
Sasakura, Y.63
Shoguchi, E.64
Shin-i, T.65
Spagnuolo, A.66
Stainier, D.67
Suzuki, M.M.68
Tassy, O.69
Takatori, N.70
Tokuoka, M.71
Yagi, K.72
Yoshizaki, F.73
Wada, S.74
Zhang, C.75
Hyatt, P.D.76
Larimer, F.77
Detter, C.78
Doggett, N.79
Glavina, T.80
Hawkins, T.81
Richardson, P.82
Lucas, S.83
Kohara, Y.84
Levine, M.85
Satoh, N.86
Rokhsar, D.S.87
more..
-
17
-
-
0033668351
-
Characterization of the Hox gene cluster in the malaria vector mosquito, Anopheles gambiae
-
Devenport MP, Blass C, Eggleston P. 2000. Characterization of the Hox gene cluster in the malaria vector mosquito, Anopheles gambiae. Evol Dev 2:326-339.
-
(2000)
Evol Dev
, vol.2
, pp. 326-339
-
-
Devenport, M.P.1
Blass, C.2
Eggleston, P.3
-
18
-
-
3242791849
-
The Drosophila melanogaster genome sequencing and annotation projects: A status report
-
Drysdale R. 2003. The Drosophila melanogaster genome sequencing and annotation projects: a status report. Brief Funct Genomic Proteomic 2:128-134.
-
(2003)
Brief Funct Genomic Proteomic
, vol.2
, pp. 128-134
-
-
Drysdale, R.1
-
19
-
-
0024341769
-
The structural and functional organization of the murine hox gene family resembles that of drosophila homeotic genes
-
Duboule D, Dollé P. 1989. The structural and functional organization of the murine hox gene family resembles that of drosophila homeotic genes. EMBO J 8:1497-1505.
-
(1989)
EMBO J
, vol.8
, pp. 1497-1505
-
-
Duboule, D.1
Dollé, P.2
-
20
-
-
0000122573
-
Phylip - Phylogeny inference package (version 3.2)
-
Felsenstein J. 1989. Phylip - phylogeny inference package (version 3.2). Cladistics 5:164-166.
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
21
-
-
0037092011
-
Hox cluster organization in the jawless vertebrate Petromyzon marinus
-
Force A, Amores A, Postlethwait JH. 2002. Hox cluster organization in the jawless vertebrate Petromyzon marinus. J Exp Zool (Mol Dev Evol) 294:30-46.
-
(2002)
J Exp Zool (Mol Dev Evol)
, vol.294
, pp. 30-46
-
-
Force, A.1
Amores, A.2
Postlethwait, J.H.3
-
23
-
-
1842852702
-
Exclusion of repetitive DNA elements from gnathostome Hox clusters
-
Fried C, Prohaska SJ, Stadler PF. 2004. Exclusion of repetitive DNA elements from gnathostome Hox clusters. J Exp Zool (Mol Dev Evol) 302B:165-173.
-
(2004)
J Exp Zool (Mol Dev Evol)
, vol.302 B
, pp. 165-173
-
-
Fried, C.1
Prohaska, S.J.2
Stadler, P.F.3
-
24
-
-
0032536845
-
Analysis of the murine Hoxa-9 cDNA: An alternatively spliced transcript encodes a truncated protein lacking the homeodomain
-
Fujimoto S, Araki K, Chisaka O, Araki M, Takagi K, Yamamura K-I. 1998. Analysis of the murine Hoxa-9 cDNA: an alternatively spliced transcript encodes a truncated protein lacking the homeodomain. Gene 16:77-85.
-
(1998)
Gene
, vol.16
, pp. 77-85
-
-
Fujimoto, S.1
Araki, K.2
Chisaka, O.3
Araki, M.4
Takagi, K.5
Yamamura, K.-I.6
-
25
-
-
0028065237
-
Archetypal organization of the amphioxus hox gene cluster
-
Garcia-Fernández J, Holland PW. 1994. Archetypal organization of the amphioxus hox gene cluster. Nature 370:563-566.
-
(1994)
Nature
, vol.370
, pp. 563-566
-
-
Garcia-Fernández, J.1
Holland, P.W.2
-
26
-
-
1842684068
-
Rat Genome Sequencing Project Consortium. Genome sequence of the brown norway rat yields insights into mammalian evolution
-
Gibbs RA et al. 2004. Rat Genome Sequencing Project Consortium. Genome sequence of the brown norway rat yields insights into mammalian evolution. Nature 428:493-521.
-
(2004)
Nature
, vol.428
, pp. 493-521
-
-
Gibbs, R.A.1
-
28
-
-
0347756679
-
The draft genome sequence of the nematode Caenorhabditis briggsae, a companion to C. elegans
-
Gupta BP, Sternberg PW. 2003. The draft genome sequence of the nematode Caenorhabditis briggsae, a companion to C. elegans. Genome Biol 4:238.
-
(2003)
Genome Biol
, vol.4
, pp. 238
-
-
Gupta, B.P.1
Sternberg, P.W.2
-
29
-
-
1842636256
-
Comparative genomic analysis of vertebrate Hox3 and Hox4 genes
-
Hadrys T, Prince V, Hunter M, Baker R, Rinkwitz S. 2004. Comparative genomic analysis of vertebrate Hox3 and Hox4 genes. J Exp Zool (Mol Dev Evol) 302B:147-164.
-
(2004)
J Exp Zool (Mol Dev Evol)
, vol.302 B
, pp. 147-164
-
-
Hadrys, T.1
Prince, V.2
Hunter, M.3
Baker, R.4
Rinkwitz, S.5
-
30
-
-
0043123153
-
The Vienna RNA secondary structure server
-
Hofacker IL. 2003. The Vienna RNA secondary structure server. Nucl Acids Res 31:3429-3431.
-
(2003)
Nucl Acids Res
, vol.31
, pp. 3429-3431
-
-
Hofacker, I.L.1
-
31
-
-
34249772381
-
Fast folding and comparison of RNA secondary structures
-
Hofacker IL, Fontana W, Stadler PF, Bonhoeffer S, Tacker M, Schuster P. 1994. Fast folding and comparison of RNA secondary structures. Mh Chem 125:167-188.
-
(1994)
Mh Chem
, vol.125
, pp. 167-188
-
-
Hofacker, I.L.1
Fontana, W.2
Stadler, P.F.3
Bonhoeffer, S.4
Tacker, M.5
Schuster, P.6
-
32
-
-
0036301332
-
Secondary structure prediction for aligned RNA sequences
-
Hofacker IL, Fekete M, Stadler PF. 2002. Secondary structure prediction for aligned RNA sequences. J Mol Biol 319:1059-1066.
-
(2002)
J Mol Biol
, vol.319
, pp. 1059-1066
-
-
Hofacker, I.L.1
Fekete, M.2
Stadler, P.F.3
-
35
-
-
0029069318
-
Hoxall structure, extensive antisense transcription, and function in male and female fertility
-
Hsieh-Li HM, Witte DP, Weinstein M, Branford W, Li H, Small K, Potter SS. 1995. Hoxall structure, extensive antisense transcription, and function in male and female fertility. Development 121:1373-1385.
-
(1995)
Development
, vol.121
, pp. 1373-1385
-
-
Hsieh-Li, H.M.1
Witte, D.P.2
Weinstein, M.3
Branford, W.4
Li, H.5
Small, K.6
Potter, S.S.7
-
36
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
Human Genome International Sequencing Consortium. 2001. Initial sequencing and analysis of the human genome. Nature 409:860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
-
37
-
-
0037091997
-
Genomic analysis of Hox clusters in the sea lamprey, Petromyzon marinus
-
Irvine SQ, Carr JL, Bailey WJ, Kawasaki K, Shimizu N, Amemiya CT, Ruddle FH. Genomic analysis of Hox clusters in the sea lamprey, Petromyzon marinus. J Exp Zool (Mol Dev Evol) 294:47-62.
-
J Exp Zool (Mol Dev Evol)
, vol.294
, pp. 47-62
-
-
Irvine, S.Q.1
Carr, J.L.2
Bailey, W.J.3
Kawasaki, K.4
Shimizu, N.5
Amemiya, C.T.6
Ruddle, F.H.7
-
39
-
-
12944301125
-
Hox cluster genomics in the horn shark, heterodontus francisci
-
Kim CB, Amemiya C, Bailey W, Kawasaki K, Mezey J, Miller W, Minosima S, Shimizu N, Wagner GP, Ruddle F. 2000. Hox cluster genomics in the horn shark, heterodontus francisci. Proc Natl Acad Sci USA 97:1655-1660.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 1655-1660
-
-
Kim, C.B.1
Amemiya, C.2
Bailey, W.3
Kawasaki, K.4
Mezey, J.5
Miller, W.6
Minosima, S.7
Shimizu, N.8
Wagner, G.P.9
Ruddle, F.10
-
40
-
-
0346458628
-
Identification of many microRNAs that copurify with polyribosomes in mammalian neurons
-
Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G. 2004. Identification of many microRNAs that copurify with polyribosomes in mammalian neurons. Proc Natl Acad Sci USA 101:360-365.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 360-365
-
-
Kim, J.1
Krichevsky, A.2
Grad, Y.3
Hayes, G.D.4
Kosik, K.S.5
Church, G.M.6
Ruvkun, G.7
-
41
-
-
0031800259
-
Genomic structure and sequence analysis of human HoxA-9
-
Kim MH, Chang HH, Shin C, Cho M, Park D, Park HW. 1998. Genomic structure and sequence analysis of human HoxA-9. DNA Cell Biol 17:407-414.
-
(1998)
DNA Cell Biol
, vol.17
, pp. 407-414
-
-
Kim, M.H.1
Chang, H.H.2
Shin, C.3
Cho, M.4
Park, D.5
Park, H.W.6
-
42
-
-
0034650804
-
Mechanisms of hox gene colinearity: Transposition of the anterior Hoxb1 gene into the posterior HoxD complex
-
Kmita M, van Der Hoeven F, Zákány J, Krumlauf R, Duboule D. 2000. Mechanisms of hox gene colinearity: transposition of the anterior Hoxb1 gene into the posterior HoxD complex. Genes Dev 14:198-211.
-
(2000)
Genes Dev
, vol.14
, pp. 198-211
-
-
Kmita, M.1
Van Der Hoeven, F.2
Zákány, J.3
Krumlauf, R.4
Duboule, D.5
-
43
-
-
0035955374
-
Identification of novel genes coding for small expressed RNAs
-
Lagos-Quintana M, Rauhut R, Lendeckel W, Tuschl T. 2001. Identification of novel genes coding for small expressed RNAs. Science 294:853-858.
-
(2001)
Science
, vol.294
, pp. 853-858
-
-
Lagos-Quintana, M.1
Rauhut, R.2
Lendeckel, W.3
Tuschl, T.4
-
44
-
-
0037321349
-
New microRNAs from mouse and human
-
Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T. 2003. New microRNAs from mouse and human. RNA 9:175-179.
-
(2003)
RNA
, vol.9
, pp. 175-179
-
-
Lagos-Quintana, M.1
Rauhut, R.2
Meyer, J.3
Borkhardt, A.4
Tuschl, T.5
-
45
-
-
0344232733
-
microRNAs: Runts of the genome assert themselves
-
Lai EC. 2003. microRNAs: Runts of the genome assert themselves. Curr Biol 13:R925-936.
-
(2003)
Curr Biol
, vol.13
-
-
Lai, E.C.1
-
46
-
-
0346094457
-
Prediction of mammalian microRNA targets
-
Lewis BP, Shih I-h, Jones-Rhoades MW, Bartel DP, Burge CB. 2003. Prediction of mammalian microRNA targets. Cell 115:787-798.
-
(2003)
Cell
, vol.115
, pp. 787-798
-
-
Lewis, B.P.1
Shih, I.-H.2
Jones-Rhoades, M.W.3
Bartel, D.P.4
Burge, C.B.5
-
48
-
-
0026504525
-
Homeobox genes and axial patterning
-
McGinnis W, Krumlauf R. 1992. Homeobox genes and axial patterning. Cell 68:283-302.
-
(1992)
Cell
, vol.68
, pp. 283-302
-
-
McGinnis, W.1
Krumlauf, R.2
-
49
-
-
5144229657
-
The genome sequence of silkworm, Bombyx mori
-
Mita K, Kasahara M, Sasaki S, Nagayasu Y, Yamada T, Kanamori H, Namiki N, Kitagawa M, Yamashita H, Yasukochi Y, Kadono-Okuda K, Yamamoto K, Ajimura M, Ravikumar G, Shimomura M, Nagamura Y, Shin-I T, Abe H, Shimada T, Morishita S, Sasaki T. 2004. The genome sequence of silkworm, Bombyx mori. DNA Res 29:27-35, 2004.
-
(2004)
DNA Res
, vol.29
, pp. 27-35
-
-
Mita, K.1
Kasahara, M.2
Sasaki, S.3
Nagayasu, Y.4
Yamada, T.5
Kanamori, H.6
Namiki, N.7
Kitagawa, M.8
Yamashita, H.9
Yasukochi, Y.10
Kadono-Okuda, K.11
Yamamoto, K.12
Ajimura, M.13
Ravikumar, G.14
Shimomura, M.15
Nagamura, Y.16
Shin-I, T.17
Abe, H.18
Shimada, T.19
Morishita, S.20
Sasaki, T.21
more..
-
50
-
-
0037783427
-
Conservation of the heterochronic regulator Lin-28, its developmental expression and microRNA complementary sites
-
Moss E, Tang L. 2003. Conservation of the heterochronic regulator Lin-28, its developmental expression and microRNA complementary sites. Dev Biol 15:432-442.
-
(2003)
Dev Biol
, vol.15
, pp. 432-442
-
-
Moss, E.1
Tang, L.2
-
51
-
-
0642285627
-
The microRNA world: Small is mighty
-
Nelson P, Kiriakidou M, Sharma A, Maniataki E, Mourelatos Z. 2003. The microRNA world: small is mighty. Trends Biochem Sci 28:534-540.
-
(2003)
Trends Biochem Sci
, vol.28
, pp. 534-540
-
-
Nelson, P.1
Kiriakidou, M.2
Sharma, A.3
Maniataki, E.4
Mourelatos, Z.5
-
52
-
-
0034597777
-
Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA
-
Pasquinelli AE, Reinhart BJ, Slack F, Martindale MQ, Kurodak MI, Maller B, Hayward DC, Ball EE, Degnan B, Müller P, Spring A, Jürg Srinivasan, Fishman M, Finnerty J, Corbo J, Levine M, Leahy P, Davidson E, Ruvkun G. 2000. Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA. Nature 408:86-89.
-
(2000)
Nature
, vol.408
, pp. 86-89
-
-
Pasquinelli, A.E.1
Reinhart, B.J.2
Slack, F.3
Martindale, M.Q.4
Kurodak, M.I.5
Maller, B.6
Hayward, D.C.7
Ball, E.E.8
Degnan, B.9
Müller, P.10
Spring, A.11
Srinivasan, J.12
Fishman, M.13
Finnerty, J.14
Corbo, J.15
Levine, M.16
Leahy, P.17
Davidson, E.18
Ruvkun, G.19
-
53
-
-
0042814908
-
Expression of the 22 nucleotide let-7 heterochronic RNA throughout the metazoa: A role in life history evolution?
-
Pasquinelli AE, McCoy A, Jiménez E, Emili S, Ruvkun G, Martindale MQ, Bagun̄à J. 2003. Expression of the 22 nucleotide let-7 heterochronic RNA throughout the metazoa: a role in life history evolution? Evol Dev 5:372-378.
-
(2003)
Evol Dev
, vol.5
, pp. 372-378
-
-
Pasquinelli, A.E.1
McCoy, A.2
Jiménez, E.3
Emili, S.4
Ruvkun, G.5
Martindale, M.Q.6
Bagunà, J.7
-
54
-
-
0033556313
-
Endothelial cells express a novel, tumor necrosis factor-α- regulated variant of HoxA9
-
Patel CV, Bandyopadhyay S, DiCorleto PE. 1999. Endothelial cells express a novel, tumor necrosis factor-α-regulated variant of HoxA9. J Biol Chem 274:1415-1422.
-
(1999)
J Biol Chem
, vol.274
, pp. 1415-1422
-
-
Patel, C.V.1
Bandyopadhyay, S.2
Dicorleto, P.E.3
-
56
-
-
0033668350
-
Characterization of the hox cluster from the mosquito Anopheles gambiae (Diptera: Culicidae)
-
Powers TP, Hogan J, Ke Z, Dymbrowski K, Wang X, Collins FH, Kaufman TC. 2000. Characterization of the hox cluster from the mosquito Anopheles gambiae (Diptera: Culicidae). Evol Dev 2:311-325.
-
(2000)
Evol Dev
, vol.2
, pp. 311-325
-
-
Powers, T.P.1
Hogan, J.2
Ke, Z.3
Dymbrowski, K.4
Wang, X.5
Collins, F.H.6
Kaufman, T.C.7
-
57
-
-
3142552575
-
The duplication of the hox gene clusters in teleost fishes
-
Prohaska SJ, Stadler PF. 2004. The duplication of the hox gene clusters in teleost fishes. Th Biosci 123:89-110.
-
(2004)
Th Biosci
, vol.123
, pp. 89-110
-
-
Prohaska, S.J.1
Stadler, P.F.2
-
58
-
-
0842334025
-
The shark HoxN cluster is homologous to the human HoxD cluster
-
Prohaska SJ, Fried C, Amemiya CT, Ruddle FH, Wagner GP, Stadler PF. 2004a. The shark HoxN cluster is homologous to the human HoxD cluster. J Mol Evol 212-217.
-
(2004)
J Mol Evol
, pp. 212-217
-
-
Prohaska, S.J.1
Fried, C.2
Amemiya, C.T.3
Ruddle, F.H.4
Wagner, G.P.5
Stadler, P.F.6
-
59
-
-
1842679836
-
Surveying phylogenetic footprints in large gene clusters: Applications to Hox cluster duplications
-
Prohaska SJ, Fried C, Flamm C, Wagner G, Stadler PF. 2004b. Surveying phylogenetic footprints in large gene clusters: Applications to Hox cluster duplications. Mol Phyl Evol 31:581-604.
-
(2004)
Mol Phyl Evol
, vol.31
, pp. 581-604
-
-
Prohaska, S.J.1
Fried, C.2
Flamm, C.3
Wagner, G.4
Stadler, P.F.5
-
60
-
-
1542297345
-
Computational identification of microRNA targets
-
Rajewski N, Socci ND. 2004. Computational identification of microRNA targets. Devel Biol 267:529-535.
-
(2004)
Devel Biol
, vol.267
, pp. 529-535
-
-
Rajewski, N.1
Socci, N.D.2
-
61
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
62
-
-
0038817801
-
Evolutionary conservation of regulatory elements in vertebrate Hox gene clusters
-
Santini S, Boore JL, Meyer A. 2003. Evolutionary conservation of regulatory elements in vertebrate Hox gene clusters. Genome Res 13:1111-1122.
-
(2003)
Genome Res
, vol.13
, pp. 1111-1122
-
-
Santini, S.1
Boore, J.L.2
Meyer, A.3
-
63
-
-
0027395830
-
The antennapedia-type homeobox genes have evolved from three precursors separated early in metazoan evolution
-
Schubert FR, Nieselt-Struwe K, Gruss P. 1993. The antennapedia-type homeobox genes have evolved from three precursors separated early in metazoan evolution. Proc Natl Acad Sci USA 90:143-147.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 143-147
-
-
Schubert, F.R.1
Nieselt-Struwe, K.2
Gruss, P.3
-
64
-
-
0031890714
-
Short retrotransposons of the B2 superfamily: Evolution and applications for the study of rodent phylogeny
-
Serdobova IM, Kramerov DA. 1998. Short retrotransposons of the B2 superfamily: Evolution and applications for the study of rodent phylogeny. J Mol Evol 46:202-214.
-
(1998)
J Mol Evol
, vol.46
, pp. 202-214
-
-
Serdobova, I.M.1
Kramerov, D.A.2
-
65
-
-
0030473920
-
Gen(om)e duplications in the evolution of early vertebrates
-
Sidow A. 1996. Gen(om)e duplications in the evolution of early vertebrates. Curr Opin Genet Dev 6:715-722.
-
(1996)
Curr Opin Genet Dev
, vol.6
, pp. 715-722
-
-
Sidow, A.1
-
66
-
-
0033560950
-
Genomic organization of the Hoxa4 -Hoxa10 region from Morone saxatilis: Implications for Hox gene evolution among vertebrates
-
Snell EA, Scemama JL, Stellwag EJ. 1999. Genomic organization of the Hoxa4 -Hoxa10 region from Morone saxatilis: implications for Hox gene evolution among vertebrates. J Exp Zool (Mol Dev Evol) 285:41-49.
-
(1999)
J Exp Zool (Mol Dev Evol)
, vol.285
, pp. 41-49
-
-
Snell, E.A.1
Scemama, J.L.2
Stellwag, E.J.3
-
67
-
-
0037648873
-
Unusual number and genomic organization of Hox genes in the tunicate Ciona intestinalis
-
Spagnuolo A, Ristoratore F, Di Gregorio A, Aniello F, Branno M, Di Lauro R. 2003. Unusual number and genomic organization of Hox genes in the tunicate Ciona intestinalis. Gene 309:71-79.
-
(2003)
Gene
, vol.309
, pp. 71-79
-
-
Spagnuolo, A.1
Ristoratore, F.2
Di Gregorio, A.3
Aniello, F.4
Branno, M.5
Di Lauro, R.6
-
68
-
-
1842838629
-
Evidence for independent hox gene duplications in the hagfish lineage: A pcr-based gene inventory of eptatretus stoutii
-
Stadler P, Fried C, Prohaska S, Bailey W, Misof B, Ruddle F, Wagner G. 2004. Evidence for independent hox gene duplications in the hagfish lineage: a pcr-based gene inventory of eptatretus stoutii. Mol Phylogenet Evol 32:686-694.
-
(2004)
Mol Phylogenet Evol
, vol.32
, pp. 686-694
-
-
Stadler, P.1
Fried, C.2
Prohaska, S.3
Bailey, W.4
Misof, B.5
Ruddle, F.6
Wagner, G.7
-
69
-
-
0027453388
-
Simple methods for testing molecular clock hypothesis
-
Tajima F. 1993. Simple methods for testing molecular clock hypothesis. Genetics 135:599-607.
-
(1993)
Genetics
, vol.135
, pp. 599-607
-
-
Tajima, F.1
-
70
-
-
2342450524
-
Molecular evolution of a microRNA cluster
-
Tanzer A, Stadler PF. 2004. Molecular evolution of a microRNA cluster. J Mol Biol 339:327-335.
-
(2004)
J Mol Biol
, vol.339
, pp. 327-335
-
-
Tanzer, A.1
Stadler, P.F.2
-
71
-
-
0027968068
-
CLUSTALW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties, and weight matrix choice
-
Thompson JD, Higgs DG, Gibson TJ. 1994. CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties, and weight matrix choice. Nucl Acids Res 22:4673-4680.
-
(1994)
Nucl Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgs, D.G.2
Gibson, T.J.3
-
72
-
-
0344610640
-
Splits in fruitfly Hox gene complexes
-
von Allmen G, Hogga I, Spierer A, Karch F, Bender W, Gyurkovics H, Lewis E. 1996. Splits in fruitfly Hox gene complexes. Nature 380:116.
-
(1996)
Nature
, vol.380
, pp. 116
-
-
Von Allmen, G.1
Hogga, I.2
Spierer, A.3
Karch, F.4
Bender, W.5
Gyurkovics, H.6
Lewis, E.7
-
73
-
-
6344274712
-
Divergence of conserved non-coding sequences: Rate estimates and relative rate tests
-
Wagner GP, Fried C, Prohaska SJ, Stadler PF. 2004. Divergence of conserved non-coding sequences: Rate estimates and relative rate tests. Mol Biol Evol 21:2116-2121.
-
(2004)
Mol Biol Evol
, vol.21
, pp. 2116-2121
-
-
Wagner, G.P.1
Fried, C.2
Prohaska, S.J.3
Stadler, P.F.4
-
74
-
-
1542563409
-
Mouse Genome Sequencing Project Consortium. Initial sequencing and comparative analysis of the mouse genome
-
Waterston RH et al. 2002. Mouse Genome Sequencing Project Consortium. Initial sequencing and comparative analysis of the mouse genome. Nature 420:520-562.
-
(2002)
Nature
, vol.420
, pp. 520-562
-
-
Waterston, R.H.1
-
75
-
-
0020714456
-
Rapid similarity searches of nucleic acid and protein data banks
-
Wilbur WJ, Lipman DJ. 1983. Rapid similarity searches of nucleic acid and protein data banks. Proc Natl Acad Sci USA 80:726-730.
-
(1983)
Proc Natl Acad Sci USA
, vol.80
, pp. 726-730
-
-
Wilbur, W.J.1
Lipman, D.J.2
-
76
-
-
2142654329
-
MircoRNA-directed cleavage of HoxB8 mRNA
-
Yekta S, Shih I-h, Bartel DP. 2004. MircoRNA-directed cleavage of HoxB8 mRNA. Science 304:594-596.
-
(2004)
Science
, vol.304
, pp. 594-596
-
-
Yekta, S.1
Shih, I.-H.2
Bartel, D.P.3
|