메뉴 건너뛰기




Volumn 28, Issue 1, 2005, Pages 57-65

Prevalence of Burkholderia sp. nodule symbionts on four mimosoid legumes from Barro Colorado Island, Panama

Author keywords

23S rRNA; Leguminosae; Phylogenetic incongruence; Symbiosis; Proteobacteria

Indexed keywords

BACTERIAL ENZYME; RIBOSOME RNA;

EID: 12744280569     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.syapm.2004.09.002     Document Type: Article
Times cited : (80)

References (40)
  • 1
    • 0032955598 scopus 로고    scopus 로고
    • Burkholderia caribensis sp. Nov., an exopolysaccharide-producing bacterium isolated from vertisol microaggregates in Martinique
    • W. Achouak, R. Christen, M. Barakat, M.H. Martel, and T. Heulin Burkholderia caribensis sp. Nov., an exopolysaccharide-producing bacterium isolated from vertisol microaggregates in Martinique Int. J. Syst. Bacteriol. 49 1999 787 794
    • (1999) Int. J. Syst. Bacteriol. , vol.49 , pp. 787-794
    • Achouak, W.1    Christen, R.2    Barakat, M.3    Martel, M.H.4    Heulin, T.5
  • 2
    • 0037337426 scopus 로고    scopus 로고
    • Quorum-sensing system and stationary-phase sigma factor (rpoS) of the onion pathogen pathogen Burkholderia cepacia Genovar I type strain, ATCC 25416
    • C. Aguilar, I. Bertani, and V. Venturi Quorum-sensing system and stationary-phase sigma factor (rpoS) of the onion pathogen pathogen Burkholderia cepacia Genovar I type strain, ATCC 25416 Appl. Env. Microbiol. 69 2003 1739 1747
    • (2003) Appl. Env. Microbiol. , vol.69 , pp. 1739-1747
    • Aguilar, C.1    Bertani, I.2    Venturi, V.3
  • 3
    • 0034801924 scopus 로고    scopus 로고
    • Ralstonia taiwanensis sp. nov., isolated from root nodules of Mimosa species and sputum of a cystic fibrosis patient
    • W.M. Chen, S. Laevens, T.M. Lee, T. Coenye, P. De vos, M. Mergeay, and P. Vandamme Ralstonia taiwanensis sp. nov., isolated from root nodules of Mimosa species and sputum of a cystic fibrosis patient Int. J. Syst. Evol. Microbiol. 51 2001 1729 1735
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 1729-1735
    • Chen, W.M.1    Laevens, S.2    Lee, T.M.3    Coenye, T.4    De Vos, P.5    Mergeay, M.6    Vandamme, P.7
  • 5
    • 0034106192 scopus 로고    scopus 로고
    • Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp nov Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb nov
    • T. Coenye, E. Falsen, B. Hoste, M. Ohlen, J. Goris, J.R. Govan, M. Gillis, and P. Vandamme Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp nov Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb nov Int. J. Syst. Evol. Microbiol. 50 2000 887 899
    • (2000) Int. J. Syst. Evol. Microbiol. , vol.50 , pp. 887-899
    • Coenye, T.1    Falsen, E.2    Hoste, B.3    Ohlen, M.4    Goris, J.5    Govan, J.R.6    Gillis, M.7    Vandamme, P.8
  • 6
    • 0034993324 scopus 로고    scopus 로고
    • Burkholderia fungorum sp. nov., and Burkholderia caledonica sp. nov. two new species isolated from the environment, animals and human clinical samples
    • T. Coenye, S. Laevens, A. Willems, M. Ohlen, W. Hannant, J.R.W. Govan, M. Gillis, E. Falsen, and P. Vandamme Burkholderia fungorum sp. nov., and Burkholderia caledonica sp. nov. two new species isolated from the environment, animals and human clinical samples Int. J. Syst. Evol. Microbiol. 51 2001 1099 1107
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 1099-1107
    • Coenye, T.1    Laevens, S.2    Willems, A.3    Ohlen, M.4    Hannant, W.5    Govan, J.R.W.6    Gillis, M.7    Falsen, E.8    Vandamme, P.9
  • 9
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • J. Felsenstein Confidence limits on phylogenies an approach using the bootstrap Evolution 39 1985 783 791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 11
    • 0030752885 scopus 로고    scopus 로고
    • Transfer of Rhizobium loti, Rhizobium haukuii, Rhizobium ciceri, Rhizobium mediterraneum, Rhizobium tianshanense, to Mesorhizobium gen. nov
    • B. Jarvis, P. Van Berkum, W.X. Chen, S.M. Nour, M.P. Fernandez, J.C. Cleyet-Merel, and M. Gillis Transfer of Rhizobium loti, Rhizobium haukuii, Rhizobium ciceri, Rhizobium mediterraneum, Rhizobium tianshanense, to Mesorhizobium gen. nov Int. J. Syst. Bacteriol. 47 1997 895 898
    • (1997) Int. J. Syst. Bacteriol. , vol.47 , pp. 895-898
    • Jarvis, B.1    Van Berkum, P.2    Chen, W.X.3    Nour, S.M.4    Fernandez, M.P.5    Cleyet-Merel, J.C.6    Gillis, M.7
  • 12
    • 0003586408 scopus 로고    scopus 로고
    • Cambridge University Press Cambridge, UK
    • D.J. Mabberley The Plant Book 1997 Cambridge University Press Cambridge, UK
    • (1997) The Plant Book
    • Mabberley, D.J.1
  • 13
    • 0036322432 scopus 로고    scopus 로고
    • Culture-based and non-growth-dependent detection of the Burkholderia cepacia Complex in soil environments
    • S.C.M. Miller, J.J. Lipuma, and J.L. Parke Culture-based and non-growth-dependent detection of the Burkholderia cepacia Complex in soil environments Appl. Environ. Microbiol. 68 2002 3750 3758
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 3750-3758
    • Miller, S.C.M.1    Lipuma, J.J.2    Parke, J.L.3
  • 14
    • 0035927646 scopus 로고    scopus 로고
    • Nodulation of legumes by members of the beta-subclass of Proteobacteria
    • L. Moulin, A. Munive, B. Dreyfus, and C. Boivin-Masson Nodulation of legumes by members of the beta-subclass of Proteobacteria Nature 411 2001 948 950
    • (2001) Nature , vol.411 , pp. 948-950
    • Moulin, L.1    Munive, A.2    Dreyfus, B.3    Boivin-Masson, C.4
  • 15
    • 0034489933 scopus 로고    scopus 로고
    • Divergent Bradyrhizobium symbionts on Tachigali versicolor from Barro Colorado Island, Panama
    • M.A. Parker Divergent Bradyrhizobium symbionts on Tachigali versicolor from Barro Colorado Island, Panama Syst. Appl. Microbiol. 23 2000 585 590
    • (2000) Syst. Appl. Microbiol. , vol.23 , pp. 585-590
    • Parker, M.A.1
  • 16
    • 0035344698 scopus 로고    scopus 로고
    • Case of localized recombination in 23S rRNA genes from divergent Bradyrhizobium lineages associated with Neotropical legumes
    • M.A. Parker Case of localized recombination in 23S rRNA genes from divergent Bradyrhizobium lineages associated with Neotropical legumes Appl. Environ. Microbiol. 67 2001 2076 2082
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 2076-2082
    • Parker, M.A.1
  • 17
    • 0041874641 scopus 로고    scopus 로고
    • Genetic markers for analyzing symbiotic relationships and lateral gene transfer in Neotropical bradyrhizobia
    • M.A. Parker Genetic markers for analyzing symbiotic relationships and lateral gene transfer in Neotropical bradyrhizobia Mol. Ecol. 12 2003 2447 2455
    • (2003) Mol. Ecol. , vol.12 , pp. 2447-2455
    • Parker, M.A.1
  • 18
    • 0041857343 scopus 로고    scopus 로고
    • A widespread Neotropical Bradyrhizobium lineage associated with Machaerium and Desmodium (Papilionoideae)
    • M.A. Parker A widespread Neotropical Bradyrhizobium lineage associated with Machaerium and Desmodium (Papilionoideae) Plant Soil 254 2003 263 268
    • (2003) Plant Soil , vol.254 , pp. 263-268
    • Parker, M.A.1
  • 19
    • 2642587193 scopus 로고    scopus 로고
    • RRNA and dnaK relationships of Bradyrhizobium sp. nodule bacteria from four Papilionoid legume trees in Costa Rica
    • M.A. Parker rRNA and dnaK relationships of Bradyrhizobium sp. nodule bacteria from four Papilionoid legume trees in Costa Rica Syst. Appl. Microbiol. 27 2004 334 342
    • (2004) Syst. Appl. Microbiol. , vol.27 , pp. 334-342
    • Parker, M.A.1
  • 20
    • 0036667447 scopus 로고    scopus 로고
    • Conflicting phylogeographic patterns in rRNA and nifD indicate regionally restricted gene transfer in Bradyrhizobium
    • M.A. Parker, B. Lafay, J.J. Burdon, and P. van Berkum Conflicting phylogeographic patterns in rRNA and nifD indicate regionally restricted gene transfer in Bradyrhizobium Microbiology 148 2002 2557 2565
    • (2002) Microbiology , vol.148 , pp. 2557-2565
    • Parker, M.A.1    Lafay, B.2    Burdon, J.J.3    Van Berkum, P.4
  • 21
    • 0034126928 scopus 로고    scopus 로고
    • Relationships of bradyrhizobia from Platypodium and Machaerium (Papilionoideae tribe Dalbergieae) on Barro Colorado Island, Panama
    • M.A. Parker, and A. Lunk Relationships of bradyrhizobia from Platypodium and Machaerium (Papilionoideae tribe Dalbergieae) on Barro Colorado Island, Panama Int. J. Syst. Evol. Microbiol. 50 2000 1179 1186
    • (2000) Int. J. Syst. Evol. Microbiol. , vol.50 , pp. 1179-1186
    • Parker, M.A.1    Lunk, A.2
  • 22
    • 0042355274 scopus 로고    scopus 로고
    • Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica
    • J. Parkhill Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica Nat. Genet. 35 2003 32 40
    • (2003) Nat. Genet. , vol.35 , pp. 32-40
    • Parkhill, J.1
  • 23
    • 0345701207 scopus 로고    scopus 로고
    • RRNA and nifD phylogeny of Bradyrhizobium from sites across the Pacific Basin
    • J. Qian, S.W. Kwon, and M.A. Parker rRNA and nifD phylogeny of Bradyrhizobium from sites across the Pacific Basin FEMS Microbiol. Lett. 219 2003 159 165
    • (2003) FEMS Microbiol. Lett. , vol.219 , pp. 159-165
    • Qian, J.1    Kwon, S.W.2    Parker, M.A.3
  • 24
    • 0035989122 scopus 로고    scopus 로고
    • Contrasting nifD and ribosomal gene relationships among Mesorhizobium from Lotus oroboides in northern Mexico
    • J. Qian, and M.A. Parker Contrasting nifD and ribosomal gene relationships among Mesorhizobium from Lotus oroboides in northern Mexico Syst. Appl. Microbiol. 25 2002 68 73
    • (2002) Syst. Appl. Microbiol. , vol.25 , pp. 68-73
    • Qian, J.1    Parker, M.A.2
  • 25
    • 0024356449 scopus 로고
    • Statistical tests for detecting gene conversion
    • S. Sawyer Statistical tests for detecting gene conversion Mol. Biol. Evol. 6 1989 526 538
    • (1989) Mol. Biol. Evol. , vol.6 , pp. 526-538
    • Sawyer, S.1
  • 26
    • 0028801013 scopus 로고
    • Fragmentation of the large-subunit rRNA in the family Rhizobiaceae
    • S. Selenska-Pobell, and E. Evguenieva-Hackenburg Fragmentation of the large-subunit rRNA in the family Rhizobiaceae J. Bacteriol. 177 1995 6993 6998
    • (1995) J. Bacteriol. , vol.177 , pp. 6993-6998
    • Selenska-Pobell, S.1    Evguenieva-Hackenburg, E.2
  • 27
    • 0030046399 scopus 로고    scopus 로고
    • Nonrandom genotypic associations in a legume-Bradyrhizobium mutualism
    • J.M. Spoerke, H.H. Wilkinson, and M.A. Parker Nonrandom genotypic associations in a legume-Bradyrhizobium mutualism Evolution 50 1996 146 154
    • (1996) Evolution , vol.50 , pp. 146-154
    • Spoerke, J.M.1    Wilkinson, H.H.2    Parker, M.A.3
  • 28
    • 0032883089 scopus 로고    scopus 로고
    • Diversity and relationships of bradyrhizobia from Amphicarpaea bracteata based on partial nod and ribosomal sequences
    • J.P. Sterner, and M.A. Parker Diversity and relationships of bradyrhizobia from Amphicarpaea bracteata based on partial nod and ribosomal sequences Syst. Appl. Microbiol. 22 1999 387 392
    • (1999) Syst. Appl. Microbiol. , vol.22 , pp. 387-392
    • Sterner, J.P.1    Parker, M.A.2
  • 30
    • 0027968068 scopus 로고
    • Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
    • J.D. Thompson, D.G. Higgans, T.J. Gibson, and W. Clustal Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice Nucleic Acids Res. 22 1994 4673 4680
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgans, D.G.2    Gibson, T.J.3    Clustal, W.4
  • 31
    • 0344034153 scopus 로고    scopus 로고
    • Herbaspirillum lusitanum sp. nov., a novel nitrogen-fixing bacterium associated with root nodules of Phaseolus vulgaris
    • A. Valverde, E. Velazquez, C. Gutierrez, E. Cervantes, A. Ventosa, and J.M. Igual Herbaspirillum lusitanum sp. nov., a novel nitrogen-fixing bacterium associated with root nodules of Phaseolus vulgaris Int. J. Syst. Evol. Microbiol. 53 2003 1979 1983
    • (2003) Int. J. Syst. Evol. Microbiol. , vol.53 , pp. 1979-1983
    • Valverde, A.1    Velazquez, E.2    Gutierrez, C.3    Cervantes, E.4    Ventosa, A.5    Igual, J.M.6
  • 34
    • 0036959851 scopus 로고    scopus 로고
    • Burkholderia tuberum sp. nov. and Burkholderia phymatum sp. nov., nodulate the roots of tropical legumes
    • P. Vandamme, J. Goris, W.-M. Chen, P. de vos, and A. Willems Burkholderia tuberum sp. nov. and Burkholderia phymatum sp. nov., nodulate the roots of tropical legumes Syst. Appl. Microbiol. 25 2002 507 512
    • (2002) Syst. Appl. Microbiol. , vol.25 , pp. 507-512
    • Vandamme, P.1    Goris, J.2    Chen, W.-M.3    De Vos, P.4    Willems, A.5
  • 35
    • 0031775874 scopus 로고    scopus 로고
    • Burkholderia graminis sp. nov., a rhizospheric Burkholderia species, and reassessment of [Pseudomonas] phenazinium, [Pseudomonas] pyrrocinia and [Pseudomonas] glathei as Burkholderia
    • V. Viallard, I. Poirier, B. Cournoyer, J. Haurat, S. Wiebkin, K. Ophel-Keller, and J. Balandreau Burkholderia graminis sp. nov., a rhizospheric Burkholderia species, and reassessment of [Pseudomonas] phenazinium, [Pseudomonas] pyrrocinia and [Pseudomonas] glathei as Burkholderia Int. J. Syst. Bacteriol. 48 1998 549 563
    • (1998) Int. J. Syst. Bacteriol. , vol.48 , pp. 549-563
    • Viallard, V.1    Poirier, I.2    Cournoyer, B.3    Haurat, J.4    Wiebkin, S.5    Ophel-Keller, K.6    Balandreau, J.7
  • 36
    • 0029660860 scopus 로고    scopus 로고
    • Divergence in symbiotic compatibility in a legume-Bradyrhizobium mutualism
    • H.H. Wilkinson, J.M. Spoerke, and M.A. Parker Divergence in symbiotic compatibility in a legume-Bradyrhizobium mutualism Evolution 50 1996 1470 1477
    • (1996) Evolution , vol.50 , pp. 1470-1477
    • Wilkinson, H.H.1    Spoerke, J.M.2    Parker, M.A.3
  • 37
    • 0029034693 scopus 로고
    • Genetic structure of a lotic population of Burkholderia (Psuedomonas) cepacia
    • M.G. Wise, L.J. Shimkets, and J.V. Mcarthur Genetic structure of a lotic population of Burkholderia (Psuedomonas) cepacia Appl. Environ. Microbiol. 61 1995 1791 1798
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 1791-1798
    • Wise, M.G.1    Shimkets, L.J.2    McArthur, J.V.3
  • 38
    • 0032835111 scopus 로고    scopus 로고
    • Distinct types of rRNA operons exist in the genome of the acctinomycete Thermomonospora chromogena and evidence for horizontal transfer of an entire rRNA operon
    • W.H. Yap, Z. Zhang, and Y. Wang Distinct types of rRNA operons exist in the genome of the acctinomycete Thermomonospora chromogena and evidence for horizontal transfer of an entire rRNA operon J. Bacteriol. 181 1999 5201 5209
    • (1999) J. Bacteriol. , vol.181 , pp. 5201-5209
    • Yap, W.H.1    Zhang, Z.2    Wang, Y.3
  • 39
    • 0003109559 scopus 로고    scopus 로고
    • Diversity and phylogeny of rhizobia
    • J.P.W. Young, and K.E. Haukka Diversity and phylogeny of rhizobia New Phytol. 133 1996 87 94
    • (1996) New Phytol. , vol.133 , pp. 87-94
    • Young, J.P.W.1    Haukka, K.E.2
  • 40


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.