메뉴 건너뛰기




Volumn 25, Issue 1, 2004, Pages 19-24

Evaluation of DNA methylation in the human genome: Why examine it and what method to use

Author keywords

CpG; Methylation; Mutation; Tumor suppressor genes

Indexed keywords

5 METHYLCYTOSINE; BISULFITE; CYTOSINE; DNA; RESTRICTION ENDONUCLEASE; URACIL;

EID: 0842328495     PISSN: 03922936     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review
Times cited : (6)

References (36)
  • 2
    • 0028096611 scopus 로고
    • Frommer M. High sensitivity mapping of methylated cytosines
    • Clark S. J., Harrison J., Paul C. L.: "Frommer M. High sensitivity mapping of methylated cytosines". Nuc. Acid. Res., 1994, 22, 2990.
    • (1994) Nuc. Acid. Res. , vol.22 , pp. 2990
    • Clark, S.J.1    Harrison, J.2    Paul, C.L.3
  • 5
    • 0029985241 scopus 로고    scopus 로고
    • Multiple roles for DNA methylation in gametic imprinting
    • Neumann B., Barlow D. P.: "Multiple roles for DNA methylation in gametic imprinting". Curr. Opin. Genet. Develop., 1996, 6, 159.
    • (1996) Curr. Opin. Genet. Develop. , vol.6 , pp. 159
    • Neumann, B.1    Barlow, D.P.2
  • 6
    • 0029587022 scopus 로고
    • Gametic imprinting in mammals
    • Barlow D. P.: "Gametic imprinting in mammals". Science, 1995, 270, 1610.
    • (1995) Science , vol.270 , pp. 1610
    • Barlow, D.P.1
  • 7
    • 0034092009 scopus 로고    scopus 로고
    • DNA methylation: Past, present and future directions
    • Robertson K. D., Jones P. A.: "DNA methylation: past, present and future directions". Carcinogenesis, 2000, 21, 461.
    • (2000) Carcinogenesis , vol.21 , pp. 461
    • Robertson, K.D.1    Jones, P.A.2
  • 8
    • 0033010782 scopus 로고    scopus 로고
    • A new assay for the analysis of X-chromosome inactivation based on methylation-specific PCR
    • Kubota T., Nonoyama S., Tonoki H., Masumo M., Imaizumi Kojima M., Wakui K. et al.: "A new assay for the analysis of X-chromosome inactivation based on methylation-specific PCR". Hum. Genet. 1999, 104, 49.
    • (1999) Hum. Genet. , vol.104 , pp. 49
    • Kubota, T.1    Nonoyama, S.2    Tonoki, H.3    Masumo, M.4    Imaizumi Kojima, M.5    Wakui, K.6
  • 9
    • 0033959282 scopus 로고    scopus 로고
    • The role of DNA hypermethylation in human neoplasia
    • Toyota M., Issa J. P. J.: "The role of DNA hypermethylation in human neoplasia". Electrophoresis, 2000, 21, 329.
    • (2000) Electrophoresis , vol.21 , pp. 329
    • Toyota, M.1    Issa, J.P.J.2
  • 10
    • 0025145277 scopus 로고
    • 5-Methylcytosine as an endogenous mutagen in the human LDL receptor and p53 genes
    • Rideout W. M. I., Coetzee G. A., Olumi A. F., Jones P. A.: "5-Methylcytosine as an endogenous mutagen in the human LDL receptor and p53 genes". Science, 1990, 249, 1288.
    • (1990) Science , vol.249 , pp. 1288
    • Rideout, W.M.I.1    Coetzee, G.A.2    Olumi, A.F.3    Jones, P.A.4
  • 11
    • 0030778081 scopus 로고    scopus 로고
    • Cytosine methylation enhances DNA damage produced by groove binding and intercalating enediynes: Studies with experamicins A1 and C
    • Mathur P., Xu J., Dedon P. C.: "Cytosine methylation enhances DNA damage produced by groove binding and intercalating enediynes: studies with experamicins A1 and C". Biochemistry, 1997, 36, 14868.
    • (1997) Biochemistry , vol.36 , pp. 14868
    • Mathur, P.1    Xu, J.2    Dedon, P.C.3
  • 12
    • 0033562994 scopus 로고    scopus 로고
    • Methylation of the CD44 metastasis suppressor gene in human prostate cancer
    • Lou W., Krill D., Dhir R., Becich M. J., Dong J. T., Frierson H. F. et al.: "Methylation of the CD44 metastasis suppressor gene in human prostate cancer". Cancer Res., 1999, 59, 2329.
    • (1999) Cancer Res. , vol.59 , pp. 2329
    • Lou, W.1    Krill, D.2    Dhir, R.3    Becich, M.J.4    Dong, J.T.5    Frierson, H.F.6
  • 13
    • 0034692447 scopus 로고    scopus 로고
    • Hypermethylation of death-associated protein (DAP) kinase promoter and aggressiveness in stage I non-small-cell lung cancer
    • 200
    • Tang X., Khuri F. R., Lee J. J., Kemp B. L., Liu D., Hong W. K., Mao L.: "Hypermethylation of death-associated protein (DAP) kinase promoter and aggressiveness in stage I non-small-cell lung cancer". J. Natl. Cancer Inst., 200, 92, 1511.
    • J. Natl. Cancer Inst. , vol.92 , pp. 1511
    • Tang, X.1    Khuri, F.R.2    Lee, J.J.3    Kemp, B.L.4    Liu, D.5    Hong, W.K.6    Mao, L.7
  • 14
    • 0034109902 scopus 로고    scopus 로고
    • Epigenetic silencing of maspin gene expression in juman breast cancers
    • Domann F. E., Rice J. C., Hendrix M. J. C., Futscher B. W.: "Epigenetic silencing of maspin gene expression in juman breast cancers". Int. J. Cancer, 2000, 85, 805.
    • (2000) Int. J. Cancer , vol.85 , pp. 805
    • Domann, F.E.1    Rice, J.C.2    Hendrix, M.J.C.3    Futscher, B.W.4
  • 16
    • 0034666334 scopus 로고    scopus 로고
    • ink4a promoter hypermethylation, p53 mutation, and K-ras mutation in exfoliative material mark the development of lung cancer on symptomatic chronic smokers
    • ink4a promoter hypermethylation, p53 mutation, and K-ras mutation in exfoliative material mark the development of lung cancer on symptomatic chronic smokers". J. Clin. Oncol., 2000, 18, 3221.
    • (2000) J. Clin. Oncol. , vol.18 , pp. 3221
    • Kersting, M.1    Friedl, C.2    Kraus, A.3    Behn, M.4    Pankow, W.5    Schuerman, M.6
  • 17
    • 3242873113 scopus 로고
    • A simple high-resolution procedure to study DNA methylation an in vivo DBA-protien interaction on a single-copy gene level in higher eukaryotes
    • Saluz H., Jost J. P.: "A simple high-resolution procedure to study DNA methylation an in vivo DBA-protien interaction on a single-copy gene level in higher eukaryotes". Proc. Natl. Acad. Sciences, 1989, 86, 2602.
    • (1989) Proc. Natl. Acad. Sciences , vol.86 , pp. 2602
    • Saluz, H.1    Jost, J.P.2
  • 18
    • 0033397844 scopus 로고    scopus 로고
    • Identification of 5-methylcytosine in complex genomes
    • Thomassin H., Oakeley E. J., Grange T: "Identification of 5-methylcytosine in complex genomes". Methods, 1999, 19, 465.
    • (1999) Methods , vol.19 , pp. 465
    • Thomassin, H.1    Oakeley, E.J.2    Grange, T.3
  • 21
    • 0027400888 scopus 로고
    • Maternal-specific methylation of the imprinted mouse Igf2r locus identifies the expressed locus as carrying the imprinting signal
    • Stoger R., Kubicka P., Liu C. G., Kafri T., Razin A., Cedar H., Barlow D. P.: "Maternal-specific methylation of the imprinted mouse Igf2r locus identifies the expressed locus as carrying the imprinting signal". Cell, 1993, 73, 1827.
    • (1993) Cell , vol.73 , pp. 1827
    • Stoger, R.1    Kubicka, P.2    Liu, C.G.3    Kafri, T.4    Razin, A.5    Cedar, H.6    Barlow, D.P.7
  • 22
    • 85066367017 scopus 로고    scopus 로고
    • DAP-kinase CpG island methylation in acute myeloid leukemia: Methodology vs. biology?
    • Aggerholm A., Hokland P., Guldberg P.: "DAP-kinase CpG island methylation in acute myeloid leukemia: methodology vs. biology?". Blood, 2000, 95, 2997.
    • (2000) Blood , vol.95 , pp. 2997
    • Aggerholm, A.1    Hokland, P.2    Guldberg, P.3
  • 23
    • 1842292179 scopus 로고    scopus 로고
    • Use of a single sequencing termination reaction to distinguish between cytosine and 5-methylcytosine in bisulfite-modified DNA
    • Zhang X., Huang C. J., Nazarian R., Ritchie T., de Vellis J. S., Noble E. P.: "Use of a single sequencing termination reaction to distinguish between cytosine and 5-methylcytosine in bisulfite-modified DNA". Biotechniques, 1997, 22, 850.
    • (1997) Biotechniques , vol.22 , pp. 850
    • Zhang, X.1    Huang, C.J.2    Nazarian, R.3    Ritchie, T.4    De Vellis, J.S.5    Noble, E.P.6
  • 24
    • 0033556427 scopus 로고    scopus 로고
    • Extensive intr- and interindividual heterogeneity of p15INK4B methylation in acute myeloid leukemia
    • Aggerholm A., Guldberg P., Hokland M., Hokland P.: "Extensive intr- and interindividual heterogeneity of p15INK4B methylation in acute myeloid leukemia". Cancer Res., 1999, 59, 436.
    • (1999) Cancer Res. , vol.59 , pp. 436
    • Aggerholm, A.1    Guldberg, P.2    Hokland, M.3    Hokland, P.4
  • 25
    • 0033564351 scopus 로고    scopus 로고
    • Hypermethylation of the DAP-kinase CpG island is a common alteration in B-cell malignancies
    • Katzenellenbogen R. A., Baylin S. B., Herman J. G.: " Hypermethylation of the DAP-kinase CpG island is a common alteration in B-cell malignancies". Blood, 1999, 93, 4347.
    • (1999) Blood , vol.93 , pp. 4347
    • Katzenellenbogen, R.A.1    Baylin, S.B.2    Herman, J.G.3
  • 26
    • 0005010050 scopus 로고    scopus 로고
    • DAP-kinase methylation: Methodology and biology
    • Herman J. G.: "DAP-kinase methylation: methodology and biology". Blood, 2000, 95, 2998.
    • (2000) Blood , vol.95 , pp. 2998
    • Herman, J.G.1
  • 27
    • 0026583975 scopus 로고
    • Repression of genes by DNA methylation depends on CpG density and promoter strenght: Evidense for involvement of methyl-CpG binding
    • Boyes J., Bird A.: "Repression of genes by DNA methylation depends on CpG density and promoter strenght: evidense for involvement of methyl-CpG binding". EMBO J., 1992, 11, 327.
    • (1992) EMBO J. , vol.11 , pp. 327
    • Boyes, J.1    Bird, A.2
  • 28
    • 13144266670 scopus 로고    scopus 로고
    • Incidence and functional consequences of hMLH1 promoter hypermethylation in colorectal carcinoma
    • Herman J. G., Umar A., Polyak K., Graff J. R., Ahuja N., Issa J. P. J. et al.: "Incidence and functional consequences of hMLH1 promoter hypermethylation in colorectal carcinoma". Proc. Natl. Acad. Sci. USA, 1998, 95, 6870.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 6870
    • Herman, J.G.1    Umar, A.2    Polyak, K.3    Graff, J.R.4    Ahuja, N.5    Issa, J.P.J.6
  • 29
    • 0033991527 scopus 로고    scopus 로고
    • Methylation of the hMLH1 promoter in familial gastric cancer with microsatellite instability
    • Yanagisawa Y., Akiyama Y., Iida S., Ito E., Nomizu T., Sugihara K. et al.: "Methylation of the hMLH1 promoter in familial gastric cancer with microsatellite instability". Int. J. Cancer, 2000, 85, 50.
    • (2000) Int. J. Cancer , vol.85 , pp. 50
    • Yanagisawa, Y.1    Akiyama, Y.2    Iida, S.3    Ito, E.4    Nomizu, T.5    Sugihara, K.6
  • 33
    • 0141962933 scopus 로고    scopus 로고
    • Mismatch repair gene expression defects contribute to microsatellite instability in ovarian cancer
    • in press
    • Geisler J. P., Sood A. L., Holmes R. J., Hatterman-Zogg M. A., Rathe J. A., Buller R. E.: "Mismatch repair gene expression defects contribute to microsatellite instability in ovarian cancer". Cancer (in press), 2003.
    • (2003) Cancer
    • Geisler, J.P.1    Sood, A.L.2    Holmes, R.J.3    Hatterman-Zogg, M.A.4    Rathe, J.A.5    Buller, R.E.6
  • 34
    • 0034176798 scopus 로고    scopus 로고
    • DNA hypermethylation in tumorigenesis: Epigenetics joins genetics
    • Baylin S. B., Herman J. G.: "DNA hypermethylation in tumorigenesis: epigenetics joins genetics". Trends Genet., 2000, 16, 168.
    • (2000) Trends Genet. , vol.16 , pp. 168
    • Baylin, S.B.1    Herman, J.G.2
  • 36
    • 0033105363 scopus 로고    scopus 로고
    • Hypermethylation of the hMLH1 gene promoter in juman gastric cancers with microsatellite instability
    • Fleisher A. S., Esteller M., Wang S., Tamura G., Suzuki H., Yin J. et al.: "Hypermethylation of the hMLH1 gene promoter in juman gastric cancers with microsatellite instability". Cancer Res., 1999, 59, 1090.
    • (1999) Cancer Res. , vol.59 , pp. 1090
    • Fleisher, A.S.1    Esteller, M.2    Wang, S.3    Tamura, G.4    Suzuki, H.5    Yin, J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.