메뉴 건너뛰기




Volumn 50, Issue 2, 2000, Pages 743-749

Burkholderia kururiensis sp. nov., a trichloroethylene (TCE)-degrading bacterium isolated from an aquifer polluted with TCE

Author keywords

16S rRNA gene; Aquifer; Burkholderia kururiensis sp. nov.; Trichloroethylene degradation

Indexed keywords

BACTERIAL DNA; FATTY ACID; GALACTOSE; GLUCOSE; GLYCEROL; INOSITOL; MALTOSE; MANNITOL; MANNOSE; SUGAR; SUGAR ALCOHOL;

EID: 0034063440     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/00207713-50-2-743     Document Type: Article
Times cited : (110)

References (41)
  • 1
    • 0032955598 scopus 로고    scopus 로고
    • Burkholderia caribensis sp. Nov., an exopolysaccharide-producing bacterium isolated from vertisol microaggregates in Martinique
    • Achouak, W., Christen, R., Barakat, M., Martel, M.-H. & Heulin, T. (1999). Burkholderia caribensis sp. nov., an exopolysaccharide-producing bacterium isolated from vertisol microaggregates in Martinique. Int J Syst Bacteriol 49, 787-794.
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 787-794
    • Achouak, W.1    Christen, R.2    Barakat, M.3    Martel, M.-H.4    Heulin, T.5
  • 2
    • 0028799572 scopus 로고
    • Sequence analysis of the gene cluster encoding toluene-3-monooxygenase from Pseudomonas pickettii PKO1
    • Byrne, A. M., Kukor, J. J. & Olsen, R. H. (1995). Sequence analysis of the gene cluster encoding toluene-3-monooxygenase from Pseudomonas pickettii PKO1. Gene 154, 65-70.
    • (1995) Gene , vol.154 , pp. 65-70
    • Byrne, A.M.1    Kukor, J.J.2    Olsen, R.H.3
  • 3
    • 0025976406 scopus 로고
    • Molecular analysis of the methane monooxygenase (MMO) gene cluster of Methylosinus trichosporium OB3b
    • Cardy, D. L., Laidler, V., Salmond, G. P. C. & Murrell, J. C. (1991). Molecular analysis of the methane monooxygenase (MMO) gene cluster of Methylosinus trichosporium OB3b. Mol Microbiol 5, 335-342.
    • (1991) Mol Microbiol , vol.5 , pp. 335-342
    • Cardy, D.L.1    Laidler, V.2    Salmond, G.P.C.3    Murrell, J.C.4
  • 4
    • 0032960499 scopus 로고    scopus 로고
    • Burkholderia cocovenenans (van Damme et al. 1960) Gillis et al. 1995 and Burkholderia vandii Urakami et al. 1994 are junior synonyms of Burkholderia gladioli (Severini 1913) Yabuuchi et al. 1993 and Burkholderia plantarii (Azegami et al. 1987) Urakami et al. 1994, respectively
    • Coenye, T., Holmes, B., Kersters, K., Govan, J. R. W. & Vandamme, P. (1999). Burkholderia cocovenenans (van Damme et al. 1960) Gillis et al. 1995 and Burkholderia vandii Urakami et al. 1994 are junior synonyms of Burkholderia gladioli (Severini 1913) Yabuuchi et al. 1993 and Burkholderia plantarii (Azegami et al. 1987) Urakami et al. 1994, respectively. Int J Syst Bacteriol 49, 37-42.
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 37-42
    • Coenye, T.1    Holmes, B.2    Kersters, K.3    Govan, J.R.W.4    Vandamme, P.5
  • 5
    • 0026628374 scopus 로고
    • Isopropylbenzene (cumene) - A new substrate for the isolation of trichloroethylene-degrading bacteria
    • Dabrock, B., Riedel, J., Bertram, J. & Gottschalk, G. (1992). Isopropylbenzene (cumene) - a new substrate for the isolation of trichloroethylene-degrading bacteria. Arch Microbiol 158, 9-13.
    • (1992) Arch Microbiol , vol.158 , pp. 9-13
    • Dabrock, B.1    Riedel, J.2    Bertram, J.3    Gottschalk, G.4
  • 6
    • 0025248690 scopus 로고
    • Phenol and trichloroethylene degradation by Pseudomonas cepacia G4: Kinetics and interactions between substrates
    • Folsom, B. P., Chapman, P. J. & Pritchard, P. H. (1990). Phenol and trichloroethylene degradation by Pseudomonas cepacia G4: kinetics and interactions between substrates. Appl Environ Microbiol 56, 1279-1285.
    • (1990) Appl Environ Microbiol , vol.56 , pp. 1279-1285
    • Folsom, B.P.1    Chapman, P.J.2    Pritchard, P.H.3
  • 7
    • 0028785791 scopus 로고
    • Chloroflexus aggregans sp. Nov., a filamentous phototrophic bacterium which forms dense cell aggregates by active gliding movement
    • Hanada, S., Hiraishi, A., Shimada, K. & Matsuura, K. (1995). Chloroflexus aggregans sp. nov., a filamentous phototrophic bacterium which forms dense cell aggregates by active gliding movement. Int J Syst Bacteriol 45, 676-681.
    • (1995) Int J Syst Bacteriol , vol.45 , pp. 676-681
    • Hanada, S.1    Hiraishi, A.2    Shimada, K.3    Matsuura, K.4
  • 9
    • 0025231263 scopus 로고
    • Trichloroethylene degradation by two independent aromatic-degrading pathways in Alcaligenes eutrophus JMP134
    • Harker, A. R. & Kim, Y. (1990). Trichloroethylene degradation by two independent aromatic-degrading pathways in Alcaligenes eutrophus JMP134. Appl Environ Microbiol 4, 1179-1181.
    • (1990) Appl Environ Microbiol , vol.4 , pp. 1179-1181
    • Harker, A.R.1    Kim, Y.2
  • 10
    • 0028944326 scopus 로고
    • Localization and organization of phenol degradation genes of Pseudomanas putida strain H
    • Herrmann, H., Muller, C., Schmidt, I., Mahnke, J., Petruschka, L. & Hahnke, K. (1995). Localization and organization of phenol degradation genes of Pseudomanas putida strain H. Mol Gen Genet 247, 240-246.
    • (1995) Mol Gen Genet , vol.247 , pp. 240-246
    • Herrmann, H.1    Muller, C.2    Schmidt, I.3    Mahnke, J.4    Petruschka, L.5    Hahnke, K.6
  • 11
    • 0026455131 scopus 로고
    • Direct automated sequencing of 16S rDNA amplified by polymerase chain reaction from bacterial cultures without DNA purification
    • Hiraishi, A. (1992). Direct automated sequencing of 16S rDNA amplified by polymerase chain reaction from bacterial cultures without DNA purification. Lett Appl Microbiol 15, 210-213.
    • (1992) Lett Appl Microbiol , vol.15 , pp. 210-213
    • Hiraishi, A.1
  • 12
    • 0028064005 scopus 로고
    • Automated sequencing of PCR-amplified 16S rDNA on 'Hydrolink' gels
    • Hiraishi, A., Shin, Y. K., Ueda, Y. & Sugiyama, J. (1994). Automated sequencing of PCR-amplified 16S rDNA on 'Hydrolink' gels. J Microbiol Methods 19, 145-154.
    • (1994) J Microbiol Methods , vol.19 , pp. 145-154
    • Hiraishi, A.1    Shin, Y.K.2    Ueda, Y.3    Sugiyama, J.4
  • 13
    • 0025764192 scopus 로고
    • Isolation and characterization of a novel thermophilic Methanosaeta strain
    • Kamagata, Y. & Mikami, E. (1991). Isolation and characterization of a novel thermophilic Methanosaeta strain. Int J Syst Bacteriol 41, 191-196.
    • (1991) Int J Syst Bacteriol , vol.41 , pp. 191-196
    • Kamagata, Y.1    Mikami, E.2
  • 14
    • 0029812685 scopus 로고    scopus 로고
    • Constitutive expression of the cloned phenol hydroxylase gene(s) from Alcaligenes eutrophus JMP134 and concomitant trichloroethylene oxidation
    • Kim, Y. J., Ayoubi, P. & Harker, A. R. (1996). Constitutive expression of the cloned phenol hydroxylase gene(s) from Alcaligenes eutrophus JMP134 and concomitant trichloroethylene oxidation. Appl Environ Microbiol 62, 3227-3233.
    • (1996) Appl Environ Microbiol , vol.62 , pp. 3227-3233
    • Kim, Y.J.1    Ayoubi, P.2    Harker, A.R.3
  • 16
    • 0018947232 scopus 로고
    • An improved embedding method using ERL 4206 and Quetol 653
    • Kushida, H. (1980). An improved embedding method using ERL 4206 and Quetol 653. J Electron Microsc 29, 193-194.
    • (1980) J Electron Microsc , vol.29 , pp. 193-194
    • Kushida, H.1
  • 18
    • 0030986084 scopus 로고    scopus 로고
    • The soluble methane monooxygenase gene cluster of the trichloroethylene-degrading methanotroph Methyocystis sp. Strain M
    • McDonald, I. R., Uchiyama, H., Kambe, S., Yagi, O. & Murrell, J. C. (1997). The soluble methane monooxygenase gene cluster of the trichloroethylene-degrading methanotroph Methyocystis sp. strain M. Appl Environ Microbiol 63, 1898-1904.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 1898-1904
    • McDonald, I.R.1    Uchiyama, H.2    Kambe, S.3    Yagi, O.4    Murrell, J.C.5
  • 19
    • 0016753240 scopus 로고
    • A more reliable gram staining technique for diagnosis of surgical infections
    • Magee, C. M., Rodeheaver, G. & Edgerton, R. F. (1975). A more reliable gram staining technique for diagnosis of surgical infections Am J Surg 130, 341-346.
    • (1975) Am J Surg , vol.130 , pp. 341-346
    • Magee, C.M.1    Rodeheaver, G.2    Edgerton, R.F.3
  • 20
    • 0023227919 scopus 로고
    • Biodegradation of trichloroethylene and the involvement of an aromatic biodegradative pathway
    • Nelson, M. J. K., Montgomery, S. O., Mahaffey, W. R. & Pritchard, P. H. (1987). Biodegradation of trichloroethylene and the involvement of an aromatic biodegradative pathway. Appl Environ Microbiol 53, 949-954.
    • (1987) Appl Environ Microbiol , vol.53 , pp. 949-954
    • Nelson, M.J.K.1    Montgomery, S.O.2    Mahaffey, W.R.3    Pritchard, P.H.4
  • 21
    • 0023958168 scopus 로고
    • Trichloroethylene metabolism by microorganisms that degrade aromatic compounds
    • Nelson, M. J. K., Montgomery, S. O. & Pritchard, P. H. (1988). Trichloroethylene metabolism by microorganisms that degrade aromatic compounds. Appl Environ Microbiol 54, 604-606.
    • (1988) Appl Environ Microbiol , vol.54 , pp. 604-606
    • Nelson, M.J.K.1    Montgomery, S.O.2    Pritchard, P.H.3
  • 22
    • 0025602269 scopus 로고
    • Complete nucleotide sequence and polypeptide analysis of multicomponent hydroxylase from Pseudomonas sp. Strain CF600
    • Nordlund, I., Powlowski, J. & Shingler, V. (1990). Complete nucleotide sequence and polypeptide analysis of multicomponent hydroxylase from Pseudomonas sp. strain CF600. J Bacteriol 172, 6826-6833.
    • (1990) J Bacteriol , vol.172 , pp. 6826-6833
    • Nordlund, I.1    Powlowski, J.2    Shingler, V.3
  • 23
    • 0000803252 scopus 로고
    • Genus I. Pseudomonas Migula 1894
    • Edited by N. R. Krieg & J. G. Holt. Baltimore: Williams & Wilkins
    • Palleroni, N. J. (1984). Genus I. Pseudomonas Migula 1894. In Bergey's Manual of Systematic Bacteriology, vol. 1, pp. 141-199. Edited by N. R. Krieg & J. G. Holt. Baltimore: Williams & Wilkins.
    • (1984) Bergey's Manual of Systematic Bacteriology , vol.1 , pp. 141-199
    • Palleroni, N.J.1
  • 24
    • 50549178319 scopus 로고
    • Preparation of transforming deoxyribonucleic acid by phenol treatment
    • Saito, H. & Miura, K. (1963). Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta 72, 619-629.
    • (1963) Biochim Biophys Acta , vol.72 , pp. 619-629
    • Saito, H.1    Miura, K.2
  • 25
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 26
    • 0000562339 scopus 로고
    • Edited by A. Balows, Jr, W. J. Hausler, K. Herrmann, H. Isenberg & H. J. Shadomy. Washington, DC: American Society for Microbiology
    • Sasser, M. & Wichman, M. D. (1991). Manual of Clinical Microbiology. 5th edn, pp. 111-118. Edited by A. Balows, Jr, W. J. Hausler, K. Herrmann, H. Isenberg & H. J. Shadomy. Washington, DC: American Society for Microbiology.
    • (1991) Manual of Clinical Microbiology. 5th Edn , pp. 111-118
    • Sasser, M.1    Wichman, M.D.2
  • 28
    • 0000612080 scopus 로고
    • Phenotypic characterization
    • Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
    • Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
    • (1994) Methods for General and Molecular Bacteriology
    • Smibert, R.M.1    Krieg, N.R.2
  • 29
    • 0027473627 scopus 로고
    • Biodegradation kinetics of Methylosinus trichosporium OB3b at low concentrations of chloroform in the presence and absence of enzyme competition by methane
    • Speitel, G. E., Jr, Thompson, R. C. & Weissman, D. (1993). Biodegradation kinetics of Methylosinus trichosporium OB3b at low concentrations of chloroform in the presence and absence of enzyme competition by methane. Water Res 27, 15-24.
    • (1993) Water Res , vol.27 , pp. 15-24
    • Speitel, G.E.1    Thompson R.C., Jr.2    Weissman, D.3
  • 30
    • 0025006802 scopus 로고
    • The methane monooxygenase gene cluster of Methylococcus capsulatus (Bath)
    • Stainthorpe, A. C., Lees, V., Salmond, G. P. C., Dalton, H. & Murrell, J. C. (1990). The methane monooxygenase gene cluster of Methylococcus capsulatus (Bath). Gene 91, 27-34.
    • (1990) Gene , vol.91 , pp. 27-34
    • Stainthorpe, A.C.1    Lees, V.2    Salmond, G.P.C.3    Dalton, H.4    Murrell, J.C.5
  • 31
    • 0020638681 scopus 로고
    • Analysis of bacterial menaquinone mixtures by high performance liquid chromatography
    • Tamaoka, J., Katayama-Fujimura, Y. & Kuraishi, H. (1983). Analysis of bacterial menaquinone mixtures by high performance liquid chromatography. J Appl Bacteriol 54, 31-36.
    • (1983) J Appl Bacteriol , vol.54 , pp. 31-36
    • Tamaoka, J.1    Katayama-Fujimura, Y.2    Kuraishi, H.3
  • 32
    • 0027968068 scopus 로고
    • Clustal w: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Rex 22, 4673-4680.
    • (1994) Nucleic Acids Rex , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 33
    • 0024377330 scopus 로고
    • Biodegradation of trichloroethylene by Methylosinus trichosporium OB3b
    • Tsein, H. C., Brusseau, G. A., Hanson, R. S. & Wackett, L. P. (1989). Biodegradation of trichloroethylene by Methylosinus trichosporium OB3b. Appl Environ Microbiol 55, 3155-3161.
    • (1989) Appl Environ Microbiol , vol.55 , pp. 3155-3161
    • Tsein, H.C.1    Brusseau, G.A.2    Hanson, R.S.3    Wackett, L.P.4
  • 34
    • 0028207615 scopus 로고
    • Transfer of Pseudomonas plantarii and Pseudomonas glumae to Burkholderia as Burkholderia spp. And description of Burkholderia vandii sp. Nov
    • Urakami, T., Ito-Yoshida, C., Araki, H., Kijima, T., Suzuki, K.-I. & Komagata, K. (1994). Transfer of Pseudomonas plantarii and Pseudomonas glumae to Burkholderia as Burkholderia spp. and description of Burkholderia vandii sp. nov. Int J Syst Bacteriol 44, 235-245.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 235-245
    • Urakami, T.1    Ito-Yoshida, C.2    Araki, H.3    Kijima, T.4    Suzuki, K.-I.5    Komagata, K.6
  • 35
    • 0031775874 scopus 로고    scopus 로고
    • Burkholderia graminis sp. Nov., a rhizospheric Burkholderia species, and reassessment of [Pseudomonas] phenazinium, [Pseudomonas] pyrrocinia and [Pseudomonas] glathei as Burkholderia
    • Viallard, V., Poirier, I., Cournoyer, B., Haurat, J., Wiebkin, S., Ophel-Keller, K. & Balandreau, J. (1998). Burkholderia graminis sp. nov., a rhizospheric Burkholderia species, and reassessment of [Pseudomonas] phenazinium, [Pseudomonas] pyrrocinia and [Pseudomonas] glathei as Burkholderia, Int J Syst Bacteriol 48, 549-563.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 549-563
    • Viallard, V.1    Poirier, I.2    Cournoyer, B.3    Haurat, J.4    Wiebkin, S.5    Ophel-Keller, K.6    Balandreau, J.7
  • 36
    • 0024429904 scopus 로고
    • Toxicity of trichloroethylene to Psedomonas putida F1 is mediated by toluene dioxygenase
    • Wackett, L. P. & Householder, S. R. (1989). Toxicity of trichloroethylene to Psedomonas putida F1 is mediated by toluene dioxygenase. Appl Environ Microbiol 55, 2723-2725.
    • (1989) Appl Environ Microbiol , vol.55 , pp. 2723-2725
    • Wackett, L.P.1    Householder, S.R.2
  • 37
    • 0024463372 scopus 로고
    • A survey of microbial oxygenases: Trichloroethylene degradation by propane-oxidizing bacteria
    • Wackett, L. P., Brusseau, G. A., Householder, S. R. & Hanson, R. S. (1989). A survey of microbial oxygenases: trichloroethylene degradation by propane-oxidizing bacteria. Appl Environ Microbiol 55, 2960-2964.
    • (1989) Appl Environ Microbiol , vol.55 , pp. 2960-2964
    • Wackett, L.P.1    Brusseau, G.A.2    Householder, S.R.3    Hanson, R.S.4
  • 38
    • 0026086561 scopus 로고
    • Applications of cellular fatty acid analysis
    • Welch, D. E. (1991). Applications of cellular fatty acid analysis. Clin Microbiol Rev 4, 422-438.
    • (1991) Clin Microbiol Rev , vol.4 , pp. 422-438
    • Welch, D.E.1
  • 39
    • 0027096070 scopus 로고
    • Proposal of Burkholderia gen. Nov. And transfer of seven species of the genus Pseudomonas homology group II to the new genus, with the type species Burkholderia cepacia (Palleroni and Holmes 1981) comb. Nov
    • Yabuuchi, E., Kosako, Y., Oyaizu, H., Yano, I., Hotta, H., Hashimoto, Y., Ezaki, T. & Arakawa, M. (1992). Proposal of Burkholderia gen. nov. and transfer of seven species of the genus Pseudomonas homology group II to the new genus, with the type species Burkholderia cepacia (Palleroni and Holmes 1981) comb. nov. Microbiol Immunol 36, 1251-1275.
    • (1992) Microbiol Immunol , vol.36 , pp. 1251-1275
    • Yabuuchi, E.1    Kosako, Y.2    Oyaizu, H.3    Yano, I.4    Hotta, H.5    Hashimoto, Y.6    Ezaki, T.7    Arakawa, M.8
  • 40
    • 0028850433 scopus 로고
    • Transfer of two Burkholderia and an Alcaligenes species to Ralstonia gen. Nov.: Proposal of Ralstonia pickettii (Ralston, Palleroni and Doudoroff 1973) comb, nov., Ralstonia solanucearum (Smith 1896) comb. Nov. And Ralstonia eutropha (Davis 1969) comb. Nov
    • Yabuuchi, E., Kosako, Y., Yano, I., Hotta, H. & Nishiuchi, Y. (1995). Transfer of two Burkholderia and an Alcaligenes species to Ralstonia gen. nov.: proposal of Ralstonia pickettii (Ralston, Palleroni and Doudoroff 1973) comb, nov., Ralstonia solanucearum (Smith 1896) comb. nov. and Ralstonia eutropha (Davis 1969) comb. Nov. Microbiol Immunol 39, 897-904.
    • (1995) Microbiol Immunol , vol.39 , pp. 897-904
    • Yabuuchi, E.1    Kosako, Y.2    Yano, I.3    Hotta, H.4    Nishiuchi, Y.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.