The genome sequence of Blochmannia floridanus: Comparative analysis of reduced genomes

Proceedings of the National Academy of Sciences of the United States of America

Volumn 100, Issue 16, 2003, Pages 9388-9393

  Gil, Rosario ^a   Silva, Francisco J ^a   Zientz, Evelyn ^b   Delmotte, François ^a,e   González Candelas, Fernando ^a   Latorre, Amparo ^a   Rausell, Carolina ^a,f   Kamerbeek, Judith ^d,g   Gadau, Jürgen ^c   Hölldobler, Bert ^c   Van Ham, Roeland C H J ^d,h   Gross, Roy ^b   Moya, Andrés ^a  

^a UNIVERSITY OF VALENCIA   (Spain)

^b Biozentrum der Univessitat Wurzburg   (Germany)

^c UNIVERSITY OF WÜRZBURG   (Germany)

^d CENTRO DE ASTROBIOLOGÍA CSIC INTA   (Spain)

^e CEMAGREF   (France)

^f INSTITUTO DE BIOTECNOLOGÍA   (Mexico)

^g KEYGENE N V   (Netherlands)

^h WAGENINGEN UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

NITROGEN; SULFUR;

ANT; ARTICLE; BACTERIAL GENOME; BACTERIUM; BLOCHMANNIA FLORIDANUS; BUCHNERA; ENDOSYMBIONT; ENDOSYMBIOSIS; GENE SEQUENCE; GENOME ANALYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ANALYSIS;

ANIMALS; GAMMAPROTEOBACTERIA; GENOME, BACTERIAL; INSECTS; MODELS, BIOLOGICAL; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; PHYLOGENY; SEQUENCE ANALYSIS, DNA;

BACTERIA (MICROORGANISMS); BUCHNERA APHIDICOLA; CAMPONOTUS; CANDIDATUS BLOCHMANNIA; CANDIDATUS BLOCHMANNIA FLORIDANUS; FORMICIDAE; HEXAPODA; INSECTA; NEGIBACTERIA; PROKARYOTA; WIGGLESWORTHIA GLOSSINIDIA;

EID: 0041422250     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.1533499100     Document Type: Article

References (55)

1. Margulis, L. & Fester, R., eds. (1991) Symbiosis as a Source of Evolutionary Innovation (MIT Press, Cambridge, MA).
2. Buchner, P. (1965) Endosymbiosis of Animals with Plant Microorganisms (Interscience, New York).
3. Moran, N. A. & Telang, A. (1998) BioScience 48, 295-304.
4. Baumann, P., Moran, N. A. & Baumann, L. (2000) in The Prokaryotes, ed. Dworkin, M. (Springer, New York).
5. Moran, N. A. (1996) Proc. Natl. Acad. Sci. USA 93, 2873-2878.
6. Silva, F. J., Latorre, A. & Moya, A. (2001) Trends Genet. 17, 615-618.
7. Gil, R., Sabater-Muñoz, B., Latorre, A., Silva, F. J. & Moya, A. (2002) Proc. Natl. Acad. Sci. USA 99, 4454-4458.
8. Blochmann, F. (1892) Zentralbl. Bakteriol. Mikrobiol. Hyg. Ser. A 11, 234-240.
9. Sauer, C., Stackebrandt, E., Gadau, J., Hölldobler, B. & Gross, R. (2000) Int. J. Syst. Evol. Microbiol. 50, 1877-1886.
10. Pfeiffer, M. & Linsenmair, K. E. (2000) Insectes Soc. 47, 123-132.
11. Sauer, C., Dudaczek, D., Hölldobler, B. & Gross, R. (2002) Appl. Environ. Microbiol. 68, 4187-4193.
12. Harrison, C. P., Douglas, A. E. & Dixon, A. F. G. J. (1989) Invertebr. Pathol. 53, 427-428.
13. Sambrook, J., Fritsch, E. F. & Maniatis, T., eds. (1989) Molecular Cloning: A Laboratory Manual (Cold Spring Harbor Lab. Press, Plainview, NY).
14. van Ham, R. C. H. J., Kamerbeek, J, Palacios, C., Rausell, C., Abascal, F., Bastolla, U., Fernández, J. M., Jiménez, L., Postigo, M., Silva, F. J., et al. (2003) Proc. Natl. Acad. Sci. USA 100, 581-586.
15. Staden, R., Beal, K. F. & Bonfield, J. K. (1998) in Bioinformatics: Methods and Protocols, eds. Misener, S. & Krawetz, S. A. (Humana, Totowa, NJ), Vol. 132, pp. 115-130.
16. Delcher, A. L., Harmon, D., Kasif, S., White, O. & Salzberg, S. L. (1999) Nucleic Acids Res. 27, 4636-4641.
17. Lukashin, A. & Borodovsky, M. (1998) Nucleic Acids Res. 26, 1107-1115.
18. Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997) Nucleic Acids Res. 25, 3389-3402.
19. Thompson, J. D., Higgins, D. G. & Gibson., T. J. (1994) Nucleic Acids Res. 22, 4673-4680.
20. Lowe, T. M. & Eddy, S. R. (1997) Nucleic Acids Res. 25, 955-964.
21. Fares, M. A., Barrio, E., Sabater Muñoz, B. & Moya, A. (2002) Mol. Biol. Evol. 19, 1162-1170.
22. Abril, J. F. & Guigó, R. (2000) Bioinformatics 16, 743-744.
23. Tatusov, R. L., Natale, D. A., Garkavtsev, I. V., Tatusova, T. A., Shankavaram, U. T., Rao, B. S., Kiryutin, B., Galperin, M. Y., Fedorova, N. D. & Koonin, E. V. (2001) Nucleic Acids Res. 29, 22-28.
24. Riley, M. & Labedan, B. (1996) in Escherichia coli and Salmonella, ed. Neitdhardt, F. C. (Am. Sec. Microbiol., Washington, DC), pp. 2118-2202.
25. Ogata, H., Goto, S., Sato, K., Fujibuchi, W., Bono, H. & Kanehisa, M. (1999) Nucleic Acids Res. 27, 29-34.
26. Frank, C. A. & Lobry, J. R. (2000) Bioinformatics 16, 560-561.
27. Tillier, E. R. & Collins, R. A. (2000) Nat. Genet. 26, 195-197.
28. Fares, M. A., Ruiz González, M. X., Moya, A., Elena, S. F. & Barrio, E. (2002) Nature 417, 398.
29. Castresana, J. (2000) Mol. Biol. Evol. 17, 540-552.
30. Schmidt, H. A., Strimmer, K., Vingron, M. & von Haeseler, A. (2002) Bioinformatics 18, 502-504.
31. Muller, T., Spang, R. & Vingron, M. (2002) Mol. Biol. Evol. 19, 8-13.
32. Huelsenbeck, J. P. & Ronquist, F. (2001) Bioinformatics 17, 754-755.
33. Jones, D. T., Taylor, W. R. & Thornton, J. M. (1992) Comput. Appl. Biosci. 8, 275-282.
34. Shigenobu, S., Watanabe, H., Hattori, M., Sakaki, Y. & Ishikawa, H. (2000) Nature 407, 81-86.
35. Tamas, I., Klasson, L., Canbäck, B., Näslung, A. K., Eriksson, A. S., Wernegreen, J. J., Sandström, J. P., Moran, N. A. & Andersson, S. G. E. (2002) Science 296, 2376-2379.
36. Akman, L., Yamashita, A. Watanabe, H., Oshima, K., Shiba, T., Hattori, M. & Aksoy, S. (2002) Nat. Genet. 32, 402-407.
37. Blattner, F. R., Plunkett, G., III, Bloch, C. A., Perna, N. T., Burland, V., Riley, M., Collado-Vides, J., Glasner, J. D., Rode, C. K., Mayhew, G. F., et al. (1997) Science 277, 1453-1474.
38. Kogoma, T. (1997) Microbiol. Mol. Biol. Rev. 61, 212-238.
39. Schröder, D., Deppisch, H., Obermayer, M., Krohne, G., Stackebrant, E., Hölldobler, B., Goebel, W. & Gross, R. (1996) Mol. Microbiol. 21, 479-489.
40. Reinhardt, C., Steiger, R. & Hecker, H. (1972) Acta Trop. 29, 280-288.
41. Patzer, S. I. & Hantke, K. (2000) J. Biol. Chem. 275, 24321-24332.
42. Schell, M. A. (1993) Annu. Rev. Microbiol. 47, 597-626.
43. Sulavik, M. C., Gambino, L. F. & Miller, P. F. (1995) Mol. Med. 1, 436-446.
44. Spory, A., Bosserhoff, A., von Rhein, C., Goebel, W. & Ludwing, A. (2002) J. Bacteriol. 184, 3549-3559.
45. Yakushi, T., Masuda, K., Narita, S., Matsuyama, S. & Tokuda, H. (2000) Nat. Cell Biol. 2, 212-218.
46. Lazzaroni, J. C., Germon, P., Ray, M. C. & Vianney, A. (1999) FEMS Microbiol. Lett. 177, 191-197.
47. Sturgis, J. N. (2001) J. Mol. Biotechnol. 3, 113-122.
48. Goetz M., Bubert, A., Wang, G., Chico-Valero, I., Vazquez-Boland, J. A., Beck, M., Slaghuis, J., Szalay, A. A. & Goebel, W. (2001) Proc. Natl. Acad. Sci. USA. 98, 12221-12226.
49. Young, G. M., Schmiel, D. H. & Miller, V. L. (1999) Proc. Natl. Acad. Sci. USA 96, 6456-6461.
50. Wigglesworth, W. B. (1934) The Principles of Insect Physiology (Methuen, London).
51. Collins, C. M. & D'Orazio, S. E. (1993) Mol. Microbiol. 9, 907-913.
52. Sirko, A., Zatyka, M., Sadowy, E. & Hulanicka, D. (1995) J. Bacteriol. 177, 4134-4136.
53. Fraser, C. M., Gocayne, J. D., White, O., Adams, M. D., Clayton, R. A., Fleischmann, R. D., Bult, C. J., Kerlavage, A. R., Sutton, G., Kelley, J. M., et al. (1995) Science 270, 397-403.
54. Itoh, T., Martin, W. & Nei, M. (2002) Proc. Natl. Acad. Sci. USA 99, 12944-12948.
55. Hartl, D. L. & Taubes, C. H. (1996) J. Theor. Biol. 182, 303-309.