FISH to meiotic pachytene chromosomes of tomato locates the root-knot nematode resistance gene Mi-1 and the acid phosphatase gene APS-1 near the junction of euchromatin and pericentromeric heterochromatin of chromosome arms 6S and 6L, respectively

Theoretical and Applied Genetics

Volumn 98, Issue 3-4, 1999, Pages 365-370

  Zhong, X B ^a,c   Bodeau, J ^b   Fransz, P F ^a   Williamson, V M ^b   Van Kammen, A ^a   De Jong, J H ^a   Zabel, P ^a  

^a WAGENINGEN UNIVERSITY   (Netherlands)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Fluorescence in situ hybridisation FISH; Mi; Nematode resistance gent; Pachytene chromosomes; Tomato

Indexed keywords

ACID PHOSPHATASE; CHROMOSOME ANALYSIS; CYTOGENETICS; EUCHROMATIN; FLUORESCENCE IN SITU HYBRIDIZATION; GENETIC LINKAGE; HETEROCHROMATIN; MOLECULAR MAPPING; PACHYTENE; PEST RESISTANCE; RESISTANCE GENE; ROOT KNOT NEMATODE; TOMATO; YEAST ARTIFICIAL CHROMOSOME;

EID: 0032910714     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220051081     Document Type: Article

References (31)

1. Arumuganathan K, Earle ED (1991) Nuclear DNA content of some important plant species. Plant Mol Biol Rep 9:208-218
2. Bailey DM (1941) The seedling test methods for root-knot nematode resistance. Proc Am Soc Hortic Sci 38:573-575
3. Barham WS, Winstead NN (1957) Inheritance of resistance to root-knot nematodes. Tomato Genet Coop Rep 7:3
4. Bonnema G, Hontelez J, Verkerk R, Zhang YQ, Van Daelen R, Van Kammen A, Zabel P (1996) An improved method of partially digesting plant megabase DNA suitable for YAC cloning: application to the construction of a 5.5 genome equivalent YAC library of tomato. Plant J 9:125-133
5. Fransz PF, Alonso-Blanco C, Liharska TB, Peeters AJM, Zabel P, de Jong JH (1996) High resolution physical mapping in Arabidopsis thaliana and tomato by fluorescence in situ hybridisation to extended DNA fibres. Plant J 9:421-430
6. Fransz P, de Jong JH, Zabel P (1998) Preparation of extended DNA fibres for high resolution mapping by fluorescence in situ hybridization (FISH). In: Gelvin SB, Schilperoort RA, Verma DPS (eds) Plant molecular biology manual. 2nd Edition. G5, 1-8. Kluwer Academic Publ, Dordrecht. The Netherlands
7. Frazier WA, Dennett RK (1949) Isolation of Lycopersicon esculentum type tomato lines essentially homozygous resistant to root-knot nematode. Proc Am Soc Hortic Sci 5:225-236
8. Gilbert JC (1958) Some linkage studies with the Mi gene for resistance to root-knot nematodes. Rep Tomato Genet Coop 8:15-17
9. Gilbert JC, McGuire DC (1956) Inheritance of resistance to several root-knot nematode from Meloidogyne incognita in commercial type tomato. Proc Am Soc Hortic Sci 68:437-442
10. Ho JY, Weide R, Ma H, van Wordragen MF, Lambert KN, Koornneef M, Zabel P, Williamson VM (1992) The root-knot nematode resistance gene (Mi) in tomato: construction of a molecular linkage map and identification of dominant cDNA markers in resistant genotypes. Plant J 2:971-982
11. Kaloshian I, Yaghoobi J, Liharska TB, Hontelez J, Hanson D, Hogan P, Jesse T, Wijbrandi J, Vos P, Zabel P, Williamson VM (1998) Genetic and physical localisation of the root-knot nematode resistance locus Mi in tomato. Mol Gen Genet 257:376-385
12. Khush GS, Rick CM (1968) Cytogenetic analysis of the tomato genome by means of induced deficiencies. Chromosoma 23 : 452-484
13. Lambie El, Roeder GS (1986) Repression of meiotic crossing over by a centromere (Cen3) in Saccharomyces cerevisiae. Genetics 114:769-789
14. Liharska TB, Williamson VM (1997) Resistance to root-knot nematode in tomato: towards the molecular cloning of the Mi-I locus. In: Fenoll C, Ohl S, Grundler F (eds) Cellular and molecular basis for plant-nematode interactions. Kluwer Academic Publ, Dordrecht, The Netherlands, pp 191-200
15. Liharska TB, Hontelez J, Van Kammen A, Zabel P, Koornneef M (1997) Molecular mapping around the centromere of tomato chromosome 6 using irradiation-induced deletions. Theor Appl Genet 95:969-974
16. Milligan S, Bodeau J, Yaghoobi J, Kaloshian I, Zabel P, Williamson VM (1998) The root-knot nematode resistance gene Mi from tomato is a member of the leucine-zipper-nucleotide binding-leucine rich repeat family of plant genes. Plant Cell 10:1307-1319
17. Peterson DG, Price HJ, Johnson JS, Stack SM (1996) DNA content of heterochromatin and euchromatin in tomato (Lycopersicon esculentum pachytene chromosomes. Genome 39:77-82
18. Ramanna MS, Prakken R (1967) Structure of and homology between pachytene and somatic metaphase chromosomes of the tomato. Genetica 38:115-133
19. Rick CM, Fobes JA (1974) Association of an allozyme with nematodes resistance. Rep Tomato Great Coop 24:25
20. Roberts PA (1965) Difference in the behaviour of eu-and heterochromatin: crossing over. Nature 205:725-726
21. Sherman JD, Stack SM (1995) Two-dimensional spreads of synaptonemal complexes from solanaceous plants VI. High-resolution recombination nodule map for tomato (Lycopersicon esculentum. Genetics 141:683-708
22. Smith PG (1944) Embryo culture of a tomato species hybrid. Proc. Am Soc Hortic Sci 44:413-416
23. Tanksley SD, Ganal MW, Prince JP, de Vicente MC. Bonierbal MW, Broun P, Fulton TM, Giovannoni JJ, Grandillo S, Marti GB, Messeguer R, Miller JC, Miller L, Paterson AH, Pineda O, Roeder MS, Wing RA, Wu W, Young ND (1992) High density molecular linkage maps of tomato and potato genomes. Genetics 132:1141-1160
24. Van Wordragen MF, Weide RL, Liharska T, Van Der Steen A, Koornneef M, Zabel P (1994) Genetic and molecular organisation of the short arm and pericentromeric region of tomato chromosome 6. Euphytica 79:169-174
25. Van Wordragen MF, Weide RL, Coppoolse E, Koornneef M, Zabel P (1996) Tomato chromosome 6: a high resolution map of the long arm and construction of a composite integrated marker-order map. Theor Appl Genet 92:1065-1072
26. Van Wordragen MF, Shakya R, Verkerk R, Peytavis R, Van Kammen A, Zabel P (1998) Liposome-mediated transfer of YAC DNA to tobacco cells. In: Plant molecular biology manual. Kluwer Academic Publ, Dordrecht, The Netherlands, pp. A3, 1-15
27. Weide RL, Van Wordragen MF, Lankhorst RK, Verkerk R, Hanhart C, Liharska T, Pap E, Stam P, Zabel P, Koornneef M (1993) Integration of the classical and molecular linkage maps of tomato chromosome 6. Genetics 135:1175-1186
28. Williamson VM, Hussey RS (1996) Nematode pathogenesis and resistance in plants. Plant Cell 8:1735-1745
29. Woo SS, Jiang JM, Gill BS, Paterson AH, Wing RA (1994) Construction and characterization of a bacterial artificial chromosome library of Sorghum bicolor. Nucleic Acids Res 22:4922-4931
30. Zhong XB, de Jong JH, Zabel P (1996a) Preparation of tomato meiotic pachytene and mitotic metaphase chromosomes suitable for fluorescence in situ hybridisation (FISH). Chromosome Res 4:24-28
31. Zhong XB, Fransz PF, Wennekes-van Eden J, Zabel P, van Kammen A, de Jong JH (1996b) High resolution mapping by fluorescence in situ hybridisation to pachytene chromosomes and extended DNA fibres. Plant Mol Biol Rep 14:232-242