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Volumn 168, Issue 4, 2004, Pages 2127-2140

High-resolution fine mapping and fluorescence in Situ hybridization analysis of sun, a locus controlling tomato fruit shape, reveals a region of the tomato genome prone to DNA rearrangements

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHROMOSOME 7; CHROMOSOME ARM; CHROMOSOME BREAKAGE; CHROMOSOME INVERSION; DNA FLANKING REGION; FLUORESCENCE IN SITU HYBRIDIZATION; GENE FREQUENCY; GENE LIBRARY; GENE LOCUS; GENE MAPPING; GENE REARRANGEMENT; GENOME ANALYSIS; MOLECULAR CLONING; MORPHOLOGY; NONHUMAN; PACHYTENE; PRIORITY JOURNAL; TOMATO;

EID: 11244249544     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: 10.1534/genetics.104.031013     Document Type: Article
Times cited : (68)

References (39)
  • 1
    • 0030479076 scopus 로고    scopus 로고
    • High-resolution mapping and isolation of a yeast artificial chromosome contig containing fw2.2: A major fruit weight quantitative trait locus in tomato
    • ALPERT, K. B., and S. D. TANKSLEY, 1996 High-resolution mapping and isolation of a yeast artificial chromosome contig containing fw2.2: a major fruit weight quantitative trait locus in tomato. Proc. Nad. Acad. Sci. USA 93: 15503-15507.
    • (1996) Proc. Nad. Acad. Sci. USA , vol.93 , pp. 15503-15507
    • Alpert, K.B.1    Tanksley, S.D.2
  • 2
    • 0000364979 scopus 로고
    • Towards a saturated linkage map in tomato based on isozymes and random cDNA sequences
    • BERNATZKY, R., and S. D. TANKSLEY, 1986 Towards a saturated linkage map in tomato based on isozymes and random cDNA sequences. Genetics 112: 887-898.
    • (1986) Genetics , vol.112 , pp. 887-898
    • Bernatzky, R.1    Tanksley, S.D.2
  • 3
    • 0031029151 scopus 로고    scopus 로고
    • Tomato chromosome 1: High resolution genetic and physical mapping of the short arm in an interspecific Lycopersicon esculentum X L. peruvianum cross
    • BONNEMA, G., D. SCHIPPER, S. VAN HEUSDEN, P. ZABEL and P. LINDHOUT, 1997 Tomato chromosome 1: high resolution genetic and physical mapping of the short arm in an interspecific Lycopersicon esculentum X L. peruvianum cross. Mol. Gen. Genet. 253: 455-462.
    • (1997) Mol. Gen. Genet. , vol.253 , pp. 455-462
    • Bonnema, G.1    Schipper, D.2    Van Heusden, S.3    Zabel, P.4    Lindhout, P.5
  • 4
    • 0033977088 scopus 로고    scopus 로고
    • A deep-coverage tomato BAG library and prospects toward development of an STC framework for genome sequencing
    • BUDIMAN, M. A., L. MAO, T. C. WOOD and R. A. WING, 2000 A deep-coverage tomato BAG library and prospects toward development of an STC framework for genome sequencing. Genome Res. 10: 129-136.
    • (2000) Genome Res. , vol.10 , pp. 129-136
    • Budiman, M.A.1    Mao, L.2    Wood, T.C.3    Wing, R.A.4
  • 5
    • 0036671930 scopus 로고    scopus 로고
    • A comparative genetic linkage map of eggplant (Solanum melongena] and its implications for genome evolution in the Solanaceae
    • DOGANLAR, S., A. FRARY, M. C. DAUNAY, R. N. LESTER and S. D. TANKSLEY, 2002 A comparative genetic linkage map of eggplant (Solanum melongena] and its implications for genome evolution in the Solanaceae. Genetics 161: 1697-1711.
    • (2002) Genetics , vol.161 , pp. 1697-1711
    • Doganlar, S.1    Frary, A.2    Daunay, M.C.3    Lester, R.N.4    Tanksley, S.D.5
  • 6
    • 34249770724 scopus 로고
    • A genomic library of Lycopersicon pennellii in Lycopersicon esculentum-a tool for fine mapping of genes
    • ESHED, Y., and D. ZAMIR, 1994 A genomic library of Lycopersicon pennellii in Lycopersicon esculentum-a tool for fine mapping of genes. Euphytica 79: 175-179.
    • (1994) Euphytica , vol.79 , pp. 175-179
    • Eshed, Y.1    Zamir, D.2
  • 7
    • 0033977072 scopus 로고    scopus 로고
    • Saturation mapping of a gene-rich recombination hot spot region in wheat
    • FARIS, J. D., K. M. HAEN and B. S. GILL, 2000 Saturation mapping of a gene-rich recombination hot spot region in wheat. Genetics 154: 823-835.
    • (2000) Genetics , vol.154 , pp. 823-835
    • Faris, J.D.1    Haen, K.M.2    Gill, B.S.3
  • 8
    • 0020793569 scopus 로고
    • A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity
    • FEINBERG, A. P., and B. VOGELSTEIN, 1983 A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132: 6-13.
    • (1983) Anal. Biochem. , vol.132 , pp. 6-13
    • Feinberg, A.P.1    Vogelstein, B.2
  • 9
    • 0029933320 scopus 로고    scopus 로고
    • Molecular mapping of the centromeres of tomato chromosomes 7 and 9
    • FRARY, A., G. G. PRESTING and S. D. TANKSLEY, 1996 Molecular mapping of the centromeres of tomato chromosomes 7 and 9. Mol. Gen. Genet. 250: 295-304.
    • (1996) Mol. Gen. Genet. , vol.250 , pp. 295-304
    • Frary, A.1    Presting, G.G.2    Tanksley, S.D.3
  • 10
    • 0034617236 scopus 로고    scopus 로고
    • fw2.2: A quantitative trait locus key to the evolution of tomato fruit size
    • FRARY, A., T. C. NESBITT, A. FRARY, S. GRANDILLO, E. VAN DER KNAAP et al., 2000 fw2.2: a quantitative trait locus key to the evolution of tomato fruit size. Science 289: 85-88.
    • (2000) Science , vol.289 , pp. 85-88
    • Frary, A.1    Nesbitt, T.C.2    Frary, A.3    Grandillo, S.4    Van Der Knaap, E.5
  • 11
    • 0034712852 scopus 로고    scopus 로고
    • A recombination hotspot delimits a wild-species quantitative trait locus for tomato sugar content to 484 bp within an invertase gene
    • FRIDMAN, E., T. PLEBAN and D. ZAMIR, 2000 A recombination hotspot delimits a wild-species quantitative trait locus for tomato sugar content to 484 bp within an invertase gene. Proc. Natl. Acad. Sci. USA 97: 4718-4723.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 4718-4723
    • Fridman, E.1    Pleban, T.2    Zamir, D.3
  • 12
    • 51249166384 scopus 로고
    • Microprep protocol for extraction of DNA from tomato and other herbaceous plants
    • FULTON, T. M., J. CHUNWONGSE and S. D. TANKSLEY, 1995 Microprep protocol for extraction of DNA from tomato and other herbaceous plants. Plant Mol. Biol. Rep. 13: 207-209.
    • (1995) Plant Mol. Biol. Rep. , vol.13 , pp. 207-209
    • Fulton, T.M.1    Chunwongse, J.2    Tanksley, S.D.3
  • 13
    • 0001485610 scopus 로고
    • Pulsed-field gel electrophoresis and physical mapping of large DNA fragments in the Tm-2a region of chromosome 9 in tomato
    • GANAL, M. W., N. D. YOUNG and S. D. TANKSLEY, 1989 Pulsed-field gel electrophoresis and physical mapping of large DNA fragments in the Tm-2a region of chromosome 9 in tomato. Mol. Gen. Genet. 215: 395-400.
    • (1989) Mol. Gen. Genet. , vol.215 , pp. 395-400
    • Ganal, M.W.1    Young, N.D.2    Tanksley, S.D.3
  • 14
  • 15
    • 0029833762 scopus 로고    scopus 로고
    • QTL analysis of horticultural traits differentiating the cultivated tomato from the closely related species Lycopersicon pimpinellifolium
    • GRANDILLO, S., and S. D. TANKSLEY, 1996 QTL analysis of horticultural traits differentiating the cultivated tomato from the closely related species Lycopersicon pimpinellifolium. Theor. Appl. Genet. 92: 935-951.
    • (1996) Theor. Appl. Genet. , vol.92 , pp. 935-951
    • Grandillo, S.1    Tanksley, S.D.2
  • 16
    • 0032749802 scopus 로고    scopus 로고
    • Identifying the loci responsible for natural variation in fruit size and shape in tomato
    • GRANDILLO, S., H. M. Ku and S. D. TANKSLEY, 1999 Identifying the loci responsible for natural variation in fruit size and shape in tomato. Theor. Appl. Genet. 99: 978-987.
    • (1999) Theor. Appl. Genet. , vol.99 , pp. 978-987
    • Grandillo, S.1    Ku, H.M.2    Tanksley, S.D.3
  • 17
    • 0036009770 scopus 로고    scopus 로고
    • Cloning of tangerine from tomato reveals a carotenoid isomerase essential for the production of beta-carotene and xanthophylls in plants
    • ISAACSON, T., G. RONEN, D. ZAMIR and J. HIRSCHBERG, 2002 Cloning of tangerine from tomato reveals a carotenoid isomerase essential for the production of beta-carotene and xanthophylls in plants. Plant Cell 14: 333-342.
    • (2002) Plant Cell , vol.14 , pp. 333-342
    • Isaacson, T.1    Ronen, G.2    Zamir, D.3    Hirschberg, J.4
  • 18
    • 15444355385 scopus 로고    scopus 로고
    • Application of fiber-FISH in physical mapping of Arabidopsis thaliana
    • JACKSON, S. A., M. L. WANG, H. M. GOODMAN and J. JIANG, 1998 Application of fiber-FISH in physical mapping of Arabidopsis thaliana. Genome 41: 566-572.
    • (1998) Genome , vol.41 , pp. 566-572
    • Jackson, S.A.1    Wang, M.L.2    Goodman, H.M.3    Jiang, J.4
  • 19
    • 0030478537 scopus 로고    scopus 로고
    • A conserved repetitive DNA element located in the centromeres of cereal chromosomes
    • JIANG, J., S. NASUDA, F. DONG, C. W. SCHERRER, S. S. WOO et al., 1996 A conserved repetitive DNA element located in the centromeres of cereal chromosomes. Proc. Natl. Acad. Sci. USA 93: 14210-14213.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 14210-14213
    • Jiang, J.1    Nasuda, S.2    Dong, F.3    Scherrer, C.W.4    Woo, S.S.5
  • 20
    • 0031909592 scopus 로고    scopus 로고
    • Genetic and physical localization of the root-knot nematode resistance locus Mi in tomato
    • KALOSHIAN, I., J. YAGHOOBI, T. LIHARSKA, J. HONTELEZ, D. HANSON et al., 1998 Genetic and physical localization of the root-knot nematode resistance locus Mi in tomato. Mol. Gen. Genet. 257: 376-385.
    • (1998) Mol. Gen. Genet. , vol.257 , pp. 376-385
    • Kaloshian, I.1    Yaghoobi, J.2    Liharska, T.3    Hontelez, J.4    Hanson, D.5
  • 21
    • 0027650566 scopus 로고
    • A procedure for mapping Arabidopsis mutation using codominant ecotype-specific PCR-based markers
    • KONIECZNY, A., and F. M. AUSUBEL, 1993 A procedure for mapping Arabidopsis mutation using codominant ecotype-specific PCR-based markers. Plant J. 4: 403-410.
    • (1993) Plant J. , vol.4 , pp. 403-410
    • Konieczny, A.1    Ausubel, F.M.2
  • 22
    • 11244320810 scopus 로고    scopus 로고
    • Genome mapping in Capsicum and the evolution of genome structure in the Solanaceae
    • LIVINGSTONE, K. D., V. K. LACKNEY, J. R. BLAUTH, R. VAN WIJK and M. K. JAHN, 1999 Genome mapping in Capsicum and the evolution of genome structure in the Solanaceae. Genetics 161: 1697-1711.
    • (1999) Genetics , vol.161 , pp. 1697-1711
    • Livingstone, K.D.1    Lackney, V.K.2    Blauth, J.R.3    Van Wijk, R.4    Jahn, M.K.5
  • 23
    • 0034920406 scopus 로고    scopus 로고
    • Sequence and analysis of the tomato JOINTLESS locus
    • MAO, L., D. BEGUM, S. A. GOFF and R. A. WING, 2001 Sequence and analysis of the tomato JOINTLESS locus. Plant Physiol. 126: 1331-1340.
    • (2001) Plant Physiol. , vol.126 , pp. 1331-1340
    • Mao, L.1    Begum, D.2    Goff, S.A.3    Wing, R.A.4
  • 24
    • 0030814207 scopus 로고    scopus 로고
    • Implications for the phylogeny, classification, and biogeography of Solanum from cpDNA restriction site variation
    • OLMSTEAD, R. G., and J. D. PALMER, 1997 Implications for the phylogeny, classification, and biogeography of Solanum from cpDNA restriction site variation. Syst. Bot. 22: 19-29.
    • (1997) Syst. Bot. , vol.22 , pp. 19-29
    • Olmstead, R.G.1    Palmer, J.D.2
  • 25
    • 0000050072 scopus 로고    scopus 로고
    • Status of genome mapping tools in the taxon Solanaceae
    • edited by A. Paterson. R. G. Landes, Austin, TX
    • PILLEN, K., O. PINEDA, C. LEWIS and S. D. TANKSLEY, 1996 Status of genome mapping tools in the taxon Solanaceae, pp. 281-308 in Genome Mapping in Plants, edited by A. PATERSON. R. G. Landes, Austin, TX.
    • (1996) Genome Mapping in Plants , pp. 281-308
    • Pillen, K.1    Pineda, O.2    Lewis, C.3    Tanksley, S.D.4
  • 26
    • 0031835077 scopus 로고    scopus 로고
    • The SELF-PRUNING gene of tomato regulates vegetative to reproductive switching of sympodial meristems and is the ortholog of CEN and TFL1
    • PNUELI, L., L. CARMEL-GOREN, D. HAREVEN, T. GUTFINGER, J. ALVAREZ et al., 1998 The SELF-PRUNING gene of tomato regulates vegetative to reproductive switching of sympodial meristems and is the ortholog of CEN and TFL1. Development 125: 1979-1989.
    • (1998) Development , vol.125 , pp. 1979-1989
    • Pnueli, L.1    Carmel-Goren, L.2    Hareven, D.3    Gutfinger, T.4    Alvarez, J.5
  • 29
    • 0001961455 scopus 로고
    • Species-specific DNA sequences for the identification of somatic hybrids between Lycopersicon esculentum and Solanum acaule
    • SCHWEIZER, G., M. W. GANAL, H. NINNEMANN and V. HEMLEBEN, 1988 Species-specific DNA sequences for the identification of somatic hybrids between Lycopersicon esculentum and Solanum acaule. Theor. Appl. Genet. 75: 679-684.
    • (1988) Theor. Appl. Genet. , vol.75 , pp. 679-684
    • Schweizer, G.1    Ganal, M.W.2    Ninnemann, H.3    Hemleben, V.4
  • 30
    • 0026571798 scopus 로고
    • Correlation of genetic and physical structure in the region surrounding the 12 Fusarium-oxysporum resistance locus in tomato
    • SEGAL, G., M. SARFATTI, M. A. SCHAFFER, N. ORI, D. ZAMIR et al., 1992 Correlation of genetic and physical structure in the region surrounding the 12 Fusarium-oxysporum resistance locus in tomato. Mol. Gen. Genet. 231: 179-185.
    • (1992) Mol. Gen. Genet. , vol.231 , pp. 179-185
    • Segal, G.1    Sarfatti, M.2    Schaffer, M.A.3    Ori, N.4    Zamir, D.5
  • 32
    • 0030660620 scopus 로고    scopus 로고
    • Detection of numerous Y chromosome biallelic polymorphisms by denaturing high-performance liquid chromatography
    • UNDERHILL, P. A., L. JIN, A. A. LIN, S. Q. MEHDI, T. JENKINS et al., 1997 Detection of numerous Y chromosome biallelic polymorphisms by denaturing high-performance liquid chromatography. Genome Res. 7: 996-1005.
    • (1997) Genome Res. , vol.7 , pp. 996-1005
    • Underhill, P.A.1    Jin, L.2    Lin, A.A.3    Mehdi, S.Q.4    Jenkins, T.5
  • 33
    • 0034892466 scopus 로고    scopus 로고
    • Identification and characterization of a novel locus controlling early fruit development in tomato
    • VAN DER KNAAP, E., and S. D. TANKSLEY, 2001 Identification and characterization of a novel locus controlling early fruit development in tomato. Theor. Appl. Genet. 103: 353-358.
    • (2001) Theor. Appl. Genet. , vol.103 , pp. 353-358
    • Van Der Knaap, E.1    Tanksley, S.D.2
  • 34
    • 0032745976 scopus 로고    scopus 로고
    • Three QTLs from Lycopersicon peruvianum confer a high level of resistance to Clavibacter michiganensis ssp. michiganensis
    • VAN HEUSDEN, A. W., M. KOORNNEEF, R. E. VOORRIPS, W. BRUGGEMANN, G. PET et al., 1999 Three QTLs from Lycopersicon peruvianum confer a high level of resistance to Clavibacter michiganensis ssp. michiganensis. Theor. Appl. Genet. 99: 1068-1074.
    • (1999) Theor. Appl. Genet. , vol.99 , pp. 1068-1074
    • Van Heusden, A.W.1    Koornneef, M.2    Voorrips, R.E.3    Bruggemann, W.4    Pet, G.5
  • 35
    • 0032864281 scopus 로고    scopus 로고
    • Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoids
    • WILSON, W. A., S. E. HARRINGTON, W. L. WOODMAN, M. LEE, M. E. SORRELLS et al., 1999 Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoids. Genetics 153: 453-473.
    • (1999) Genetics , vol.153 , pp. 453-473
    • Wilson, W.A.1    Harrington, S.E.2    Woodman, W.L.3    Lee, M.4    Sorrells, M.E.5
  • 36
    • 0037197981 scopus 로고    scopus 로고
    • Molecular characterization of meiotic recombination across the 140-kb multigenic a1-sh2 interval of maize
    • YAO, H., Q. ZHOU, J. LI, H. SMITH, M. YANDEAU et al., 2002 Molecular characterization of meiotic recombination across the 140-kb multigenic a1-sh2 interval of maize. Proc. Natl. Acad. Sci. USA 99: 6157-6162.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 6157-6162
    • Yao, H.1    Zhou, Q.2    Li, J.3    Smith, H.4    Yandeau, M.5
  • 37
    • 21444440867 scopus 로고    scopus 로고
    • High-resolution mapping on pachytene chromosomes and extended DNA fibers by fluorescence in-situ hybridisation
    • ZHONG, X., P. F. FRANSZ, E. J. VAN WENNEKES, P. ZABEL, A. VAN KAMMEN et al., 1996 High-resolution mapping on pachytene chromosomes and extended DNA fibers by fluorescence in-situ hybridisation. Plant Mol. Biol. Rep. 14: 232-242.
    • (1996) Plant Mol. Biol. Rep. , vol.14 , pp. 232-242
    • Zhong, X.1    Fransz, P.F.2    Van Wennekes, E.J.3    Zabel, P.4    Van Kammen, A.5
  • 38
    • 0032006668 scopus 로고    scopus 로고
    • FISH studies reveal the molecular and chromosomal organization of individual telomere domains in tomato
    • ZHONG, X., P. F. FRANSZ, J. WENNEKES-VAN EDEN, M. S. RAMANNA, A. VAN KAMMEN et al., 1998 FISH studies reveal the molecular and chromosomal organization of individual telomere domains in tomato. Plant J. 13: 507-517.
    • (1998) Plant J. , vol.13 , pp. 507-517
    • Zhong, X.1    Fransz, P.F.2    Wennekes-Van Eden, J.3    Ramanna, M.S.4    Van Kammen, A.5
  • 39
    • 0032910714 scopus 로고    scopus 로고
    • FISH to meiotic pachytene chromosomes of tomato locates the root-knot nematode resistance gene Mi-1 and the acid phosphatase gene Aps-1 near the junction of euchromatin and pericentromeric heterochromatin of chromosomes arms 6S and 6L, respectively
    • ZHONG, X., J. BODEAU, P. F. FRANSZ, V. M. WILLIAMSON, A. VAN KAMMEN et al., 1999 FISH to meiotic pachytene chromosomes of tomato locates the root-knot nematode resistance gene Mi-1 and the acid phosphatase gene Aps-1 near the junction of euchromatin and pericentromeric heterochromatin of chromosomes arms 6S and 6L, respectively. Theor. Appl. Genet. 98: 365-370.
    • (1999) Theor. Appl. Genet. , vol.98 , pp. 365-370
    • Zhong, X.1    Bodeau, J.2    Fransz, P.F.3    Williamson, V.M.4    Van Kammen, A.5


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