-
1
-
-
0031031958
-
Kinetic measurement of the step size of DNA unwinding by Escherichia coli UvrD helicase
-
Ali, J. A., and T. M. Lohman. 1997. Kinetic measurement of the step size of DNA unwinding by Escherichia coli UvrD helicase. Science. 275:377-380.
-
(1997)
Science
, vol.275
, pp. 377-380
-
-
Ali, J.A.1
Lohman, T.M.2
-
2
-
-
0033527761
-
An oligomeric form of E. coli UvrD is required for optimal helicase activity
-
Ali, J. A., N. K. Maluf, and T. M. Lohman. 1999. An oligomeric form of E. coli UvrD is required for optimal helicase activity. J. Mol. Biol. 293:815-833.
-
(1999)
J. Mol. Biol.
, vol.293
, pp. 815-833
-
-
Ali, J.A.1
Maluf, N.K.2
Lohman, T.M.3
-
3
-
-
0019888063
-
Complexes of Rep protein with ATP and DNA as a basis for helicase action
-
Arai, N., K. I. Arai, and A. Kornberg. 1981. Complexes of Rep protein with ATP and DNA as a basis for helicase action. J. Biol. Chem. 256:5287-5293.
-
(1981)
J. Biol. Chem.
, vol.256
, pp. 5287-5293
-
-
Arai, N.1
Arai, K.I.2
Kornberg, A.3
-
4
-
-
0020740241
-
Analysis of numerical methods for computer simulation of kinetic processes: Development of KINSIM - A flexible, portable system
-
Barshop, B. A., R. F. Wrenn, and C. Frieden. 1983. Analysis of numerical methods for computer simulation of kinetic processes: development of KINSIM - a flexible, portable system. Anal. Biochem. 130:134-145.
-
(1983)
Anal. Biochem.
, vol.130
, pp. 134-145
-
-
Barshop, B.A.1
Wrenn, R.F.2
Frieden, C.3
-
5
-
-
0035905687
-
Processive translocation and DNA unwinding by individual RecBCD enzyme molecules
-
Bianco, P. R., L. R. Brewer, M. Corzett, R. Balhorn, Y. Yeh, S. C. Kowalczykowski, and R. J. Baskin. 2001. Processive translocation and DNA unwinding by individual RecBCD enzyme molecules. Nature. 409:374-378.
-
(2001)
Nature
, vol.409
, pp. 374-378
-
-
Bianco, P.R.1
Brewer, L.R.2
Corzett, M.3
Balhorn, R.4
Yeh, Y.5
Kowalczykowski, S.C.6
Baskin, R.J.7
-
6
-
-
0034682407
-
Translocation step size and mechanism of the RecBC DNA helicase
-
Bianco, P. R., and S. C. Kowalczykowski. 2000. Translocation step size and mechanism of the RecBC DNA helicase. Nature. 405:368-372.
-
(2000)
Nature
, vol.405
, pp. 368-372
-
-
Bianco, P.R.1
Kowalczykowski, S.C.2
-
7
-
-
0028138413
-
Single-turnover kinetics of helicase-catalyzed DNA unwinding monitored continuously by fluorescence energy transfer
-
Bjornson, K. P., M. Amaratunga, K. J. M. Moore, and T. M. Lohman. 1994. Single-turnover kinetics of helicase-catalyzed DNA unwinding monitored continuously by fluorescence energy transfer. Biochemistry. 33:14306-14316.
-
(1994)
Biochemistry
, vol.33
, pp. 14306-14316
-
-
Bjornson, K.P.1
Amaratunga, M.2
Moore, K.J.M.3
Lohman, T.M.4
-
8
-
-
0025222347
-
Bead movement by single kinesin molecules studied with optical tweezers
-
Block, S. M., L. S. Goldstein, and B. J. Schnapp. 1990. Bead movement by single kinesin molecules studied with optical tweezers. Nature. 348:348-352.
-
(1990)
Nature
, vol.348
, pp. 348-352
-
-
Block, S.M.1
Goldstein, L.S.2
Schnapp, B.J.3
-
9
-
-
0034723155
-
Kinetic mechanism of the single-stranded DNA recognition by Escherichia coli replicative helicase DnaB protein. Application of the matrix projection operator technique to analyze stopped-flow kinetics
-
Bujalowski, W., and M. J. Jezewska. 2000. Kinetic mechanism of the single-stranded DNA recognition by Escherichia coli replicative helicase DnaB protein. Application of the matrix projection operator technique to analyze stopped-flow kinetics. J. Mol. Biol. 295:831-852.
-
(2000)
J. Mol. Biol.
, vol.295
, pp. 831-852
-
-
Bujalowski, W.1
Jezewska, M.J.2
-
11
-
-
0035816217
-
E. coli Rep oligomers are required to initiate DNA unwinding in vitro
-
Cheng, W., J. Hsieh, K. M. Brendza, and T. M. Lohman. 2001. E. coli Rep oligomers are required to initiate DNA unwinding in vitro. J. Mol. Biol. 310:327-350.
-
(2001)
J. Mol. Biol.
, vol.310
, pp. 327-350
-
-
Cheng, W.1
Hsieh, J.2
Brendza, K.M.3
Lohman, T.M.4
-
12
-
-
0037080166
-
Direct measurement of single-stranded DNA translocation by PcrA helicase using the fluorescent base analogue 2-aminopurine
-
Dillingham, M. S., D. B. Wigley, and M. R. Webb. 2002. Direct measurement of single-stranded DNA translocation by PcrA helicase using the fluorescent base analogue 2-aminopurine. Biochemistry. 41:643-651.
-
(2002)
Biochemistry
, vol.41
, pp. 643-651
-
-
Dillingham, M.S.1
Wigley, D.B.2
Webb, M.R.3
-
13
-
-
0035905807
-
χ-sequence recognition and DNA translocation by single RecBCD helicase/nuclease molecules
-
Dohoney, K. M., and J. Gelles. 2001. χ-sequence recognition and DNA translocation by single RecBCD helicase/nuclease molecules. Nature. 409:370-374.
-
(2001)
Nature
, vol.409
, pp. 370-374
-
-
Dohoney, K.M.1
Gelles, J.2
-
14
-
-
0029879214
-
A helicase assay based on the displacement of fluorescent, nucleic acid-binding ligands
-
Eggleston, A. K., N. A. Rahim, and S. C. Kowalczykowski. 1996. A helicase assay based on the displacement of fluorescent, nucleic acid-binding ligands. Nucleic Acids Res. 24:1179-1186.
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 1179-1186
-
-
Eggleston, A.K.1
Rahim, N.A.2
Kowalczykowski, S.C.3
-
15
-
-
0024030408
-
Software for an implementation of Weeks' method for the inverse Laplace transform problem
-
Garbow, B. S., G. Giunta, and J. N. Lyness. 1988. Software for an implementation of Weeks' method for the inverse Laplace transform problem. ACM Trans. Math. Soft. 14:163-170.
-
(1988)
ACM Trans. Math. Soft.
, vol.14
, pp. 163-170
-
-
Garbow, B.S.1
Giunta, G.2
Lyness, J.N.3
-
17
-
-
0037057630
-
Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase
-
Ha, T., I. Rasnik, W. Cheng, H. P. Babcock, G. H. Gauss, T. M. Lohman, and S. Chu. 2002. Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase. Nature. 419:638-641.
-
(2002)
Nature
, vol.419
, pp. 638-641
-
-
Ha, T.1
Rasnik, I.2
Cheng, W.3
Babcock, H.P.4
Gauss, G.H.5
Lohman, T.M.6
Chu, S.7
-
18
-
-
0028301341
-
Spectrophotometric assay for enzyme-mediated unwinding of double-stranded DNA
-
Houston, P., and T. Kodadek. 1994. Spectrophotometric assay for enzyme-mediated unwinding of double-stranded DNA. Proc. Natl. Acad. Sci. USA. 91:5471-5474.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 5471-5474
-
-
Houston, P.1
Kodadek, T.2
-
19
-
-
0024463944
-
Movement of microtubules by single kinesin molecules
-
Howard, J., A. J. Hudspeth, and R. D. Vale. 1989. Movement of microtubules by single kinesin molecules. Nature. 342:154-158.
-
(1989)
Nature
, vol.342
, pp. 154-158
-
-
Howard, J.1
Hudspeth, A.J.2
Vale, R.D.3
-
20
-
-
0034719392
-
The DExH protein NPH-II is a processive and directional motor for unwinding RNA
-
Jankowsky, E., C. H. Gross, S. Shuman, and A. M. Pyle. 2000. The DExH protein NPH-II is a processive and directional motor for unwinding RNA. Nature. 403:447-451.
-
(2000)
Nature
, vol.403
, pp. 447-451
-
-
Jankowsky, E.1
Gross, C.H.2
Shuman, S.3
Pyle, A.M.4
-
22
-
-
0030881051
-
Toroidal structure of lambda-exonuclease
-
Kovall, R., and B. W. Matthews. 1997. Toroidal structure of lambda-exonuclease. Science. 277:1824-1827.
-
(1997)
Science
, vol.277
, pp. 1824-1827
-
-
Kovall, R.1
Matthews, B.W.2
-
24
-
-
0029893874
-
Mechanisms of helicase-catalyzed DNA unwinding
-
Lohman, T. M., and K. P. Bjornson. 1996. Mechanisms of helicase-catalyzed DNA unwinding. Annu. Rev. Biochem. 65:169-214.
-
(1996)
Annu. Rev. Biochem.
, vol.65
, pp. 169-214
-
-
Lohman, T.M.1
Bjornson, K.P.2
-
25
-
-
0036447339
-
DNA unwinding step-size of E. coli RecBCD helicase determined from single turnover chemical quenched-flow kinetic studies
-
Lucius, A. L., A. Vindigni, R. Gregorian, J. A. Ali, A. F. Taylor, G. R. Smith, and T. M. Lohman. 2002. DNA unwinding step-size of E. coli RecBCD helicase determined from single turnover chemical quenched-flow kinetic studies. J. Mol. Biol. 324:409-428.
-
(2002)
J. Mol. Biol.
, vol.324
, pp. 409-428
-
-
Lucius, A.L.1
Vindigni, A.2
Gregorian, R.3
Ali, J.A.4
Taylor, A.F.5
Smith, G.R.6
Lohman, T.M.7
-
26
-
-
0037474547
-
A dimer of Escherichia coli UvrD is the active form of the helicase in vitro
-
Maluf, N. K., C. J. Fischer, and T. M. Lohman. 2003. A dimer of Escherichia coli UvrD is the active form of the helicase in vitro. J. Mol. Biol. 325:913-935.
-
(2003)
J. Mol. Biol.
, vol.325
, pp. 913-935
-
-
Maluf, N.K.1
Fischer, C.J.2
Lohman, T.M.3
-
28
-
-
0018858254
-
The kinetics and processivity of nucleic acid polymerases
-
McClure, W. R., and Y. Chow. 1980. The kinetics and processivity of nucleic acid polymerases. Methods Enzymol. 64:277-297.
-
(1980)
Methods Enzymol.
, vol.64
, pp. 277-297
-
-
McClure, W.R.1
Chow, Y.2
-
29
-
-
0033786801
-
Structure and function of hexameric helicases
-
Patel, S. S., and K. M. Picha. 2000. Structure and function of hexameric helicases. Annu. Rev. Biochem. 69:651-697.
-
(2000)
Annu. Rev. Biochem.
, vol.69
, pp. 651-697
-
-
Patel, S.S.1
Picha, K.M.2
-
31
-
-
0029118974
-
Bacteriophage T4 Dda helicase translocates in a unidirectional fashion on single-stranded DNA
-
Raney, K. D., and S. J. Benkovic. 1995. Bacteriophage T4 Dda helicase translocates in a unidirectional fashion on single-stranded DNA. J. Biol. Chem. 270:22236-22242.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 22236-22242
-
-
Raney, K.D.1
Benkovic, S.J.2
-
33
-
-
0024512057
-
Characterization of the helicase activity of the Escherichia coli RecBCD enzyme using a novel helicase assay
-
Roman, L. J., and S. C. Kowalczykowski. 1989. Characterization of the helicase activity of the Escherichia coli RecBCD enzyme using a novel helicase assay. Biochemistry. 28:2863-2873.
-
(1989)
Biochemistry
, vol.28
, pp. 2863-2873
-
-
Roman, L.J.1
Kowalczykowski, S.C.2
-
36
-
-
0037065729
-
Kinetic models of translocation, head-on collision, and DNA cleavage by type I restriction endonucleases
-
Szczelkun, M. D. 2002. Kinetic models of translocation, head-on collision, and DNA cleavage by type I restriction endonucleases. Biochemistry. 41:2067-2074.
-
(2002)
Biochemistry
, vol.41
, pp. 2067-2074
-
-
Szczelkun, M.D.1
-
37
-
-
0019158176
-
Unwinding and rewinding of DNA by the RecBC enzyme
-
Taylor, A., and G. R. Smith. 1980. Unwinding and rewinding of DNA by the RecBC enzyme. Cell. 22:447-457.
-
(1980)
Cell
, vol.22
, pp. 447-457
-
-
Taylor, A.1
Smith, G.R.2
-
39
-
-
0033536183
-
Single kinesin molecules studied with a molecular force clamp
-
Visscher, K., M. J. Schnitzer, and S. M. Block. 1999. Single kinesin molecules studied with a molecular force clamp. Nature. 400:184-189.
-
(1999)
Nature
, vol.400
, pp. 184-189
-
-
Visscher, K.1
Schnitzer, M.J.2
Block, S.M.3
-
40
-
-
0035951425
-
A general model for nucleic acid helicases and their "coupling" within macromolecular machines
-
von Hippel, P. H., and E. Delagoutte. 2001. A general model for nucleic acid helicases and their "coupling" within macromolecular machines. Cell. 104:177-190.
-
(2001)
Cell
, vol.104
, pp. 177-190
-
-
Von Hippel, P.H.1
Delagoutte, E.2
-
41
-
-
0001665007
-
Numerical inversion of Laplace transforms using Laquerre functions
-
Weeks, W. T. 1966. Numerical inversion of Laplace transforms using Laquerre functions. JACM. 13:419-426.
-
(1966)
JACM
, vol.13
, pp. 419-426
-
-
Weeks, W.T.1
-
42
-
-
0033947417
-
Monte Carlo applications to thermal and chemical denaturation experiments of nucleic acids and proteins
-
Williams, D. J., and K. B. Hall. 2000. Monte Carlo applications to thermal and chemical denaturation experiments of nucleic acids and proteins. Methods Enzymol. 321:330-352.
-
(2000)
Methods Enzymol.
, vol.321
, pp. 330-352
-
-
Williams, D.J.1
Hall, K.B.2
-
43
-
-
0034594940
-
Single-molecule studies of the effect of template tension on T7 DNA polymerase activity
-
Wuite, G. J., S. B. Smith, M. Young, D. Keller, and C. Bustamante. 2000. Single-molecule studies of the effect of template tension on T7 DNA polymerase activity. Nature. 404:103-106.
-
(2000)
Nature
, vol.404
, pp. 103-106
-
-
Wuite, G.J.1
Smith, S.B.2
Young, M.3
Keller, D.4
Bustamante, C.5
|