-
1
-
-
0019856947
-
-
T. R. Cech, A. J. Zaug and P. J. Grabowski, Cell, 1981, 29, 487-496.
-
(1981)
Cell
, vol.29
, pp. 487-496
-
-
Cech, T.R.1
Zaug, A.J.2
Grabowski, P.J.3
-
2
-
-
0021013526
-
-
C. Guerrier-Takada, K. Gardiner, T. Marsh, N. Pace and S. Altman, Cell, 1983, 35, 849-857.
-
(1983)
Cell
, vol.35
, pp. 849-857
-
-
Guerrier-Takada, C.1
Gardiner, K.2
Marsh, T.3
Pace, N.4
Altman, S.5
-
3
-
-
0001055719
-
-
M. Oivanen, S. Kuusela and H. Lönnberg, Chem. Rev., 1998, 98, 961-990.
-
(1998)
Chem. Rev.
, vol.98
, pp. 961-990
-
-
Oivanen, M.1
Kuusela, S.2
Lönnberg, H.3
-
4
-
-
0035230816
-
-
S. Mikkola, U. Kaukinen and H. Lönnberg, Cell Biochem. Biophys., 2001, 34, 95-119.
-
(2001)
Cell Biochem. Biophys.
, vol.34
, pp. 95-119
-
-
Mikkola, S.1
Kaukinen, U.2
Lönnberg, H.3
-
5
-
-
0036091739
-
-
S. Mikkola, M. Kosonen and H. Lönnberg, Curr. Org. Chem., 2002, 6, 523-538.
-
(2002)
Curr. Org. Chem.
, vol.6
, pp. 523-538
-
-
Mikkola, S.1
Kosonen, M.2
Lönnberg, H.3
-
6
-
-
0030902181
-
-
P. Perrault and E. V. Anslyn, Angew. Chem., Int. Ed. Engl, 1997, 36, 432-450.
-
(1997)
Angew. Chem., Int. Ed. Engl
, vol.36
, pp. 432-450
-
-
Perrault, P.1
Anslyn, E.V.2
-
8
-
-
0001229651
-
-
B. N. Trawick, A. Daniher and J. K. Bashkin, Chem. Rev., 1998, 98, 939-960.
-
(1998)
Chem. Rev.
, vol.98
, pp. 939-960
-
-
Trawick, B.N.1
Daniher, A.2
Bashkin, J.K.3
-
9
-
-
0037062978
-
-
G. F. Joyce, Nature, 2002, 418, 214-221.
-
(2002)
Nature
, vol.418
, pp. 214-221
-
-
Joyce, G.F.1
-
10
-
-
0034743058
-
-
J. Chem. Soc., Perkin Trans
-
U. Kaukinen, L. Bielecki, S. Mikkola, R. W. Adamiak and H. Lönnberg, J. Chem. Soc., Perkin Trans. 2., 2001, 1024-1031.
-
(2001)
J. Chem. Soc., Perkin Trans.
, vol.2
, pp. 1024-1031
-
-
Kaukinen, U.1
Bielecki, L.2
Mikkola, S.3
Adamiak, R.W.4
Lönnberg, H.5
-
11
-
-
0037079676
-
-
U. Kaukinen, S. Lyytikäinen, S. Mikkola and H. Lönnberg, Nucleic Acids Res., 2002, 30, 468-474.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 468-474
-
-
Kaukinen, U.1
Lyytikäinen, S.2
Mikkola, S.3
Lönnberg, H.4
-
13
-
-
0033450956
-
-
I. Zágorowska, S. Mikkola and H. Lönnberg, Helv. Chim. Acta, 1999, 82, 2105-2111.
-
(1999)
Helv. Chim. Acta
, vol.82
, pp. 2105-2111
-
-
Zágorowska, I.1
Mikkola, S.2
Lönnberg, H.3
-
14
-
-
0033214629
-
-
A. Bibillo, M. Figlerowicz and R. Kierzik, Nucleic Acids Res., 1999, 27, 3931-3937.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 3931-3937
-
-
Bibillo, A.1
Figlerowicz, M.2
Kierzik, R.3
-
15
-
-
0022993310
-
-
V. J. Cannistraro, M. N. Subbarao and D. Kennel, J. Mol. Biol, 1986, 192, 257-274.
-
(1986)
J. Mol. Biol
, vol.192
, pp. 257-274
-
-
Cannistraro, V.J.1
Subbarao, M.N.2
Kennel, D.3
-
16
-
-
0023498849
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
-
A. C. Dock-Bergeon and D. Moras, in Cold Spring Harbor Symposia on Quantitative Biology, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, 1987, Vol. LII, pp. 113-121.
-
(1987)
Cold Spring Harbor Symposia on Quantitative Biology
, vol.52
, pp. 113-121
-
-
Dock-Bergeon, A.C.1
Moras, D.2
-
17
-
-
0027930396
-
-
H. Hosaka, I. Sakabe, K. Sakamato, S. Yokoama and H. Takaku, J. Mol. Chem., 1994, 269, 20090-20094.
-
(1994)
J. Mol. Chem.
, vol.269
, pp. 20090-20094
-
-
Hosaka, H.1
Sakabe, I.2
Sakamato, K.3
Yokoama, S.4
Takaku, H.5
-
18
-
-
0033205045
-
-
N. S. Zhdan, I. L. Kuznetsova, A. V. Vlassov, V. N. Silnikov, M. A. Zenkova and V. V. Vlassov, Bioorg. Khim., 1999, 25, 723-732.
-
(1999)
Bioorg. Khim.
, vol.25
, pp. 723-732
-
-
Zhdan, N.S.1
Kuznetsova, I.L.2
Vlassov, A.V.3
Silnikov, V.N.4
Zenkova, M.A.5
Vlassov, V.V.6
-
21
-
-
0034045423
-
-
A. Bibillo, M. Figlerowicz, K. Ziomek and R. Kierzek, Nucleosides, Nucleotides & Nucleic Acids, 2000, 19, 977-994.
-
(2000)
Nucleosides, Nucleotides & Nucleic Acids
, vol.19
, pp. 977-994
-
-
Bibillo, A.1
Figlerowicz, M.2
Ziomek, K.3
Kierzek, R.4
-
25
-
-
0036225151
-
-
F. Lankaš, T. E. Cheatham III, N. Špackova, P. Hobza, J. Langowski and J. Šponer, Biophys. J., 2002, 82, 2592-2609.
-
(2002)
Biophys. J.
, vol.82
, pp. 2592-2609
-
-
Lankaš, F.1
Cheatham T.E. III2
Špackova, N.3
Hobza, P.4
Langowski, J.5
Šponer, J.6
-
28
-
-
0034672031
-
-
J. Šponer, J. Florián, H.-L. Ng, J. E. Šponer and N. Špacková, Nucleic Acids Res., 2000, 28, 4893-4902.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4893-4902
-
-
Šponer, J.1
Florián, J.2
Ng, H.-L.3
Šponer, J.E.4
Špacková, N.5
-
30
-
-
0030779674
-
-
T. M. Popenda, E. Biala, J. Milecki and R. W. Adamiak, Nucleic Acids Res., 1997, 25, 4589-4598.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4589-4598
-
-
Popenda, T.M.1
Biala, E.2
Milecki, J.3
Adamiak, R.W.4
-
31
-
-
0035905574
-
-
P. Auffinger and E. Westhof, Angew. Chem., Int. Ed., 2001, 40, 4648-4650.
-
(2001)
Angew. Chem., Int. Ed.
, vol.40
, pp. 4648-4650
-
-
Auffinger, P.1
Westhof, E.2
-
32
-
-
84984089229
-
-
E. G. Richards, C. P. Flessel and J. R. Fresco, Biopolymers, 1963, 1, 431-446.
-
(1963)
Biopolymers
, vol.1
, pp. 431-446
-
-
Richards, E.G.1
Flessel, C.P.2
Fresco, J.R.3
-
36
-
-
0034521981
-
-
P. A. Kollman, I. Massova, C. Reyes, B. Kuhn, S. Huo, L. Chong, M. Lee, Y. Duan, W. Wang, O. Donini, P. Cieplak, I Srinivasan, D. A. Case and T. E. Cheatham III, Acc. Chem. Res., 2000, 33, 889-897.
-
(2000)
Acc. Chem. Res.
, vol.33
, pp. 889-897
-
-
Kollman, P.A.1
Massova, I.2
Reyes, C.3
Kuhn, B.4
Huo, S.5
Chong, L.6
Lee, M.7
Duan, Y.8
Wang, W.9
Donini, O.10
Cieplak, P.11
Srinivasan, I.12
Case, D.A.13
Cheatham T.E. III14
-
37
-
-
0001398008
-
-
J. Wang, P. Cieplak and P. A. Kollman, J. Comput. Chem., 2000, 21, 1049-1074.
-
(2000)
J. Comput. Chem.
, vol.21
, pp. 1049-1074
-
-
Wang, J.1
Cieplak, P.2
Kollman, P.A.3
-
38
-
-
0141688512
-
-
University of California, San Francisco, USA
-
D. A. Case, D. A. Pearlman, J. W. Caldwell, T. E. Cheatham III, J. Wang, W. S. Ross, C. L. Simmerling, T. A. Darden, K. M. Merz, R. V. Stanton, A. L. Cheng, J. J. Vincent, M. Crowley, V. Tsui, H. Gohlke, R. J. Radmer, Y. Duan, J. Pitera, I. Massova, G. L. Seibel, U. C. Singh, P. K. Weiner, P. A. Kollman, AMBER 7.0, University of California, San Francisco, USA, 2002.
-
(2002)
AMBER 7.0
-
-
Case, D.A.1
Pearlman, D.A.2
Caldwell, J.W.3
Cheatham T.E. III4
Wang, J.5
Ross, W.S.6
Simmerling, C.L.7
Darden, T.A.8
Merz, K.M.9
Stanton, R.V.10
Cheng, A.L.11
Vincent, J.J.12
Crowley, M.13
Tsui, V.14
Gohlke, H.15
Radmer, R.J.16
Duan, Y.17
Pitera, J.18
Massova, I.19
Seibel, G.L.20
Singh, U.C.21
Weiner, P.K.22
Kollman, P.A.23
more..
-
39
-
-
0036643478
-
-
F. L. Gervasio, R. Chelli, P. Procacci and V. Schettino, Proteins: Struct., Funct., Genet., 2002, 48, 117-125.
-
(2002)
Proteins: Struct., Funct., Genet.
, vol.48
, pp. 117-125
-
-
Gervasio, F.L.1
Chelli, R.2
Procacci, P.3
Schettino, V.4
-
40
-
-
84962349365
-
-
J. Florián, J. Šponer and A. Warshel, J. Phys. Chem. B, 1999, 103, 884-892.
-
(1999)
J. Phys. Chem. B
, vol.103
, pp. 884-892
-
-
Florián, J.1
Šponer, J.2
Warshel, A.3
-
44
-
-
0006087753
-
-
S. M. Freier, K. O. Hill, T. G. Dewey, L. A. Marky, K. J. Breslauer and D. H. Turner, Biochemistry, 1981, 20, 6198-6206.
-
(1981)
Biochemistry
, vol.20
, pp. 6198-6206
-
-
Freier, S.M.1
Hill, K.O.2
Dewey, T.G.3
Marky, L.A.4
Breslauer, K.J.5
Turner, D.H.6
-
47
-
-
0035339966
-
-
Y. Takagi, M. Warashina, W. J. Stec, K. Yoshinari and K. Taira, Nucleic Acids Res., 2001, 29, 11815-1834.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 11815-11834
-
-
Takagi, Y.1
Warashina, M.2
Stec, W.J.3
Yoshinari, K.4
Taira, K.5
-
48
-
-
0001687582
-
-
M. Kosonen, K. Hakala and H. Lönnberg, J. Chem. Soc., Perkin Trans, 2., 1998, 663-670.
-
(1998)
J. Chem. Soc., Perkin Trans
, vol.2
, pp. 663-670
-
-
Kosonen, M.1
Hakala, K.2
Lönnberg, H.3
-
49
-
-
0042281242
-
-
M. Kosonen, R. Seppänen, O. Wichmann and H. Lönnberg, J. Chem. Soc., Perkin Trans. 2, 1999, 2433-2439.
-
(1999)
J. Chem. Soc., Perkin Trans.
, vol.2
, pp. 2433-2439
-
-
Kosonen, M.1
Seppänen, R.2
Wichmann, O.3
Lönnberg, H.4
-
51
-
-
0141465324
-
-
SYBYL, Tripos Associates, St. Louis, Missouri, USA, 1998
-
SYBYL, Tripos Associates, St. Louis, Missouri, USA, 1998.
-
-
-
-
53
-
-
33846823909
-
-
T. Darden, D. York and L. Pedersen, J. Chem. Phys., 1993, 98, 10089-10092.
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
54
-
-
33645961739
-
-
U. Essmann, L. Perera, M. L. Berkowitz, T. Darden, H. Lee and L. G. Pedersen, J. Chem. Phys., 1995, 103, 8577-8593.
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 8577-8593
-
-
Essmann, U.1
Perera, L.2
Berkowitz, M.L.3
Darden, T.4
Lee, H.5
Pedersen, L.G.6
-
55
-
-
0141465322
-
-
ed. L. R. Pratt and G. Hummer, American Institute of Physics, Melville, New York
-
C. Sagui and T. A. Darden, in Simulation and Theory of Electrostatic Interactions in Solution, ed. L. R. Pratt and G. Hummer, American Institute of Physics, Melville, New York, 1999, pp. 104-113.
-
(1999)
Simulation and Theory of Electrostatic Interactions in Solution
, pp. 104-113
-
-
Sagui, C.1
Darden, T.A.2
-
56
-
-
0034506266
-
-
A. Toukmaji, C. Sagui, J. Board and T. Darden, J. Chem. Phys., 2000, 113, 10913-10927.
-
(2000)
J. Chem. Phys.
, vol.113
, pp. 10913-10927
-
-
Toukmaji, A.1
Sagui, C.2
Board, J.3
Darden, T.4
-
57
-
-
33646940952
-
-
J.-P. Ryckaert, G. Ciccotti and H. J. C. Berendsen, J. Comput. Phys., 1977, 23, 327-341.
-
(1977)
J. Comput. Phys.
, vol.23
, pp. 327-341
-
-
Ryckaert, J.-P.1
Ciccotti, G.2
Berendsen, H.J.C.3
-
60
-
-
0003676577
-
-
Department of Biochemistry and Molecular Biophysics, Columbia University, New York, USA
-
A. Nicholls, K. A. Sharp and B. Honig, Delphi, Department of Biochemistry and Molecular Biophysics, Columbia University, New York, USA, 1990.
-
(1990)
Delphi
-
-
Nicholls, A.1
Sharp, K.A.2
Honig, B.3
-
62
-
-
0031788539
-
-
T. E. Cheatham, III, J. Srinivasa, D. A. Case and P. A. Kollman, J. Biomol. Struct. Dynam., 1998, 16, 265-280.
-
(1998)
J. Biomol. Struct. Dynam.
, vol.16
, pp. 265-280
-
-
Cheatham T.E. III1
Srinivasa, J.2
Case, D.A.3
Kollman, P.A.4
-
63
-
-
0030040323
-
-
M. F. Sanner, A. J. Olson and J. C. Spehner, Biopolymers, 1996, 38, 305-320.
-
(1996)
Biopolymers
, vol.38
, pp. 305-320
-
-
Sanner, M.F.1
Olson, A.J.2
Spehner, J.C.3
-
64
-
-
0030905954
-
-
J. Šponer, H. A. Gabb, J. Leszczynski and P. Hobza., Biophys. J., 1997, 73, 76-87.
-
(1997)
Biophys. J.
, vol.73
, pp. 76-87
-
-
Šponer, J.1
Gabb, H.A.2
Leszczynski, J.3
Hobza, P.4
-
65
-
-
33748621478
-
-
J. Šponer, J. Leszczynski and P. Hobza, J. Phys. Chem., 1996, 100, 5590-5596.
-
(1996)
J. Phys. Chem.
, vol.100
, pp. 5590-5596
-
-
Šponer, J.1
Leszczynski, J.2
Hobza, P.3
-
68
-
-
0004133516
-
-
Gaussian, Inc., Pittsburgh PA, USA
-
M. J. Frisch, G. W. Trucks, H. B. Schlegel, G. E. Scuseria, M. A. Robb, J. R. Cheeseman, V. G. Zakrzewski, J. A. Montgomery, Jr., R. E. Stratmann, J. C. Burant, S. Dapprich, J. M. Millam, A. D. Daniels, K. N. Kudin, M. C. Strain, O. Farkas, J. Tomasi, V. Barone, M. Cossi, R. Cammi, B. Mennucci, C. Pomelli, C. Adamo, S. Clifford, J. Ochterski, G. A. Petersson, P. Y. Ayala, Q. Cui, K. Morokuma, D. K. Malick, A. D. Rabuck, K. Raghavachari, J. B. Foresman, I Cioslowski, J. V. Ortiz, A. G. Baboul, B. B. Stefanov, G. Liu, A. Liashenko, P. Piskorz, I. Komaromi, R. Gomperts, R. L. Martin, D. J. Fox, T. Keith, M. A. Al-Laham, C. Y. Peng, A. Nanayakkara, C. Gonzalez, M. Challacombe, P. M. W. Gill, B. G. Johnson, W. Chen, M. W. Wong, J. L. Andres, M. Head-Gordon, E. S. Replogle and J. A. Pople, Gaussian 98, Revision A.1., 1998, Gaussian, Inc., Pittsburgh PA, USA.
-
(1998)
Gaussian 98, Revision A.1.
-
-
Frisch, M.J.1
Trucks, G.W.2
Schlegel, H.B.3
Scuseria, G.E.4
Robb, M.A.5
Cheeseman, J.R.6
Zakrzewski, V.G.7
Montgomery J.A., Jr.8
Stratmann, R.E.9
Burant, J.C.10
Dapprich, S.11
Millam, J.M.12
Daniels, A.D.13
Kudin, K.N.14
Strain, M.C.15
Farkas, O.16
Tomasi, J.17
Barone, V.18
Cossi, M.19
Cammi, R.20
Mennucci, B.21
Pomelli, C.22
Adamo, C.23
Clifford, S.24
Ochterski, J.25
Petersson, G.A.26
Ayala, P.Y.27
Cui, Q.28
Morokuma, K.29
Malick, D.K.30
Rabuck, A.D.31
Raghavachari, K.32
Foresman, J.B.33
Cioslowski, I.34
Ortiz, J.V.35
Baboul, A.G.36
Stefanov, B.B.37
Liu, G.38
Liashenko, A.39
Piskorz, P.40
Komaromi, I.41
Gomperts, R.42
Martin, R.L.43
Fox, D.J.44
Keith, T.45
Al-Laham, M.A.46
Peng, C.Y.47
Nanayakkara, A.48
Gonzalez, C.49
Challacombe, M.50
Gill, P.M.W.51
Johnson, B.G.52
Chen, W.53
Wong, M.W.54
Andres, J.L.55
Head-Gordon, M.56
Replogle, E.S.57
Pople, J.A.58
more..
|