Molecular DNA Markers in Phylogeny and Systematics

Russian Journal of Genetics

Volumn 38, Issue 8, 2002, Pages 851-868

  Grechko, V V ^a  

^a ENGELHARDT INSTITUTE OF MOLECULAR BIOLOGY   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0347607373     PISSN: 10227954     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1016890509443     Document Type: Review

References (120)

1. Mayr, E., Animal Species and Evolution, Cambridge: Belknap, 1963.
2. Schmid, C.W., Does SINE Evolution Preclude Alu Function?, Nucleic Acids Res., 1998, vol. 26, pp. 4541-4550.
3. Ryskov, A.P., Multilocus DNA Fingerprinting in Population Genetic Studies of Biodiversity, Mol. Biol. (Moscow), 1999, vol. 33, no. 6, pp. 997-1011.
4. Sverdlov, E.D., The Microcosm of the Genome, Mol. Biol. (Moscow), 1999, vol. 33, no. 6, pp. 917-940.
5. Kupriyanova, N.S., Conservation and Variation of Eukaryotic Ribosomal DNA, Mol. Biol. (Moscow), 2000, vol. 34, no. 5, pp. 753-767.
6. Antonov, A.S., Osnovy genosistematiki rastenii (Basics of Plant Genosystematics), Moscow: MAIK "Nauka/Interperiodica," 2000.
7. Debabov, V.G., Bacterial Life Outside Laboratories, Mol. Biol. (Moscow), 1999, vol. 33, no. 6, pp. 1074-1084.
8. Pesenko, Yu.A., Methodical Analysis of the Taxonomy: I. Formulation of the Problem, Major Taxonomic Schools, Printsipy i metody zoologicheskoi sistematiki (Principles and Methods of Zoological Systematics), Borkin, L.Ya., Ed., Akad. Nauk SSSR, 1989, vol. 206, pp. 8-119.
9. Emel'yanov, A.F. and Rasnitsin, A.P., Systematics, Phylogeny, Cladistics, Priroda, 1991, no. 7, pp. 26-37.
10. Vorontsov, N.N., Razvitie evolyutsionnykh idei v biologii (Development of Evolutionary Ideas in Biology), Moscow: Progress-Traditsiya, 1999.
11. Molecular Systematics, Hillis, D.M., Moritz, C., and Mable, B.K., Eds., Sunderland, Mass.: Sinauer, 1996.
12. Hillis, D.M., Molecular versus Morphological Approach to Systematics, Annu. Rev. Ecol. Syst., 1987, vol. 18, pp. 23-42.
13. Huelsenbeck, J.P. and Nielsen, R., Variation in the Pattern of Nucleotide Substitution across Sites, J. Mol. Evol., 1999, vol. 48, pp. 86-93.
14. Purvis, A. and Quicke, D.L.J., Building Phylogenies: Are the Big Easy?, Trends Ecol. Evol., 1997, vol. 12, pp. 49-50.
15. DeJong, W.W., Molecular Remodel the Mammalian Tree, Trends Ecol. Evol., 1998, vol. 13, pp. 203-207.
16. Forterre, P. and Phillipe, H., Where Is the Root for the Universal Tree of Life, BioEssays, 1999, vol. 21, pp. 871-879.
17. Adoutte, A., Balavoine, G., Lartillot, N., and de Rosa, R., The End of Intermedia Taxa?, Anim. Evol., 1999, vol. 15, pp. 104-108.
18. Philippe, H. and Laurent, J., How Good Are Phylogenetic Trees? Curr. Opin. Genet. Dev., 1998, vol. 8, pp. 616-623.
19. Ayala, F.J., Vagaries of the Molecular Clock, Proc. Natl. Acad. Sci. USA, 1997, vol. 94, pp. 7776-7783.
20. Wolfe, K.H. and Shields, D.C., Molecular Evidence for an Ancient Duplication of the Entire Yeast Genome, Nature, 1997, vol. 387, pp. 708-713.
21. Kordis, D. and Gubensek, F., Unusual Horizontal Transfer of a Long Interspersed Nuclear Element between Distant Vertebrate Classes, Proc. Natl. Acad. Sci. USA, 1998, vol. 95, pp. 10 704-10 709.
22. Avise, J.C., Molecular Markers, Natural History, and Evolution, New York: Chapman & Hall, 1994.
23. Gerbi, S.A., Evolution of Ribosomal DNA, Molecular Evolution and Genetics, MacIntyre, R.J., Ed., New York: Plenum, 1985, pp. 419-517.
24. Aleshin, V.V., Vladycheskaya, N.S., Kedrova, O.S., et al., Comparison of the 18S rRNA Genes in the Invertebrate Phylogeny, Mol. Biol. (Moscow), 1995, vol. 29, no. 6, pp. 1408-1426.
25. Pennisi, E., Genome Data Shake Tree of Life, Science, 1998, vol. 280, pp. 672-674.
26. Wainwright, P.O., Hinkle, G., Sogin, M.L., and Stickel, S.K., Monophyletic Origins of the Metazoa: An Evolutionary Link with Fungi, Science, 1993, vol. 260, pp. 340-342.
27. Aquinaldo, A.M., Turbeville, J.M., Linford, L.S., et al., Evidence for a Clade of Nematodes, Arthropods and Other Molting Animals, Nature, 1997, vol. 387, pp. 489-493.
28. Tetushkin, E.Ya., Molecular Paleogenetics of Primates, Genetika (Moscow), 1997, vol. 33, no. 3, pp. 293-307.
29. Pawlowski, J., Bolinar, I., Fahrni, J.F., et al., Extreme Differences in Rates of Molecular Evolution of Foraminifera Revealed by Comparison of Ribosomal DNA Sequences and the Fossil Record, Mol. Biol. Evol., 1997, vol. 14, pp. 498-505.
30. Bruno, W.J., Socci, N.D., and Halpern, A.L., Weighted Neighbor Joining: A Likelihood-Based Approach to Distance-Based Phylogeny Reconstruction, Mol. Biol. Evol., 2000, vol. 17, pp. 189-197.
31. Hwang, U.W., Kim, W., Tautz, D., and Friedrich, M., Molecular Phylogenetics at the Felsenstein Zone: Approaching the Strepsiptera Problem Using 5.8S and 28S rDNA Sequences, Mol. Phyl. Evol., 1998, vol. 9, pp. 470-480.
32. Yang, Z., How Often Do Wrong Models Produce Better Phytogenies? Mol. Biol. Evol., 1997, vol. 144, pp. 105-108.
33. Stiller, J.W. and Hall, B.D., Long-Branch Attraction and the rDNA Model of Early Eukaryotic Evolution, Mol. Biol. Evol., 1999, vol. 16, pp. 1270-1279.
34. Khesin, R.B., Nepostoyanstvo genoma (Genome Instability), Moscow: Nauka, 1984.
35. Kurland, C.G., Something for Everyone: Horizontal Gene Transfer in Evolution, EMBO Rep., 2000, vol. 1 pp. 92-95.
36. Xu', S., Phylogenetic Analysis under Reticulate Evolution, Mol. Biol. Evol., 2000, vol. 17, pp. 897-907.
37. Andronico, F., De Lucchini, S., Graziani, F., et al., Molecular Organization of Ribosomal RNA Genes Clusters at Variable Chromosomal Sites in Triturus vulgaris meridionalis (Amphibia, Urodela), J. Mol. Biol., 1985, vol. 186, pp. 219-229.
38. Wellems, T.E., Walliker, D., Smith, C.L., et al., Histidine-Rich Protein Gene Marks a Linkage Group Favored Strongly in a Genetic Cross of Plasmodium viviparum, Cell (Cambridge, Mass.), 1987, vol. 49, pp. 633-642.
39. Cumming, M.P., Otto, S.P., and Wakeley, J., Sampling Properties of DNA Sequence Data in Phylogenetic Studies, Mol. Biol. Evol., 1995, vol. 12, pp. 814-822.
40. Wallis, G.P., Do Animal Mitochondrial Genomes Recombine?, Trends Ecol. Evol., 1999, vol. 14, pp. 209-210.
41. Sheldon, F.E., Jones, C.E., and McCracken, K.G., Relative Pattern and Rates of Evolution in Heron Nuclear and Mitochondrial DNA, Mol. Biol. Evol., 2000, vol. 17, pp. 437-450.
42. Arnason, U., Gullberg, A., Gretarsdottir, S., et al., The Mitochondrial Genome of the Sperm Whale and a New Molecular Reference for Estimating Eutherian Divergence Dates, J. Mol. Evol., 2000, vol. 50, pp. 569-578.
43. Avise, J.C. and Walker, D., Species Realities and Numbers in Sexual Vertebrates: Perspectives from Asexually Transmitted Genome, Proc. Natl. Acad. Sci. USA, 1999, vol. 96, pp. 992-995.
44. Hedges, S.B., Molecular Evidence for the Origin of Birds, Proc. Natl. Acad. Sci. USA, 1994, vol. 91, pp. 2621-2624.
45. Heise, P.J., Maxson, L.R., Dowling, H.G., and Hedges, S.B., Higher-Level Snake Phylogeny Inferred from mtDNA Sequences of 12S rRNA and 16S rRNA Genes, Mol. Biol. Evol., 1995, vol. 12, pp. 259-265.
46. Boor, J.L. and Brown, W.M., Mitochondrial Genomes of Galathealinum, Helobdella, and Platynereis: Sequences and Gene Arrangement Comparisons Indicate That Pogonophora Is Not a Phylum and Annelida and Arthropoda Are Not Sister Taxa, Mol. Biol. Evol., 2000, vol. 17, pp. 87-106.
47. Macey, J.R., Larson, A., Ananjeva, N.B., and Papenfus, T.J., Evolutionary Shifts in Three Major Structural Features of the Mitochondrial Genome among Iguanian Lizards, J. Mol. Evol., 1997, vol. 44, pp. 660-674.
48. Le, T.H., Blair, D., Agatsuma, T., et al., Phylogenies Inferred from Mitochondrial Gene Orders: A Cautionary Tale from the Parasitic Flatworms, Mol. Biol. Evol., 2000, vol. 17, pp. 1123-1125.
49. Hickerson, M.J. and Canningham, C.W., Dramatic Mitochondrial Gene Rearrangement in the Hermit Crab Pagurus longicarpus (Crustacea, Anomura), Mol. Biol. Evol., 2000, vol. 17, pp. 634-644.
50. Moritz, C., Dowling, T.E., and Brown, W.M., Evolution of Animal mtDNA: Relevance for Population Biology and Systematics, Annu. Rev. Ecol. Syst., 1987, vol. 18, pp. 269-292.
51. Kumasawa, Y. and Nishida, M., Complete Mitochondrial DNA Sequence of the Green Turtle and Blue-Tailed Mole Skink: Statistical Evidence for Archosaurian Affinity of Turtles, Mol. Biol. Evol., 1999, vol. 16, pp. 784-792.
52. D'Erchia, A., Gissi, G., Persole, G., et al., The Guinea Pig Is Not a Rodent, Nature, 1996, vol. 381, pp. 597-600.
53. Slobodyanyuk, S.Ya., Kirilchik, S.V., Pavlova, M.E., et al., The Evolutionary Relationships of Two Families of Cottoid Fishes of Lake Baikal (East Siberia) as Suggested by Analysis of Mitochondrial DNA, J. Mol. Evol., 1995, vol. 40, pp. 392-399.
54. Fu, J., Toward the Phylogeny of the Family Lacertidae: Implication from Mitochondrial DNA 12S and 16S Gene Sequences (Reptilia: Squamata), Mol. Phylogenet. Evol., 1998, vol. 9, pp. 118-130.
55. Buntjer, J.B. and Lenstra, J.A., Phylogeny within Families Deduced from Interspersed Repeat PCR Fingerprints, in DNA Repeats in Vertebrate Genome as Probes in Phylogeny and Species Identification, Utrecht: Univ. of Utrecht, 1997, pp. 25-38.
56. Eyre-Walker, A., Evolutionary Genomics, Trends Ecol. Evol., 1999, vol. 14, p. 176.
57. Rand, D., Mitochondrial Genomics Flies High, Trends Ecol. Evol., 2001, vol. 16, pp. 2-4.
58. Sorhannus, U. and Fox, M., Synonymous and Nonsynonymous Substitution Rates in Diatoms: A Comparison between Chloroplast and Nuclear Genes, J. Mol. Evol., 1999, vol. 48, pp. 209-212.
59. Nunn, G.B. and Stanley, S.E., Body Size Effects and Rates of Cytochrome B Evolution in Tube-Nosed Seabirds, Mol. Biol. Evol., 1998, vol. 15, pp. 1360-1371.
60. Hurai, S., Hayasaka, K., Kondo, R., et al., Recent African Origin of Modern Humans Revealed by Complete Sequences of Hominid mtDNA, Proc. Natl. Acad. Sci. USA, 1995, vol. 92, pp. 532-536.
61. Gissi, C., Reyes, A., Pesole, G., and Saccone, C., Linkage-Specific Evolutionary Rate in Mammalian mtDNA, Mol. Biol. Evol., 2000, vol. 17, pp. 1022-1031.
62. Mundy, N.I., Pissinatti, A., and Woodruff, D.S., Multiple Nuclear Insertion of Mitochondrial Cytochrome B Sequence in Callitrichine Primates, Mol. Biol. Evol., 2000, vol. 17, pp. 1075-1080.
63. Garsia-Machado, E., Pempera, M., Donnebony, N., et al., Mitochondrial Genes Collectively Suggest the Paraphyly of Crustacea with Respect to Insecta, J. Mol. Evol., 1999, vol. 49, pp. 142-149.
64. Grechko, V.V., Ryabinin, D.M., Fedorova, L.V., et al., Molecular Genetic Classification and Phylogenetic Relationships of Several Lizard Species of the Family Lacertidae as Evident from the Analysis of Specific Restriction Site Distribution in DNA Repeats (Taxono-printing), Mol. Biol. (Moscow), 1998, vol. 32, no. 1, pp. 172-183.
65. Schierwater, B., Arbitrarily Amplified DNA in Systematics and Phylogenetics, Electrophoresis (Weinheim, Fed. Repub. Ger.), 1995, vol. 16, pp. 1643-1647.
66. Espinasa, L. and Borowsky, R., Evolutionary Divergence of AP-PCR (RAPD) Patterns, Mol. Biol. Evol., 1998, vol. 15, pp. 408-414.
67. Ryabinina, N.L., Grechko, V.V., and Darevsky, I.S., DNA Polymorphism in Lizard Populations of the Family Lacertidae, as Revealed by RAPD Analysis, Genetika (Moscow), 1998, vol. 34, no. 12, pp. 1661-1667.
68. Grechko, V.V., Fedorova, L.V., Fedorov, A.N., et al., Restriction Mapping of Highly Repetitive DNA Sequences in Studies of the Genetic Relationships in Lower Animal Taxa, Mol. Biol. (Moscow), 1997, vol. 31, no. 2, pp. 256-264.
69. Rabouam, C., Comes, A.M., Bretagnolle, V., et al., Futures of DNA Fragments Obtained by Random Amplified Polymorphic DNA (RAPD) Assays, Mol. Ecol., 1999, vol. 8, pp. 493-503.
70. Fukatsu, T. and Ishikawa, H., Differentiation of Aphid Clones by Arbitrary Primed Polymerase Chain Reaction (AP-PAR) DNA Fingerprinting, J. Mol. Evol., 1994, vol. 3, pp. 187-192.
71. Ellegren, H. and Sheldon, B., New Tools for Sex Identification and the Study of Sex Allocation in Birds, Trends Ecol. Evol., 1997, vol. 12, pp. 255-259.
72. Chobanu, D.G., Rudykh, I.A., Ryabinina, N.L., et al., Reticulate Evolution of Parthenogenetic Rock Lizard Species of the Family Lacertidae: Inheritance of CLSat Tandem Repeats and Anonymous RAPD Markers, Mol. Biol. (Moscow), 2002, vol. 36, no. 2, pp. 296-306.
73. Khrisanfova, G.G., Semenova, S.K., and Ryskov, A.P., Cloning and Characterization of RAPD Genome Markers in Parasitic Nematodes Trichinella spiralis and T. pseudospiralis, Mol. Biol. (Moscow), 2000, vol. 34, no. 5, pp. 828-833.
74. Gilbert, M. and Labuda, D., CORE-SINEs: Eukaryotic Short Interspersed Retroposing Elements with Common Sequence Motifs, Proc. Natl. Acad. Sci. USA, 1999, vol. 96, pp. 2869-2874.
75. Singer, M.F., SINEs and LINEs: Highly Repeated Short and Long Interspersed Sequences in Mammalian Genomes, Cell (Cambridge, Mass.), 1982, vol. 28, pp. 433-434.
76. Doolittle, W.F. and Sapienza, C., Selfish Genes, the Phenotype Paradigm and Genome Evolution, Nature, 1980, vol. 284, pp. 601-603.
77. Orgel, L.E. and Crick, F.H.C., Selfish DNA: The Ultimate Parasite, Nature, 1981, vol. 284, pp. 604-607.
78. Kramerov, D.A., Major Repetitive Elements of the Mouse Genome, Doctoral (Biol.) Dissertation, Moscow, 1987.
79. Hillis, D.M., SINE of the Perfect Character, Proc. Natl. Acad. Sci. USA, 1999, vol. 96, pp. 9979-9981.
80. Hughes, D.S., MIRs as of Mammalian Gene Evolution, Trends Genet., 2000, vol. 16, pp. 60-62.
81. Serdobova, I.M. and Kramerov, D.A., Short Retroposons of the B2 Superfamily: Evolution and Application for the Study of Rodent Phylogeny, J. Mol. Evol., 1998, vol. 46, pp. 202-214.
82. Kass, D.H., Raynas, M.E., and Williams, T.M., Evolutionary History of B1 Retroposons in the Genus Mus, J. Mol. Evol., 2000, vol. 51, pp. 256-264.
83. Sietkiewicz, E., Richter, C., and Labuda, D., Phylogenetic Affinities of Tarsier in the Context of Primate Alu. Repeats, Mol. Phyl. Evol., 1998, vol. 11, pp. 77-83.
84. Blinov, V.M., Denisov, S.I., Saraev, D.V., et al., Structural Organization of the Human Genome: Distributions of Nucleotides, Alu Repeats, and Exons in Chromosomes 21 and 22, Mol. Biol. (Moscow), 2001, vol. 35, no. 6, pp. 1032-1038.
85. Armour, J.A.L., Monckton, D.G., Neil, D.L., et al., Mechanisms of Mutation at Human Minisatellite Loci, Genome Analysis, vol. 7: Genome Arrangement and Stability, Cold Spring Harbor, New York: Cold Spring Harbor Lab., 1993, pp. 43-57.
86. Moyzis, R.K., Buckingham, J.M., Cram, L.S., et al., A Highly Conserved DNA Sequence Presented at the Telomeres of Human Chromosomes, Proc. Natl. Acad. Sci. USA, 1988, vol. 85, pp. 6622-6626.
87. Grady, D.L., Rateiff, R.L., Robinson, D.L., et al., Highly Conserved Repetitive DNA Sequences Are Present at Human Centromeres, Proc. Natl. Acad. Sci. USA, 1992, vol. 89, pp. 1695-1696.
88. Miclos, G.L.G., Localized Highly Repetitive DNA Sequences in Vertebrate and Invertebrate Genome, Molecular Evolutionary Genetics, McIntyre, R.J., Ed., New York: Plenum, 1985, pp. 241-321.
89. Beridze, T.G., Satellitnye DNK (Satellite DNA), Moscow: Nauka, 1982.
90. Elder, J.F. and Turner, B.J., Concerted Evolution of the Population Level: Pupfish HindIII Satellite DNA Sequences, Proc. Natl. Acad. Sci. USA, 1994, vol. 91, pp. 994-998.
91. Varley, J.M., Macgregor, H.C., and Barnett, L., Characterization of a Short Highly Repeated and Centromerically Localized DNA Sequences in the Crested and Marbled Newts of the Genus Triturus, Chromosoma, 1990, vol. 100, pp. 15-31.
92. Lorite, P., Palomeque, T., Garneria, I., and Petitpierre, E., Characterization and Chromosome Location of Satellite DNA in the Leaf Beetle Chrysolina americana (Coleoptera, Chrysomelidae), Genetica (The Hague), 2001, vol. 110, pp. 143-150.
93. Castagnone-Sereno, P., Leroy, H., Semblat, J.-P., et al., Unusual and Strongly Structured Sequence Variation in a Complex Satellite DNA Family from the Nematode Meliodogine chitwoodi, J. Mol. Biol., 1998, vol. 46, pp. 225-233.
94. Mednikov, B.M., Bannikova, A.A., Lomov, A.A., et al., Restriction Enzyme Analysis of Nuclear Repetitive DNA, the Criteria of Species, and the Mechanism of Speciation, Mol. Biol. (Moscow), 1995, vol. 29, pp. 1308-1319.
95. Garrido-Ramos, M.A., de Herran, R., Jamilena, M., et al., Evolution of Centromeric Satellite DNA and Its Use in Phylogenetic Studies of the Sparide Family (Pisces, Perciformes), Mol. Phyl. Evol., 1999, vol. 12, pp. 200-204.
96. Goodier, J.L. and Davidson, W.S., Characterization of Novel Minisatellite Repeat Loci in Atlantic Salmon (Salmo salar) and Their Phylogenetic Distribution, J. Mol. Evol., 1998, vol. 46, pp. 245-255.
97. Vignali, R., Rijili, F.M., Batistoni, R., et al., The Dispersed Highly Repeated DNA Families of Truturus vulgaris meridionales (Amphibia, Urodela) Are Widely Conserved among Salamandridae, Chromosoma, 1991, vol. 100, pp. 87-96.
98. Olmo, E., Odierna, G., and Capriglione, T., The Karyology of Mediterranean Lacertidae Lizards, Lacertid of the Mediterranean Region, Valakas, E.D., Bohme, W., Rerer-Mellado, V., and Maragou, P., Eds., Athens: Alicante, 1993, pp. 61-84.
99. Kozlova, S.V., Elisafenko, E.A., Mazurok, N.A., and Zakiyan, S.M., Genome Organization and Chromosomal Localization of New Repeat MS7 Specific to Sex-Chromosomal Heterochromatin in Vole of the arvalis Group of the Genus Microtus, Mol. Biol. (Moscow), 2001, vol. 35, no. 5, pp. 792-797.
100. Potapov, S.G., Diagnostic Potentialities of Molecular Genetic Markers in Mammalian Systematics, Cand. Sci. (Biol.) Dissertation, Moscow, 1998.
101. Shevchenko, A.N., Slobodyanyuk, S.Ya., and Zakiyan, S.M., Analysis of the Variation of Repetitive DNA Sequences in Four Common Vole Species, Mol. Biol. (Moscow), 1999, vol. 33, no. 4, pp. 700-705.
102. Modi, W.S., Gallagher, D.S., and Womack, J.E., Evolutionary Histories of Highly Repeated DNA Families among the Artiodactyla (Mammalia), J. Mol. Evol., 1996, vol. 42, pp. 337-349.
103. Blake, R.D., Wang, J.Z., and Bauregard, L., Repetitive Sequence Families in Alces alces americana, J. Mol. Evol., 1997, vol. 44, pp. 509-520.
104. Milinkovitch, M.C., Molecular Phylogeny of Cetaceans Prompts Revision of Morphological Transformation, Trends Ecol. Evol., 1995, vol. 10, pp. 328-334.
105. Seymour, J., DNA Tells of Species Links by Repeating Itself, Ecos, 1982, no. 30, pp. 21-23.
106. Mullenbach, R., Lutz, S., Holzmann, K., et al., A Non-Alphoid Repetitive DNA Sequence from Human Chromosome 21, Hum. Genet., 1992, vol. 89, pp. 519-523.
107. Alves, G., Seuanez, H.M., and Fanning, T., A Clade of a New World Primates with Distinctive Alphoid Satellite DNAs, Mol. Phyl. Evol., 1997, vol. 9, pp. 220-224.
108. Trifonov, E.N., Tuning Function of Tandem Repeating Sequences: A Molecular Device for Fast Adaptation, Proc. Int. Conf. Evol. Genomics, Costa Rica, 1999, p. 74.
109. Dimitri, P. and Junakovic, N., Revising the Selfish DNA Hypothesis: New Evidence on Accumulation of Transposable Elements in Heterochromatin, Trends. Genet., 1999, vol. 15, pp. 123-124.
110. Martinez-Balbas, A., Rodriguez-Campos, A., Garcia-Ramirez, M., et al., Satellite DNA Contain Sequences That Induce Curvature, Biochemistry, 1990, vol. 29, pp. 2342-2348.
111. Constanzo, G., De Muiro, E., Salina, G., and Negri, R., Attraction Phasing and Neighbor Effects of Histone Octamer on Curved DNA, J. Mol. Biol., 1990, vol. 216, pp. 363-374.
112. Romanova, L.Y., Deriagin, G.V., and Mashkova, T.D., Evidence for Selection in Evolution of α-Satellite DNA: The Central Role of CENP-B/pJ Binding Region, J. Mol. Biol., 1996, vol. 261, pp. 334-340.
113. Warburton, P.E., Waye, J.S., and Willard, H.F., Nonrandom Localization of Recombination Events in Human α-Satellite Repeat Unit Variants: Implications for Higher Orders Structural Characteristics within Centromeric Heterochromatin, Mol. Cell. Biol., 1993, vol. 13, pp. 6520-6529.
114. Larin, Z., Fricker, M.D., and Tyler-Smith, C., De Novo Formation of Several Features of a Centromere Following Induction of a Y Alphoid YAC into Mammalian Cells, Hum. Mol. Genet., 1994, vol. 3, pp. 689-695.
115. Capriglione, T., DeSanto, M.G., Odierna, G., and Olmo, E., An Alphoid-like Satellite DNA Sequence Is Present in the Genome of a Lacertid Lizards, J. Mol. Evol., 1998, vol. 46, pp. 240-244.
116. Slamovits, L.H., Cook, J.A., Lessa, E.P., and Rossi, M.S., Recurrent Amplifications and Deletions of Satellite DNA Accompanied Chromosomal Diversification in South American Tuco-Tucos (Genus Ctenomys, Rodentia: Octodontidae): A Phylogenetic Approach, Mol. Biol. Evol., 2001, vol. 18, pp. 1708-1719.
117. Saitoh, Y., Miyamoto, N., Okada, T., et al., The RS447 Human Megasatellite Tandem Repetitive Sequence Encodes a Novel Deubiquitinating Enzyme with Functional Promoter, Genomics, 2000, vol. 67, pp. 291-300.
118. Plohl, M., Mistrovic, N., Bruvo, B., and Ugarkovic, D., Similarity of Structural Features and Evolution of Satellite DNAs from Palorus subdepressus (Coleoptera) and Related Species, J. Mol. Evol., 1998, vol. 46, pp. 234-239.
119. Kipling, D. and Warburton, P.E., Centromeres, CENP-B and Tigger Too, Trends Genet., 1997, vol. 13, pp. 141-145.
120. Fedorov, A.N., Fedorova, L.V., Grechko, V.V., et al., Variable and Invariable DNA Repeats Characters Revealed by Taxonoprint Approach Are Useful for Molecular Systematics, J. Mol. Evol., 1999, vol. 48, pp. 69-76.