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53
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85030913641
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note
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Job plots were used to confirm the 2:1 stoichiometry of the complexes formed as previously described: (a) Ref. 19.
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57
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85030890413
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note
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Ab inition minimization (at the HF/6-31G* level of theory) was carried out on model compounds corresponding to the core backbone structure of monomers 1 , 4 and 5 , respectively. These calculations provided unambiguous evidence of the order of polarity of these analogs (most polar 5 ≫ 4 > 1 least polar); a significant increase in polarity is expected to correlate with an increase in the solubility of that compound in aqueous media. In addition, we observed the anticipated differences in the retention time for each compound on a C18 reversed phase HPLC column. Finally, although the exact solubility of each compound was not determined, qualitatively it was clearly apparent that the new APNA monomers 4 and 5 were more soluble in polar solvents than the first generation analog 1 .
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For a recent review on the importance of aromatic interactions in molecular recognition, including in a biological context see:
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For a recent review on the importance of aromatic interactions in molecular recognition, including in a biological context see: Meyer E.A., Castellano R.K., Diederich F. Angew. Chem., Int. Ed. 42:2003;1210-1250.
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Meyer, E.A.1
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For reviews on the RNA recognition of proteins involved in RNA processing, see: (a)
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0036591656
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For a recent review on π-cation interactions in small molecule-biomolecule recognition see: (a)
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For a recent review on π-cation interactions in small molecule-biomolecule recognition see: (a) Zacharias N., Dougherty D.A. Trends Pharmacol. Sci. 23:2002;281-287.
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Zacharias, N.1
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85030906244
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note
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See also Ref. 34.
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67
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0029044163
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For synthesis of PNA on a Trityl-based resin see:
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For synthesis of PNA on a Trityl-based resin see: Thomson S.A., Josey J.A., Cadilla R., Gaul M.D., Hassman C.F., Luzzio M.J., Pipe A.J., Reed K.L., Ricca D.J., Wiethe R.W., Noble S.A. Tetrahedron. 51:1995;6179-6194.
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Thomson, S.A.1
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Ricca, D.J.9
Wiethe, R.W.10
Noble, S.A.11
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68
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Modifications to the synthesis cycles for Fmoc-synthesis of PNA oligomers were as previously described. See Ref. 20b.
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Modifications to the synthesis cycles for Fmoc-synthesis of PNA oligomers were as previously described. See Ref. 20b.
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