-
2
-
-
84893488890
-
Adaptation reviewed: A phylogenetic methodology for studying character macroevolution
-
BAUM, D. A., AND A. LARSON. 1991. Adaptation reviewed: A phylogenetic methodology for studying character macroevolution. Syst. Zool. 40:1-18.
-
(1991)
Syst. Zool.
, vol.40
, pp. 1-18
-
-
Baum, D.A.1
Larson, A.2
-
3
-
-
0031084426
-
Searching for phylogenetic trees under the frequency parsimony criterion: An approximation using generalized parsimony
-
BERLOCHER, S. H., AND D. L. SWOFFORD. 1997. Searching for phylogenetic trees under the frequency parsimony criterion: An approximation using generalized parsimony. Syst. Biol. 46:211-215.
-
(1997)
Syst. Biol.
, vol.46
, pp. 211-215
-
-
Berlocher, S.H.1
Swofford, D.L.2
-
4
-
-
0031224811
-
Morphology, fossils, divergence timing, and the phylogenetic relationships of Gavialis
-
BROCHU, C. A. 1997. Morphology, fossils, divergence timing, and the phylogenetic relationships of Gavialis. Syst. Biol. 46:479-522.
-
(1997)
Syst. Biol.
, vol.46
, pp. 479-522
-
-
Brochu, C.A.1
-
5
-
-
0002043704
-
Explanations of homoplasy at different levels of biological organization
-
(M. J. Sanderson and L. Hufford, eds.). Academic Press, San Diego
-
BROOKS, D. R. 1996. Explanations of homoplasy at different levels of biological organization. Pages 3-36 in Homoplasy. The recurrence of similarity in evolution (M. J. Sanderson and L. Hufford, eds.). Academic Press, San Diego.
-
(1996)
Homoplasy. The Recurrence of Similarity in Evolution
, pp. 3-36
-
-
Brooks, D.R.1
-
6
-
-
0003552740
-
-
Univ. Chicago Press, Chicago
-
BROOKS, D. R., AND D. A. MCLENNAN. 1991. Phylogeny, ecology, and behavior: A research program in comparative biology. Univ. Chicago Press, Chicago.
-
(1991)
Phylogeny, Ecology, and Behavior: A Research Program in Comparative Biology
-
-
Brooks, D.R.1
McLennan, D.A.2
-
7
-
-
0030823001
-
Exceptional convergent evolution in a virus
-
BULL, J. J., M. R. BADGETT, H. A. WICHMAN, J. P. HUELSENBECK, D. M. HILLIS, A. GULATI, C. HO, AND I. J. MOLINEUX. 1997. Exceptional convergent evolution in a virus. Genetics 147:1497-1507.
-
(1997)
Genetics
, vol.147
, pp. 1497-1507
-
-
Bull, J.J.1
Badgett, M.R.2
Wichman, H.A.3
Huelsenbeck, J.P.4
Hillis, D.M.5
Gulati, A.6
Ho, C.7
Molineux, I.J.8
-
8
-
-
0041600506
-
Species boundaries and species diversity in central Texas hemidactyliine plethodontid salamanders, genus Eurycea
-
(R. Bruce, L. Houck, and R. Jaeger, eds.). Kluwer Academic/Plenum, New York
-
CHIPPINDALE, P. T. 2000. Species boundaries and species diversity in central Texas hemidactyliine plethodontid salamanders, genus Eurycea. Pages 149-165 in The biology of plethodontid salamanders (R. Bruce, L. Houck, and R. Jaeger, eds.). Kluwer Academic/Plenum, New York.
-
(2000)
The Biology of Plethodontid Salamanders
, pp. 149-165
-
-
Chippindale, P.T.1
-
9
-
-
0003033816
-
Phylogenetic relationships and systematic revision of central Texas hemidactyliine plethodontid salamanders
-
CHIPPINDALE, P. T., A. H. PRICE, J. J. WIENS, AND D. M. HILLIS. 2000. Phylogenetic relationships and systematic revision of central Texas hemidactyliine plethodontid salamanders. Herpetol. Monogr. 14:1-80.
-
(2000)
Herpetol. Monogr.
, vol.14
, pp. 1-80
-
-
Chippindale, P.T.1
Price, A.H.2
Wiens, J.J.3
Hillis, D.M.4
-
10
-
-
12044258419
-
Weighting, partitioning, and combining characters in phylogenetic analysis
-
CHIPPINDALE, P. T., AND J. J. WIENS. 1994. Weighting, partitioning, and combining characters in phylogenetic analysis. Syst. Biol. 43:278-287.
-
(1994)
Syst. Biol.
, vol.43
, pp. 278-287
-
-
Chippindale, P.T.1
Wiens, J.J.2
-
11
-
-
84989448186
-
Cladistic tests of adaptational hypotheses
-
CODDINGTON, J. A. 1988. Cladistic tests of adaptational hypotheses. Cladistics 4:3-22.
-
(1988)
Cladistics
, vol.4
, pp. 3-22
-
-
Coddington, J.A.1
-
13
-
-
0004000773
-
-
Harvard Univ. Press, Cambridge, Massachusetts
-
CULVER, D. C., T. C. KANE, AND D. W. FONG. 1995. Adaptation and natural selection in caves. Harvard Univ. Press, Cambridge, Massachusetts.
-
(1995)
Adaptation and Natural Selection in Caves
-
-
Culver, D.C.1
Kane, T.C.2
Fong, D.W.3
-
14
-
-
0004034745
-
-
Facsimile of the 1st edition. Harvard Univ. Press, Cambridge, Massachusetts
-
DARWIN, C. 1859. On the origin of species. Facsimile of the 1st edition. Harvard Univ. Press, Cambridge, Massachusetts.
-
(1859)
On the Origin of Species
-
-
Darwin, C.1
-
15
-
-
0001546577
-
Separate versus combined analysis of phylogenetic evidence
-
DE QUEIROZ, A., M. J. DONOGHUE, AND J. KIM. 1995. Separate versus combined analysis of phylogenetic evidence. Annu. Rev. Ecol. Syst. 26:657-681.
-
(1995)
Annu. Rev. Ecol. Syst.
, vol.26
, pp. 657-681
-
-
De Queiroz, A.1
Donoghue, M.J.2
Kim, J.3
-
16
-
-
84907129933
-
Enzyme clearing of Alcian blue stained whole small vertebrates for demonstration of cartilage
-
DINGERKUS, G., AND L. D. UHLER. 1977. Enzyme clearing of Alcian blue stained whole small vertebrates for demonstration of cartilage. Stain Technol. 52:229-232.
-
(1977)
Stain Technol.
, vol.52
, pp. 229-232
-
-
Dingerkus, G.1
Uhler, L.D.2
-
17
-
-
0001610065
-
The suitability of molecular and morphological evidence in reconstructing plant phylogeny
-
(P. S. Soltis, D. E. Soltis, and J. J. Doyle, eds.). Chapman and Hall, New York
-
DONOGHUE, M. J., AND M. J. SANDERSON. 1992. The suitability of molecular and morphological evidence in reconstructing plant phylogeny. Pages 340-368 in Molecular systematics of plants (P. S. Soltis, D. E. Soltis, and J. J. Doyle, eds.). Chapman and Hall, New York.
-
(1992)
Molecular Systematics of Plants
, pp. 340-368
-
-
Donoghue, M.J.1
Sanderson, M.J.2
-
18
-
-
0027983037
-
Convergent evolution: The need to be explicit
-
DOOLITTLE, R. F. 1994. Convergent evolution: The need to be explicit. Trends Biochem. Sci. 19:15-18.
-
(1994)
Trends Biochem. Sci.
, vol.19
, pp. 15-18
-
-
Doolittle, R.F.1
-
19
-
-
0001190205
-
Morphological correlations in evolution: Consequences for phylogenetic analysis
-
EMERSON, S. B., AND P. A. HASTINGS. 1998. Morphological correlations in evolution: Consequences for phylogenetic analysis. Q. Rev. Biol. 73:141-162.
-
(1998)
Q. Rev. Biol.
, vol.73
, pp. 141-162
-
-
Emerson, S.B.1
Hastings, P.A.2
-
20
-
-
84959798530
-
Cases in which parsimony or compatibility methods will be positively misleading
-
FELSENSTEIN, J. 1978. Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool. 27:401-410.
-
(1978)
Syst. Zool.
, vol.27
, pp. 401-410
-
-
Felsenstein, J.1
-
21
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
FELSENSTEIN, J. 1985a. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
22
-
-
0022203256
-
Phylogenies and the comparative method
-
FELSENSTEIN, J. 1985b. Phylogenies and the comparative method. Am. Nat. 125:1-15.
-
(1985)
Am. Nat.
, vol.125
, pp. 1-15
-
-
Felsenstein, J.1
-
23
-
-
0000888766
-
Vestigialization and the loss of nonfunctional characters
-
FONG, D. W., T. C. KANE, AND D. C. CULVER. 1995. Vestigialization and the loss of nonfunctional characters. Annu. Rev. Ecol. Syst. 26:249-268.
-
(1995)
Annu. Rev. Ecol. Syst.
, vol.26
, pp. 249-268
-
-
Fong, D.W.1
Kane, T.C.2
Culver, D.C.3
-
26
-
-
0003012551
-
Homoplasy in molecular vs. morphological data: The likelihood of correct phylogenetic inference
-
(T. J. Givnish and K. J. Sytsma, eds.). Cambridge Univ. Press, Cambridge, U.K.
-
GIVNISH, T. J., AND K. J. SYTSMA. 1997. Homoplasy in molecular vs. morphological data: The likelihood of correct phylogenetic inference. Pages 55-101 in Molecular evolution and adaptive radiation (T. J. Givnish and K. J. Sytsma, eds.). Cambridge Univ. Press, Cambridge, U.K.
-
(1997)
Molecular Evolution and Adaptive Radiation
, pp. 55-101
-
-
Givnish, T.J.1
Sytsma, K.J.2
-
27
-
-
0034351387
-
Likelihood-based tests of topologies in phylogenetics
-
GOLDMAN, N., J. P. ANDERSON, AND A. G. RODRIGO. 2000. Likelihood-based tests of topologies in phylogenetics. Syst. Biol. 49:652-670.
-
(2000)
Syst. Biol.
, vol.49
, pp. 652-670
-
-
Goldman, N.1
Anderson, J.P.2
Rodrigo, A.G.3
-
28
-
-
85008750453
-
Parallel evolution in opisthobranch gastropods and its implications for phylogenetic methodology
-
GOSLINER, T. M., AND M. T. GHISELIN. 1984. Parallel evolution in opisthobranch gastropods and its implications for phylogenetic methodology. Syst. Zool. 33:255-274.
-
(1984)
Syst. Zool.
, vol.33
, pp. 255-274
-
-
Gosliner, T.M.1
Ghiselin, M.T.2
-
30
-
-
0031556933
-
A new model for discrete character evolution
-
GRAFEN, A., AND M. RIDLEY. 1997. A new model for discrete character evolution. J. Theor. Biol. 184:7-14.
-
(1997)
J. Theor. Biol.
, vol.184
, pp. 7-14
-
-
Grafen, A.1
Ridley, M.2
-
31
-
-
0027133373
-
Miniaturization of body size: Organismal consequences and evolutionary significance
-
HANKEN, J., AND D. B. WAKE. 1993. Miniaturization of body size: Organismal consequences and evolutionary significance. Annu. Rev. Ecol. Syst. 24:501-520.
-
(1993)
Annu. Rev. Ecol. Syst.
, vol.24
, pp. 501-520
-
-
Hanken, J.1
Wake, D.B.2
-
33
-
-
0025873443
-
On the maximum likelihood method in molecular phylogenetics
-
HASEGAWA, M., H. KISHINO, AND N. SAITOU. 1991. On the maximum likelihood method in molecular phylogenetics. J. Mol. Evol. 32:443-445.
-
(1991)
J. Mol. Evol.
, vol.32
, pp. 443-445
-
-
Hasegawa, M.1
Kishino, H.2
Saitou, N.3
-
34
-
-
0022376704
-
Dating of the human-ape splitting by a molecular clock of mitrochondrial DNA
-
HASEGAWA, M., H. KISHINO, AND T. YANO. 1985. Dating of the human-ape splitting by a molecular clock of mitrochondrial DNA. J. Mol. Evol. 22:160-174.
-
(1985)
J. Mol. Evol.
, vol.22
, pp. 160-174
-
-
Hasegawa, M.1
Kishino, H.2
Yano, T.3
-
35
-
-
0030254705
-
Re: Molecules and morphology in amniote phylogeny
-
HEDGES, S. B., AND L. R. MAXSON. 1996. Re: Molecules and morphology in amniote phylogeny. Mol. Phylogenet. Evol. 6:312-314.
-
(1996)
Mol. Phylogenet. Evol.
, vol.6
, pp. 312-314
-
-
Hedges, S.B.1
Maxson, L.R.2
-
36
-
-
0027971431
-
Molecules vs. morphology in avian evolution: The case of the "pelecaniform" birds
-
HEDGES, S. B., AND C. G. SIBLEY. 1994. Molecules vs. morphology in avian evolution: The case of the "pelecaniform" birds. Proc. Natl. Acad. Sci. USA 91:9861-9865.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 9861-9865
-
-
Hedges, S.B.1
Sibley, C.G.2
-
38
-
-
0032023889
-
Taxonomic sampling, phylogenetic accuracy, and investigator bias
-
HILLIS, D. M. 1998. Taxonomic sampling, phylogenetic accuracy, and investigator bias. Syst. Biol. 47:3-8.
-
(1998)
Syst. Biol.
, vol.47
, pp. 3-8
-
-
Hillis, D.M.1
-
39
-
-
12044253190
-
An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis
-
HILLIS, D. M., AND J. J. BULL. 1993. An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst. Biol. 42:182-192.
-
(1993)
Syst. Biol.
, vol.42
, pp. 182-192
-
-
Hillis, D.M.1
Bull, J.J.2
-
40
-
-
0034794312
-
A new species of subterranean blind salamander (Plethodontidae: Hemidactyliini: Eurycea: Typhlomolge) from Austin, Texas, and systematic revision of central Texas paedomorphic salamanders
-
HILLIS, D. M., D. A. CHAMBERLAIN, T. P. WILCOX, AND P. T. CHIPPINDALE. 2001. A new species of subterranean blind salamander (Plethodontidae: Hemidactyliini: Eurycea: Typhlomolge) from Austin, Texas, and systematic revision of central Texas paedomorphic salamanders. Herpetologica 57:266-280.
-
(2001)
Herpetologica
, vol.57
, pp. 266-280
-
-
Hillis, D.M.1
Chamberlain, D.A.2
Wilcox, T.P.3
Chippindale, P.T.4
-
41
-
-
0000631106
-
Molecules versus morphology in systematics: Conflicts, artifacts, and misconceptions
-
(J. J. Wiens, ed.). Smithsonian Institution Press, Washington, D.C.
-
HILLIS, D. M., AND J. J. WIENS. 2000. Molecules versus morphology in systematics: Conflicts, artifacts, and misconceptions. Pages 1-19 in Phylogenetic analysis of morphological data (J. J. Wiens, ed.). Smithsonian Institution Press, Washington, D.C.
-
(2000)
Phylogenetic Analysis of Morphological Data
, pp. 1-19
-
-
Hillis, D.M.1
Wiens, J.J.2
-
42
-
-
0030961748
-
Old World fruitbat phylogeny: Evidence for convergent evolution and an endemic African clade
-
HOLLAR, L. J., AND M. S. SPRINGER. 1997. Old World fruitbat phylogeny: Evidence for convergent evolution and an endemic African clade. Proc. Natl. Acad. Sci. USA 94:5716-5721.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 5716-5721
-
-
Hollar, L.J.1
Springer, M.S.2
-
44
-
-
0026593622
-
Are parallel morphologies the result of similar selection pressures?
-
JONES, R., D. C. CULVER, AND T. C. KANE. 1992. Are parallel morphologies the result of similar selection pressures? Evolution 46:353-365.
-
(1992)
Evolution
, vol.46
, pp. 353-365
-
-
Jones, R.1
Culver, D.C.2
Kane, T.C.3
-
45
-
-
0000732090
-
Evolution of protein molecules
-
(H. N. Munro, ed.). Academic Press, New York
-
JUKES, T. H., AND C. R. CANTOR. 1969. Evolution of protein molecules. Pages 21-132 in Mammalian protein metabolism (H. N. Munro, ed.). Academic Press, New York.
-
(1969)
Mammalian Protein Metabolism
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
47
-
-
0024307824
-
Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
-
KISHINO, H., AND M. HASEGAWA. 1989. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29:170-179.
-
(1989)
J. Mol. Evol.
, vol.29
, pp. 170-179
-
-
Kishino, H.1
Hasegawa, M.2
-
48
-
-
0003885805
-
-
Oxford Univ. Press, Oxford, U.K.
-
KITCHING, I. J., P. L. FOREY, C. J. HUMPHRIES, AND D. M. WILLIAMS. 1998. Cladistics. The theory and practice of parsimony analysis, 2nd edition. Oxford Univ. Press, Oxford, U.K.
-
(1998)
Cladistics. The Theory and Practice of Parsimony Analysis, 2nd Edition
-
-
Kitching, I.J.1
Forey, P.L.2
Humphries, C.J.3
Williams, D.M.4
-
49
-
-
0001803604
-
Molecular approaches to the evolutionary biology of plethodontid salamanders
-
LARSON, A., AND P. T. CHIPPINDALE. 1993. Molecular approaches to the evolutionary biology of plethodontid salamanders. Herpetologica 49:204-215.
-
(1993)
Herpetologica
, vol.49
, pp. 204-215
-
-
Larson, A.1
Chippindale, P.T.2
-
50
-
-
0001296141
-
Phylogenetic systematics of adaptation
-
(M. R. Rose and G. V. Lauder, eds.). Academic Press, San Diego
-
LARSON, A., AND J. B. LOSOS. 1996. Phylogenetic systematics of adaptation. Pages 187-229 in Adaptation (M. R. Rose and G. V. Lauder, eds.). Academic Press, San Diego.
-
(1996)
Adaptation
, pp. 187-229
-
-
Larson, A.1
Losos, J.B.2
-
51
-
-
0003421005
-
-
Sinauer, Sunderland, Massachusetts
-
LI, W.-H. 1997. Molecular evolution. Sinauer, Sunderland, Massachusetts.
-
(1997)
Molecular Evolution
-
-
Li, W.-H.1
-
52
-
-
0033085055
-
Power of the concentrated changes test for correlated evolution
-
LORCH, P. D., AND J. M. EADIE. 1999. Power of the concentrated changes test for correlated evolution. Syst. Biol. 48:170-191.
-
(1999)
Syst. Biol.
, vol.48
, pp. 170-191
-
-
Lorch, P.D.1
Eadie, J.M.2
-
53
-
-
0000989477
-
A method for testing the correlated evolution of two binary characters: Are gains or losses concentrated on certain branches of a phylogenetic tree?
-
MADDISON, W. P. 1990. A method for testing the correlated evolution of two binary characters: Are gains or losses concentrated on certain branches of a phylogenetic tree? Evolution 44:539-557.
-
(1990)
Evolution
, vol.44
, pp. 539-557
-
-
Maddison, W.P.1
-
54
-
-
0031504952
-
Gene trees in species trees
-
MADDISON, W. P. 1997. Gene trees in species trees. Syst. Biol. 46:523-536.
-
(1997)
Syst. Biol.
, vol.46
, pp. 523-536
-
-
Maddison, W.P.1
-
55
-
-
0003766436
-
-
Sinauer, Sunderland, Massachusetts
-
MADDISON, W. P., AND D. R. MADDISON. 1992. MacClade, version 3.0. Analysis of phylogeny and character evolution. Sinauer, Sunderland, Massachusetts.
-
(1992)
MacClade, Version 3.0. Analysis of Phylogeny and Character Evolution
-
-
Maddison, W.P.1
Maddison, D.R.2
-
57
-
-
0034237772
-
Adaptation and the comparative method
-
MARTINS, E. P. 2000. Adaptation and the comparative method. Trends Ecol. Evol. 15:296-299.
-
(2000)
Trends Ecol. Evol.
, vol.15
, pp. 296-299
-
-
Martins, E.P.1
-
59
-
-
0033278652
-
Data set incongruence and correlated character evolution: An example of functional convergence in the hind-limbs of stifftail diving ducks
-
MCCRACKEN, K. G., J. HARSHMAN, D. A. MCCLELLAN, AND A. D. AFTON. 1999. Data set incongruence and correlated character evolution: An example of functional convergence in the hind-limbs of stifftail diving ducks. Syst. Biol. 48:683-714.
-
(1999)
Syst. Biol.
, vol.48
, pp. 683-714
-
-
McCracken, K.G.1
Harshman, J.2
McClellan, D.A.3
Afton, A.D.4
-
60
-
-
0031932382
-
Molecular and osteological analyses of heron phylogeny: Sources of incongruence
-
MCCRACKEN, K. G., AND F. H. SHELDON. 1998. Molecular and osteological analyses of heron phylogeny: Sources of incongruence. Auk 115:127-141.
-
(1998)
Auk
, vol.115
, pp. 127-141
-
-
McCracken, K.G.1
Sheldon, F.H.2
-
61
-
-
0028975545
-
Testing hypotheses about evolutionary change on single branches of a phylogeny using evolutionary contrasts
-
MCPEEK, M. A. 1995. Testing hypotheses about evolutionary change on single branches of a phylogeny using evolutionary contrasts. Am. Nat. 145:686-703.
-
(1995)
Am. Nat.
, vol.145
, pp. 686-703
-
-
McPeek, M.A.1
-
62
-
-
0002348749
-
Complexity and homoplasy
-
(M. J. Sanderson and L. Hufford, eds.). Academic Press, San Diego
-
MCSHEA, D. W. 1996. Complexity and homoplasy. Pages 207-225 in Homoplasy. The recurrence of similarity in evolution (M. J. Sanderson and L. Hufford, eds.). Academic Press, San Diego.
-
(1996)
Homoplasy. The Recurrence of Similarity in Evolution
, pp. 207-225
-
-
McShea, D.W.1
-
63
-
-
0040902398
-
Eurycea tridentifera, a new species of troglobitic salamander from Texas and a reclassification of Typhlomolge rathbuni
-
MITCHELL, R. W., AND J. R. REDDELL. 1965. Eurycea tridentifera, a new species of troglobitic salamander from Texas and a reclassification of Typhlomolge rathbuni. Tex. J. Sci. 17:12-27.
-
(1965)
Tex. J. Sci.
, vol.17
, pp. 12-27
-
-
Mitchell, R.W.1
Reddell, J.R.2
-
64
-
-
0039716386
-
Some aspects of the osteology and evolution of the neotenic spring and cave salamanders (Eurycea, Plethodontidae) of central Texas
-
MITCHELL, R. W., AND R. E. SMITH. 1972. Some aspects of the osteology and evolution of the neotenic spring and cave salamanders (Eurycea, Plethodontidae) of central Texas. Tex. J. Sci. 23:343-362.
-
(1972)
Tex. J. Sci.
, vol.23
, pp. 343-362
-
-
Mitchell, R.W.1
Smith, R.E.2
-
65
-
-
0002267691
-
Phylogenetic relationships of mitochondrial DNA under various demographic models of speciation
-
(E. Nevo and S. Karlin, eds.). Academic Press, New York
-
NEIGEL, J. E., AND J. C. AVISE. 1986. Phylogenetic relationships of mitochondrial DNA under various demographic models of speciation. Pages 515-534 in Evolutionary processes and theory (E. Nevo and S. Karlin, eds.). Academic Press, New York.
-
(1986)
Evolutionary Processes and Theory
, pp. 515-534
-
-
Neigel, J.E.1
Avise, J.C.2
-
66
-
-
0028097770
-
Detecting correlated evolution on phylogenies: A general method for the comparative analysis of discrete characters
-
PAGEL, M. D. 1994. Detecting correlated evolution on phylogenies: A general method for the comparative analysis of discrete characters. Proc. R. Soc. Lond. B Biol. Sci. 255:37-45.
-
(1994)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.255
, pp. 37-45
-
-
Pagel, M.D.1
-
67
-
-
0034947295
-
Extreme morphological and ecological homoplasy in tropical salamanders
-
PARRA-OLEA, G., AND D. B. WAKE. 2001. Extreme morphological and ecological homoplasy in tropical salamanders. Proc. Natl. Acad. Sci. USA 98:7888-7891.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 7888-7891
-
-
Parra-Olea, G.1
Wake, D.B.2
-
68
-
-
0024117869
-
Homology in classical and molecular biology
-
PATTERSON, C. 1988. Homology in classical and molecular biology. Mol. Biol. Evol. 5:603-625.
-
(1988)
Mol. Biol. Evol.
, vol.5
, pp. 603-625
-
-
Patterson, C.1
-
70
-
-
0003070868
-
Character selection and the methodology of morphological phylogenetics
-
(J. J. Wiens, ed.). Smithsonian Institution Press, Washington, D.C.
-
POE, S., AND J. J. WIENS. 2000. Character selection and the methodology of morphological phylogenetics. Pages 20-36 in Phylogenetic analysis of morphological data. (J. J. Wiens, ed.). Smithsonian Institution Press, Washington, D.C.
-
(2000)
Phylogenetic Analysis of Morphological Data
, pp. 20-36
-
-
Poe, S.1
Wiens, J.J.2
-
71
-
-
0031773680
-
Modeltest: Testing the model of DNA substitution
-
POSADA, D., AND K. A. CRANDALL. 1998. Modeltest: Testing the model of DNA substitution. Bioinformatics 14:817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
72
-
-
0003222228
-
Generic boundaries in Texas cave salamanders, and a redescription of Typhlomolge robusta (Amphibia: Plethodontidae)
-
POTTER, F. E., JR., AND S. S. SWEET. 1981. Generic boundaries in Texas cave salamanders, and a redescription of Typhlomolge robusta (Amphibia: Plethodontidae). Copeia 1981:64-75.
-
(1981)
Copeia
, vol.1981
, pp. 64-75
-
-
Potter F.E., Jr.1
Sweet, S.S.2
-
73
-
-
0033447974
-
Incongruence between morphological data sets: An example from the evolution of endoparasitism among parasitic wasps (Hymenoptera: Braconidae)
-
QUICKE, D. L. J., AND R. BELSHAW. 1999. Incongruence between morphological data sets: An example from the evolution of endoparasitism among parasitic wasps (Hymenoptera: Braconidae). Syst. Biol. 48:436-454.
-
(1999)
Syst. Biol.
, vol.48
, pp. 436-454
-
-
Quicke, D.L.J.1
Belshaw, R.2
-
75
-
-
0032766857
-
Multiple comparisons of log-likelihoods with applications to phylogenetic inference
-
SHIMODAIRA, H., AND M. HASEGAWA. 1999. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 16:1114-1116.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1114-1116
-
-
Shimodaira, H.1
Hasegawa, M.2
-
76
-
-
0002120273
-
Avian phylogeny reconstructed from comparisons of the genetic material, DNA
-
(C. Patterson, ed.). Cambridge Univ. Press, Cambridge, U.K.
-
SIBLEY, C. G., AND J. E. AHLQUIST. 1987. Avian phylogeny reconstructed from comparisons of the genetic material, DNA. Pages 95-121 in Molecules and morphology in evolution: Conflict or compromise? (C. Patterson, ed.). Cambridge Univ. Press, Cambridge, U.K.
-
(1987)
Molecules and Morphology in Evolution: Conflict or Compromise?
, pp. 95-121
-
-
Sibley, C.G.1
Ahlquist, J.E.2
-
78
-
-
0039716380
-
On the status of Eurycea pterophila (Amphibia: Plethodontidae)
-
SWEET, S. S. 1978. On the status of Eurycea pterophila (Amphibia: Plethodontidae). Herpetologica 34:101-108.
-
(1978)
Herpetologica
, vol.34
, pp. 101-108
-
-
Sweet, S.S.1
-
80
-
-
0001336205
-
Phylogeny reconstruction
-
(D. M. Hillis, C. Moritz, and B. K. Mable, eds.). Sinauer, Sunderland, Massachusetts
-
SWOFFORD, D. L., G. J. OLSEN, P. J. WADDELL, AND D. M. HILLIS. 1996. Phylogeny reconstruction. Pages 407-514 in Molecular systematics, 2nd edition (D. M. Hillis, C. Moritz, and B. K. Mable, eds.). Sinauer, Sunderland, Massachusetts.
-
(1996)
Molecular Systematics, 2nd Edition
, pp. 407-514
-
-
Swofford, D.L.1
Olsen, G.J.2
Waddell, P.J.3
Hillis, D.M.4
-
81
-
-
0001623195
-
Biogeography and evolution of morphology, breeding systems, flavonoids, and chloroplast DNA in the four Old World species of Fuchsia (Onagraceae)
-
SYTSMA, K. J., J. F. SMITH, AND P. E. BERRY. 1991. Biogeography and evolution of morphology, breeding systems, flavonoids, and chloroplast DNA in the four Old World species of Fuchsia (Onagraceae). Syst. Bot. 16:257-269.
-
(1991)
Syst. Bot.
, vol.16
, pp. 257-269
-
-
Sytsma, K.J.1
Smith, J.F.2
Berry, P.E.3
-
82
-
-
0037022361
-
Microbat paraphyly and the convergent evolution of a key innovation in the Old World rhinolophoid microbats
-
TEELING, E. C., O. MADSEN, R. A. VAN DEN BUSSCHE, W. W. DE JONG, M. J. STANHOPE, AND M. S. SPRINGER. 2002. Microbat paraphyly and the convergent evolution of a key innovation in the Old World rhinolophoid microbats. Proc. Natl. Acad. Sci. USA 99:1431-1436.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 1431-1436
-
-
Teeling, E.C.1
Madsen, O.2
Van Den Bussche, R.A.3
De Jong, W.W.4
Stanhope, M.J.5
Springer, M.S.6
-
83
-
-
0002503301
-
A phylogenetic investigation of the inter- and intrarelationships of the Lissamphibia (Amphibia: Temnospondyli)
-
(H.-P. Schultze and L. Trueb, eds.). Cornell Univ. Press, Ithaca, New York
-
TRUEB, L., AND R. CLOUTIER. 1991. A phylogenetic investigation of the inter- and intrarelationships of the Lissamphibia (Amphibia: Temnospondyli). Pages 223-313 in Origins of the higher groups of tetrapods: Controversy and consensus (H.-P. Schultze and L. Trueb, eds.). Cornell Univ. Press, Ithaca, New York.
-
(1991)
Origins of the Higher Groups of Tetrapods: Controversy and Consensus
, pp. 223-313
-
-
Trueb, L.1
Cloutier, R.2
-
84
-
-
0003026945
-
Comparative osteology and evolution of the lungless salamanders, family Plethodontidae
-
WAKE, D. B. 1966. Comparative osteology and evolution of the lungless salamanders, family Plethodontidae. Mem. South. Calif. Acad. Sci. 4:1-111.
-
(1966)
Mem. South. Calif. Acad. Sci.
, vol.4
, pp. 1-111
-
-
Wake, D.B.1
-
85
-
-
0026273335
-
Homoplasy: The result of natural selection or evidence of design limitations?
-
WAKE, D. B. 1991. Homoplasy: The result of natural selection or evidence of design limitations? Am. Nat. 138:543-567.
-
(1991)
Am. Nat.
, vol.138
, pp. 543-567
-
-
Wake, D.B.1
-
86
-
-
0020519413
-
On the problem of stasis in organismal evolution
-
WAKE, D. B., G. ROTH, AND M. WAKE. 1983. On the problem of stasis in organismal evolution. J. Theor. Biol. 101:211-224.
-
(1983)
J. Theor. Biol.
, vol.101
, pp. 211-224
-
-
Wake, D.B.1
Roth, G.2
Wake, M.3
-
87
-
-
0036909621
-
Phylogenies and community ecology
-
WEBB, C. O., D. D. ACKERLY, M. A. MCPEEK, AND M. J. DONOGHUE. 2002. Phylogenies and community ecology. Annu. Rev. Ecol. Syst. 33:475-505.
-
(2002)
Annu. Rev. Ecol. Syst.
, vol.33
, pp. 475-505
-
-
Webb, C.O.1
Ackerly, D.D.2
McPeek, M.A.3
Donoghue, M.J.4
-
88
-
-
11944270728
-
Polymorphic characters in phylogenetic systematics
-
WIENS, J. J. 1995. Polymorphic characters in phylogenetic systematics. Syst. Biol. 44:482-500.
-
(1995)
Syst. Biol.
, vol.44
, pp. 482-500
-
-
Wiens, J.J.1
-
89
-
-
0032351679
-
Testing phylogenetic methods with tree-congruence: Phylogenetic analysis of polymorphic morphological characters in phrynosomatid lizards
-
WIENS, J. J. 1998a. Testing phylogenetic methods with tree-congruence: Phylogenetic analysis of polymorphic morphological characters in phrynosomatid lizards. Syst. Biol. 47:427-444.
-
(1998)
Syst. Biol.
, vol.47
, pp. 427-444
-
-
Wiens, J.J.1
-
90
-
-
0032226105
-
Combining data sets with different phylogenetic histories
-
WIENS, J. J. 1998b. Combining data sets with different phylogenetic histories. Syst. Biol. 47:568-581.
-
(1998)
Syst. Biol.
, vol.47
, pp. 568-581
-
-
Wiens, J.J.1
-
91
-
-
0033826678
-
Reconstructing phylogenies from allozyme data: Testing method performance with congruence
-
WIENS, J. J. 2000. Reconstructing phylogenies from allozyme data: Testing method performance with congruence. Biol. J. Linn. Soc. 70:613-632.
-
(2000)
Biol. J. Linn. Soc.
, vol.70
, pp. 613-632
-
-
Wiens, J.J.1
-
92
-
-
0035527365
-
Character analysis in morphological phylogenetics: Problems and solutions
-
WIENS, J. J. 2001. Character analysis in morphological phylogenetics: Problems and solutions. Syst. Biol. 50:688-699.
-
(2001)
Syst. Biol.
, vol.50
, pp. 688-699
-
-
Wiens, J.J.1
-
93
-
-
0031484624
-
Accuracy of phylogenetic analysis including and excluding polymorphic characters
-
WIENS, J. J., AND M. R. SERVEDIO. 1997. Accuracy of phylogenetic analysis including and excluding polymorphic characters. Syst. Biol. 46:332-345.
-
(1997)
Syst. Biol.
, vol.46
, pp. 332-345
-
-
Wiens, J.J.1
Servedio, M.R.2
-
94
-
-
0032095587
-
Phylogenetic analysis and intraspecific variation: Performance of parsimony, likelihood, and distance methods
-
WIENS, J. J., AND M. R. SERVEDIO. 1998. Phylogenetic analysis and intraspecific variation: Performance of parsimony, likelihood, and distance methods. Syst. Biol. 47:228-253.
-
(1998)
Syst. Biol.
, vol.47
, pp. 228-253
-
-
Wiens, J.J.1
Servedio, M.R.2
-
96
-
-
0034350323
-
Phylogenetic relationships among phrynosomatid sand lizards inferred from mitochondrial DNA sequences generated by heterogeneous evolutionary processes
-
WILGENBUSCH, J., AND K. DE QUEIROZ. 2000. Phylogenetic relationships among phrynosomatid sand lizards inferred from mitochondrial DNA sequences generated by heterogeneous evolutionary processes. Syst. Biol. 49:592-612.
-
(2000)
Syst. Biol.
, vol.49
, pp. 592-612
-
-
Wilgenbusch, J.1
De Queiroz, K.2
-
97
-
-
0000561616
-
Evolution and genetics of epigean and cave Astyanax fasciatus (Characidae, Pisces). Support for the neutral mutation theory
-
WILKENS, H. 1988. Evolution and genetics of epigean and cave Astyanax fasciatus (Characidae, Pisces). Support for the neutral mutation theory. Evol. Biol. 23:271-367.
-
(1988)
Evol. Biol.
, vol.23
, pp. 271-367
-
-
Wilkens, H.1
|