Contrasting nifD and ribosomal gene relationships among Mesorhizobium from Lotus oroboides in Northern Mexico

Systematic and Applied Microbiology

Volumn 25, Issue 1, 2002, Pages 68-73

  Qian, Jinghui ^a   Parker, Matthew A ^a  

^a BINGHAMTON UNIVERSITY   (United States)

Author keywords

16S ribosomal RNA; 23S ribosomal RNA; Nitrogenase; Recombination; Symbiotic plasmid

Indexed keywords

GENE PRODUCT; INTERNAL TRANSCRIBED SPACER; PROTEIN NIFD; RIBOSOME RNA; UNCLASSIFIED DRUG; NITROGENASE; RNA 16S; RNA 23S;

ALPHA CHAIN; ARTICLE; BACTERIUM ISOLATE; BACTERIUM ISOLATION; CONTROLLED STUDY; GENE SEQUENCE; GENE TRANSFER; LOTUS OROBOIDES; MESORHISOBIUM PLURIFARIUM; MESORHIZOBIUM; MESORHIZOBIUM AMORPHAE; MESORHIZOBIUM HUAKUII; MEXICO; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASMID; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RHIZOBIUM; RIBOSOME; SEQUENCE ANALYSIS; SOUTHERN BLOTTING; ALPHAPROTEOBACTERIA; BACTERIAL GENE; COMPARATIVE STUDY; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; LOTUS; METHODOLOGY; MICROBIOLOGY; PEDIGREE; PHYLOGENY; PLANT; RNA GENE;

BACTERIA (MICROORGANISMS); LOTUS; LOTUS OROBOIDES; MESORHIZOBIUM; MESORHIZOBIUM AMORPHAE; MESORHIZOBIUM HUAKUII; MESORHIZOBIUM LOTI; MESORHIZOBIUM PLURIFARIUM; NEGIBACTERIA; PROKARYOTA; RHIZOBIUM;

ALPHAPROTEOBACTERIA; GENES, BACTERIAL; GENES, RRNA; LOTUS; MEXICO; NITROGENASE; PEDIGREE; PHYLOGENY; PLANTS; RNA, RIBOSOMAL, 16S; RNA, RIBOSOMAL, 23S; SEQUENCE ANALYSIS, DNA;

EID: 0035989122     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1078/0723-2020-00095     Document Type: Article

References (36)

1. Testing significance of incongruence
2. Confidence limits on phylogenies: An approach using the bootstrap
3. New approaches to typing and identification of bacteria using the 16S-23S rDNA spacer region
4. Two plasmids other than the nodulation plasmid are necessary for formation of nitrogen fixing nodules by Rhizobium leguminosarum
5. Characterization of rhizobia nodulating Lotus subbiflorus from Uruguayan soils
6. Rhizobium loti, a new species of legume root nodule bacteria
7. Transfer of Rhizobium loti, Rhizobium huakuii, Rhizobium ciceri, Rhizobium tianshanense to Mesorhizobium gen. nov.
8. Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorbizobium loti
9. Molecular diversity of rhizobia occurring on native shrubby legumes in southeastern Australia
10. Genetic diversity of rhizobial symbionts isolates from legume species within the genera Astragalus, Oxytropis, and Onobrychis
11. Characterization of tropical tree rhizobia and description of Mesorhizobium plurifarium sp. nov.
12. Comparative sequence analysis of 23S rRNA from Proteobacteria
13. Relationships of bradyrhizobia from the legumes Apios americana and Desmodium glutinosum
14. Divergent Bradyrhizobium symbionts on Tachigali versicolor from Barro Colorado Island, Panama
15. Case of localized recombination in 23S rRNA genes from divergent Bradyrhizobium lineages associated with Neotropical legumes
16. Relationships of bradyrhizobia from Platypodium and Machaerium (Papilionoideae tribe Dalbergieae) on Barro Colorado Island, Panama
17. Distribution of repC plasmid-replication sequences among plasmids and isolates of Rhizobium leguminosarum bv. vicae from field populations
18. Fragmentation of the large-subunit rRNA in the family Rhizobiaceae
19. Nonrandom genotypic associations in a legume-Bradyrhizobium mutualism
20. Diversity and relationships of bradyrhizobia from Amphicarpaea bracteata based on partial nod and ribosomal sequences
21. Nodulating strains of Rhizobium loti arise through chromosomal symbiotic gene transfer in the enviroment
22. Four unnamed species of nonsymbiotic rhizobia isolated from the rhizosphere of Lotus corniculatus
23. Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene
24. Improving the sensitivity of progressive multiple sequence alignment thorugh sequence weighting, position specific gap penalties and weight matrix choice
25. Phylogenic diversity of rhizobial strains nodulating Robinia pseudoacacia L
26. Diversity of rhizobia associated with Amorpha fruticosa isolated from Chinese soils and description of Mesorhizobium amorphae sp. nov.
27. Rhizobium gone native: Unexpected plasmid stability of indigenous Rhizobium leguminosarum
28. Comparison of the evolutionary dynamics of symbiotic and housekeeping loci: A case for the genetic coherence of Rhizobium lineages
29. Divergence in symbiotic compatibility in a legume-Bradyrhizobium mutualism
30. Phylogenetic analysis of rhizobia and agrobacteria based on 16S rRNA gene sequences
31. Comparison of sequence analysis of 16S-23S rDNA spacer regions, AFLP analysis and DNA-DNA hybridizations in Bradyrhizobium
32. Sym plasmid and chromosomal genotypes are correlated in field populations of Rhizobium leguminosarum
33. Algorithms and thermodynamics for RNA secondary structure prediction: A practical guide