-
1
-
-
12044252858
-
Methodological advances in protein NMR
-
Bax A., Grzesiek S. Methodological advances in protein NMR. Acc. Chem. Res. 26:1993;131-138.
-
(1993)
Acc. Chem. Res.
, vol.26
, pp. 131-138
-
-
Bax, A.1
Grzesiek, S.2
-
2
-
-
0028673482
-
Measurement of homonuclear and heteronuclear J-couplings from quantitative J-correlation
-
Bax A., Vuister G.W., Grzesiek S., Delaglio F., Wang A.C., Tschudin R., Zhu G. Measurement of homonuclear and heteronuclear J-couplings from quantitative J-correlation. Methods Enzymol. 239:1994;79-105.
-
(1994)
Methods Enzymol.
, vol.239
, pp. 79-105
-
-
Bax, A.1
Vuister, G.W.2
Grzesiek, S.3
Delaglio, F.4
Wang, A.C.5
Tschudin, R.6
Zhu, G.7
-
3
-
-
0030052841
-
Surface hydrophobic residues of multiubiquitin chains essential for proteolytic targeting
-
Beal R., Deveraux Q., Xia G., Rechsteiner M., Pickart C. Surface hydrophobic residues of multiubiquitin chains essential for proteolytic targeting. Proc. Natl. Acad. Sci. USA. 93:1996;861-866.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 861-866
-
-
Beal, R.1
Deveraux, Q.2
Xia, G.3
Rechsteiner, M.4
Pickart, C.5
-
4
-
-
0035034417
-
UBA domains of DNA damage-inducible proteins interact with ubiquitin
-
Bertolaet B.L., Clarke D.J., Wolff M., Watson M.H., Henze M., Divita G., Reed S.I. UBA domains of DNA damage-inducible proteins interact with ubiquitin. Nat. Struct. Biol. 8:2001;417-422.
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 417-422
-
-
Bertolaet, B.L.1
Clarke, D.J.2
Wolff, M.3
Watson, M.H.4
Henze, M.5
Divita, G.6
Reed, S.I.7
-
5
-
-
0030666729
-
Role of Cue1p in ubiquitination and degradation at the ER surface
-
Biederer T., Volkwein C., Sommer T. Role of Cue1p in ubiquitination and degradation at the ER surface. Science. 278:1997;1806-1809.
-
(1997)
Science
, vol.278
, pp. 1806-1809
-
-
Biederer, T.1
Volkwein, C.2
Sommer, T.3
-
6
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brünger A.T., Adams P.D., Clore G.M., DeLano W.L., Gros P., Grosse-Kunstleve R.W., Jiang J.S., Kuszewski J., Nilges M., Pannu N.S.et al. Crystallography & NMR system. a new software suite for macromolecular structure determination Acta Crystallogr. D Biol. Crystallogr. 54:1998;905-921.
-
(1998)
Acta Crystallogr. D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
-
7
-
-
85031163275
-
Ribbons
-
B. Part. San Diego: Academic Press, Inc. 493-505.pp
-
Carson M. Ribbons. Part B. Macromolecular Crystallography. 1997;Academic Press, Inc, San Diego. 493-505.pp.
-
(1997)
Macromolecular Crystallography
-
-
Carson, M.1
-
8
-
-
0024514688
-
A multiubiquitin chain is confined to specific lysine in a targeted short-lived protein
-
Chau V., Tobias J.W., Bachmair A., Marriott D., Ecker D.J., Gonda D.K., Varshavsky A. A multiubiquitin chain is confined to specific lysine in a targeted short-lived protein. Science. 243:1989;1576-1583.
-
(1989)
Science
, vol.243
, pp. 1576-1583
-
-
Chau, V.1
Tobias, J.W.2
Bachmair, A.3
Marriott, D.4
Ecker, D.J.5
Gonda, D.K.6
Varshavsky, A.7
-
9
-
-
0034762028
-
Ubiquitin-associated (UBA) domains in Rad23 bind ubiquitin and promote inhibition of multi-ubiquitin chain assembly
-
Chen L., Shinde U., Ortolan T.G., Madura K. Ubiquitin-associated (UBA) domains in Rad23 bind ubiquitin and promote inhibition of multi-ubiquitin chain assembly. EMBO Rep. 2:2001;933-938.
-
(2001)
EMBO Rep.
, vol.2
, pp. 933-938
-
-
Chen, L.1
Shinde, U.2
Ortolan, T.G.3
Madura, K.4
-
10
-
-
0037123605
-
Emerging roles of ubiquitin in transcription regulation
-
Conaway R.C., Brower C.S., Conaway J.W. Emerging roles of ubiquitin in transcription regulation. Science. 296:2002;1254-1258.
-
(2002)
Science
, vol.296
, pp. 1254-1258
-
-
Conaway, R.C.1
Brower, C.S.2
Conaway, J.W.3
-
11
-
-
0033003335
-
Protein backbone angle restraints from searching a database for chemical shift and sequence homology
-
Cornilescu G., Delaglio F., Bax A. Protein backbone angle restraints from searching a database for chemical shift and sequence homology. J. Biomol. NMR. 13:1999;289-302.
-
(1999)
J. Biomol. NMR
, vol.13
, pp. 289-302
-
-
Cornilescu, G.1
Delaglio, F.2
Bax, A.3
-
12
-
-
0031730342
-
Structure of a human DNA repair protein UBA domain that interacts with HIV-1 Vpr
-
Dieckmann T., Withers-Ward E.S., Jarosinski M.A., Liu C.F., Chen I.S., Feigon J. Structure of a human DNA repair protein UBA domain that interacts with HIV-1 Vpr. Nat. Struct. Biol. 5:1998;1042-1047.
-
(1998)
Nat. Struct. Biol.
, vol.5
, pp. 1042-1047
-
-
Dieckmann, T.1
Withers-Ward, E.S.2
Jarosinski, M.A.3
Liu, C.F.4
Chen, I.S.5
Feigon, J.6
-
13
-
-
0037316409
-
Ubiquitin signals protein trafficking via interaction with a novel ubiquitin binding domain in the membrane fusion regulator, Vps9p
-
Donaldson K.M., Yin H., Gekakis N., Supek F., Joazeiro C.A. Ubiquitin signals protein trafficking via interaction with a novel ubiquitin binding domain in the membrane fusion regulator, Vps9p. Curr. Biol. 13:2003;258-262.
-
(2003)
Curr. Biol.
, vol.13
, pp. 258-262
-
-
Donaldson, K.M.1
Yin, H.2
Gekakis, N.3
Supek, F.4
Joazeiro, C.A.5
-
14
-
-
0033794003
-
NMR spectroscopy: A multifaceted approach to macromolecular structure
-
Ferentz A.E., Wagner G. NMR spectroscopy. a multifaceted approach to macromolecular structure Q. Rev. Biophys. 33:2000;29-65.
-
(2000)
Q. Rev. Biophys.
, vol.33
, pp. 29-65
-
-
Ferentz, A.E.1
Wagner, G.2
-
15
-
-
0035105291
-
Interaction of the Fanconi anemia proteins and BRCA1 in a common pathway
-
Garcia-Higuera I., Taniguchi T., Ganesan S., Meyn M.S., Timmers C., Hejna J., Grompe M., D'Andrea A.D. Interaction of the Fanconi anemia proteins and BRCA1 in a common pathway. Mol. Cell. 7:2001;249-262.
-
(2001)
Mol. Cell
, vol.7
, pp. 249-262
-
-
Garcia-Higuera, I.1
Taniguchi, T.2
Ganesan, S.3
Meyn, M.S.4
Timmers, C.5
Hejna, J.6
Grompe, M.7
D'Andrea, A.D.8
-
16
-
-
0024448151
-
Calculation of protein extinction coefficients from amino acid sequence data
-
Gill S.C., von Hippel P.H. Calculation of protein extinction coefficients from amino acid sequence data. Anal. Biochem. 182:1989;319-326.
-
(1989)
Anal. Biochem.
, vol.182
, pp. 319-326
-
-
Gill, S.C.1
Von Hippel, P.H.2
-
18
-
-
0035823032
-
A new ticket for entry into budding vesicles-ubiquitin
-
Hicke L. A new ticket for entry into budding vesicles-ubiquitin. Cell. 106:2001;527-530.
-
(2001)
Cell
, vol.106
, pp. 527-530
-
-
Hicke, L.1
-
19
-
-
85047669941
-
The UBA domain: A sequence motif present in multiple enzyme classes of the ubiquitination pathway
-
Hofmann K., Bucher P. The UBA domain. a sequence motif present in multiple enzyme classes of the ubiquitination pathway Trends Biochem. Sci. 21:1996;172-173.
-
(1996)
Trends Biochem. Sci.
, vol.21
, pp. 172-173
-
-
Hofmann, K.1
Bucher, P.2
-
20
-
-
0035369556
-
A ubiquitin-interacting motif conserved in components of the proteasomal and lysosomal protein degradation systems
-
Hofmann K., Falquet L. A ubiquitin-interacting motif conserved in components of the proteasomal and lysosomal protein degradation systems. Trends Biochem. Sci. 26:2001;347-350.
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 347-350
-
-
Hofmann, K.1
Falquet, L.2
-
21
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
Holm L., Sander C. Protein structure comparison by alignment of distance matrices. J. Mol. Biol. 233:1993;123-138.
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
23
-
-
0037163084
-
A ubiquitin-interacting motif (UIM) is essential for Eps15 and Eps15R ubiquitination
-
Klapisz E., Sorokina I., Lemeer S., Pijnenburg M., Verkleij A.J., van Bergen en Henegouwen P.M. A ubiquitin-interacting motif (UIM) is essential for Eps15 and Eps15R ubiquitination. J. Biol. Chem. 277:2002;30746-30753.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 30746-30753
-
-
Klapisz, E.1
Sorokina, I.2
Lemeer, S.3
Pijnenburg, M.4
Verkleij, A.J.5
Van Bergen en Henegouwen, P.M.6
-
24
-
-
0030339738
-
Aqua and procheck-nmr: Programs for checking the quality of protein structures solved by nmr
-
Laskowski R.A., Rullmann J.A., MacArthur M.W., Kaptein R., Thornton J.M. Aqua and procheck-nmr. programs for checking the quality of protein structures solved by nmr J. Biomol. NMR. 8:1996;477-486.
-
(1996)
J. Biomol. NMR
, vol.8
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmann, J.A.2
MacArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
25
-
-
0033029875
-
Assessing potential bias in the determination of rotational correlation times of proteins by NMR relaxation
-
Lee A.L., Wand A.J. Assessing potential bias in the determination of rotational correlation times of proteins by NMR relaxation. J. Biomol. NMR. 13:1999;101-112.
-
(1999)
J. Biomol. NMR
, vol.13
, pp. 101-112
-
-
Lee, A.L.1
Wand, A.J.2
-
26
-
-
0037316363
-
Aria: Automated noe assignment and nmr structure calculation
-
Linge J.P., Habeck M., Rieping W., Nilges M. Aria. automated noe assignment and nmr structure calculation Bioinformatics. 19:2003;315-316.
-
(2003)
Bioinformatics
, vol.19
, pp. 315-316
-
-
Linge, J.P.1
Habeck, M.2
Rieping, W.3
Nilges, M.4
-
27
-
-
0028304962
-
Satisfying hydrogen bonding potential in proteins
-
McDonald I.K., Thornton J.M. Satisfying hydrogen bonding potential in proteins. J. Mol. Biol. 238:1994;777-793.
-
(1994)
J. Mol. Biol.
, vol.238
, pp. 777-793
-
-
McDonald, I.K.1
Thornton, J.M.2
-
28
-
-
0036300780
-
Solution structures of UBA domains reveal a conserved hydrophobic surface for protein-protein interactions
-
Mueller T.D., Feigon J. Solution structures of UBA domains reveal a conserved hydrophobic surface for protein-protein interactions. J. Mol. Biol. 319:2002;1243-1255.
-
(2002)
J. Mol. Biol.
, vol.319
, pp. 1243-1255
-
-
Mueller, T.D.1
Feigon, J.2
-
29
-
-
0037335034
-
How the ubiquitin-proteasome system controls transcription
-
Muratani M., Tansey W.P. How the ubiquitin-proteasome system controls transcription. Nat. Rev. Mol. Cell Biol. 4:2003;192-201.
-
(2003)
Nat. Rev. Mol. Cell Biol.
, vol.4
, pp. 192-201
-
-
Muratani, M.1
Tansey, W.P.2
-
30
-
-
0026319199
-
Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons
-
Nicholls A., Sharp K.A., Honig B. Protein folding and association. insights from the interfacial and thermodynamic properties of hydrocarbons Proteins. 11:1991;281-296.
-
(1991)
Proteins
, vol.11
, pp. 281-296
-
-
Nicholls, A.1
Sharp, K.A.2
Honig, B.3
-
31
-
-
0037046805
-
The ubiquitin-interacting motifs target the endocytic adaptor protein epsin for ubiquitination
-
Oldham C.E., Mohney R.P., Miller S.L., Hanes R.N., O'Bryan J.P. The ubiquitin-interacting motifs target the endocytic adaptor protein epsin for ubiquitination. Curr. Biol. 12:2002;1112-1116.
-
(2002)
Curr. Biol.
, vol.12
, pp. 1112-1116
-
-
Oldham, C.E.1
Mohney, R.P.2
Miller, S.L.3
Hanes, R.N.4
O'Bryan, J.P.5
-
32
-
-
0025252231
-
1H]-NMR spectroscopy: Combined use with isotope labelling for studies of macromolecular conformation and intermolecular interactions
-
1H]-NMR spectroscopy. combined use with isotope labelling for studies of macromolecular conformation and intermolecular interactions Q. Rev. Biophys. 23:1990;39-96.
-
(1990)
Q. Rev. Biophys.
, vol.23
, pp. 39-96
-
-
Otting, G.1
Wüthrich, K.2
-
33
-
-
0034915764
-
Mechanisms underlying ubiquitination
-
Pickart C.M. Mechanisms underlying ubiquitination. Annu. Rev. Biochem. 70:2001;503-533.
-
(2001)
Annu. Rev. Biochem.
, vol.70
, pp. 503-533
-
-
Pickart, C.M.1
-
34
-
-
0037187597
-
A single motif responsible for ubiquitin recognition and monoubiquitination in endocytic proteins
-
Polo S., Sigismund S., Faretta M., Guidi M., Capua M.R., Bossi G., Chen H., De Camilli P., Di Fiore P.P. A single motif responsible for ubiquitin recognition and monoubiquitination in endocytic proteins. Nature. 416:2002;451-455.
-
(2002)
Nature
, vol.416
, pp. 451-455
-
-
Polo, S.1
Sigismund, S.2
Faretta, M.3
Guidi, M.4
Capua, M.R.5
Bossi, G.6
Chen, H.7
De Camilli, P.8
Di Fiore, P.P.9
-
35
-
-
0034667598
-
Proteins of the endoplasmic-reticulum-associated degradation pathway: Domain detection and function prediction
-
Ponting C.P. Proteins of the endoplasmic-reticulum-associated degradation pathway. domain detection and function prediction Biochem. J. 351:2000;527-535.
-
(2000)
Biochem. J.
, vol.351
, pp. 527-535
-
-
Ponting, C.P.1
-
37
-
-
0344527798
-
Structural analyses of CREB-CBP transcriptional activator-coactivator complexes by NMR spectroscopy: Implications for mapping the boundaries of structural domains
-
Radhakrishnan I., Perez-Alvarado G.C., Parker D., Dyson H.J., Montminy M.R., Wright P.E. Structural analyses of CREB-CBP transcriptional activator-coactivator complexes by NMR spectroscopy. implications for mapping the boundaries of structural domains J. Mol. Biol. 287:1999;859-865.
-
(1999)
J. Mol. Biol.
, vol.287
, pp. 859-865
-
-
Radhakrishnan, I.1
Perez-Alvarado, G.C.2
Parker, D.3
Dyson, H.J.4
Montminy, M.R.5
Wright, P.E.6
-
38
-
-
0036094538
-
Hrs sorts ubiquitinated proteins into clathrin-coated microdomains of early endosomes
-
Raiborg C., Bache K.G., Gillooly D.J., Madshus I.H., Stang E., Stenmark H. Hrs sorts ubiquitinated proteins into clathrin-coated microdomains of early endosomes. Nat. Cell Biol. 4:2002;394-398.
-
(2002)
Nat. Cell Biol.
, vol.4
, pp. 394-398
-
-
Raiborg, C.1
Bache, K.G.2
Gillooly, D.J.3
Madshus, I.H.4
Stang, E.5
Stenmark, H.6
-
39
-
-
0034235434
-
Ubiquitination and endocytosis of plasma membrane proteins: Role of Nedd4/Rsp5p family of ubiquitin-protein ligases
-
Rotin D., Staub O., Haguenauer-Tsapis R. Ubiquitination and endocytosis of plasma membrane proteins. role of Nedd4/Rsp5p family of ubiquitin-protein ligases J. Membr. Biol. 176:2000;1-17.
-
(2000)
J. Membr. Biol.
, vol.176
, pp. 1-17
-
-
Rotin, D.1
Staub, O.2
Haguenauer-Tsapis, R.3
-
40
-
-
0030040323
-
Reduced surface: An efficient way to compute molecular surfaces
-
Sanner M.F., Olson A.J., Spehner J.C. Reduced surface. an efficient way to compute molecular surfaces Biopolymers. 38:1996;305-320.
-
(1996)
Biopolymers
, vol.38
, pp. 305-320
-
-
Sanner, M.F.1
Olson, A.J.2
Spehner, J.C.3
-
41
-
-
0036392305
-
A ubiquitin-interacting motif from Hrs binds to and occludes the ubiquitin surface necessary for polyubiquitination in monoubiquitinated proteins
-
Shekhtman A., Cowburn D. A ubiquitin-interacting motif from Hrs binds to and occludes the ubiquitin surface necessary for polyubiquitination in monoubiquitinated proteins. Biochem. Biophys. Res. Commun. 296:2002;1222-1227.
-
(2002)
Biochem. Biophys. Res. Commun.
, vol.296
, pp. 1222-1227
-
-
Shekhtman, A.1
Cowburn, D.2
-
42
-
-
0036094688
-
Epsins and Vps27p/Hrs contain ubiquitin-binding domains that function in receptor endocytosis
-
Shih S.C., Katzmann D.J., Schnell J.D., Sutanto M., Emr S.D., Hicke L. Epsins and Vps27p/Hrs contain ubiquitin-binding domains that function in receptor endocytosis. Nat. Cell Biol. 4:2002;389-393.
-
(2002)
Nat. Cell Biol.
, vol.4
, pp. 389-393
-
-
Shih, S.C.1
Katzmann, D.J.2
Schnell, J.D.3
Sutanto, M.4
Emr, S.D.5
Hicke, L.6
-
43
-
-
0345616428
-
A ubiquitin-binding motif required for intramolecular monoubiquitylation, the CUE domain
-
Shih S.C., Prag G., Francis S.A., Sutanto M.A., Hurley J.H., Hicke L. A ubiquitin-binding motif required for intramolecular monoubiquitylation, the CUE domain. EMBO J. 22:2003;1273-1281.
-
(2003)
EMBO J.
, vol.22
, pp. 1273-1281
-
-
Shih, S.C.1
Prag, G.2
Francis, S.A.3
Sutanto, M.A.4
Hurley, J.H.5
Hicke, L.6
-
45
-
-
0036926615
-
A new vector for high-throughput, ligation-independent cloning encoding a tobacco etch virus protease cleavage site
-
Stols L., Gu M., Dieckman L., Raffen R., Collart F.R., Donnelly M.I. A new vector for high-throughput, ligation-independent cloning encoding a tobacco etch virus protease cleavage site. Protein Expr. Purif. 25:2002;8-15.
-
(2002)
Protein Expr. Purif.
, vol.25
, pp. 8-15
-
-
Stols, L.1
Gu, M.2
Dieckman, L.3
Raffen, R.4
Collart, F.R.5
Donnelly, M.I.6
-
47
-
-
0023644679
-
Structure of ubiquitin refined at 1.8 Å resolution
-
Vijay-Kumar S., Bugg C.E., Cook W.J. Structure of ubiquitin refined at 1.8 Å resolution. J. Mol. Biol. 194:1987;531-544.
-
(1987)
J. Mol. Biol.
, vol.194
, pp. 531-544
-
-
Vijay-Kumar, S.1
Bugg, C.E.2
Cook, W.J.3
-
48
-
-
0035292759
-
Themes and variations on ubiquitylation
-
Weissman A.M. Themes and variations on ubiquitylation. Nat. Rev. Mol. Cell Biol. 2:2001;169-178.
-
(2001)
Nat. Rev. Mol. Cell Biol.
, vol.2
, pp. 169-178
-
-
Weissman, A.M.1
-
49
-
-
0034798985
-
Proteins containing the UBA domain are able to bind to multi-ubiquitin chains
-
Wilkinson C.R., Seeger M., Hartmann-Petersen R., Stone M., Wallace M., Semple C., Gordon C. Proteins containing the UBA domain are able to bind to multi-ubiquitin chains. Nat. Cell Biol. 3:2001;939-943.
-
(2001)
Nat. Cell Biol.
, vol.3
, pp. 939-943
-
-
Wilkinson, C.R.1
Seeger, M.2
Hartmann-Petersen, R.3
Stone, M.4
Wallace, M.5
Semple, C.6
Gordon, C.7
-
51
-
-
0032489524
-
Characterization of two polyubiquitin binding sites in the 26 S protease subunit 5a
-
Young P., Deveraux Q., Beal R.E., Pickart C.M., Rechsteiner M. Characterization of two polyubiquitin binding sites in the 26 S protease subunit 5a. J. Biol. Chem. 273:1998;5461-5467.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 5461-5467
-
-
Young, P.1
Deveraux, Q.2
Beal, R.E.3
Pickart, C.M.4
Rechsteiner, M.5
-
52
-
-
0030808350
-
Methods for measurement of intermolecular NOEs by multinuclear NMR spectroscopy: Application to a bacteriophage lambda N-peptide/boxB RNA complex
-
Zwahlen C., Legault P., Vincent S.J.F., Greenblatt J., Konrat R., Kay L.E. Methods for measurement of intermolecular NOEs by multinuclear NMR spectroscopy. application to a bacteriophage lambda N-peptide/boxB RNA complex J. Am. Chem. Soc. 119:1997;6711-6721.
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 6711-6721
-
-
Zwahlen, C.1
Legault, P.2
Vincent, S.J.F.3
Greenblatt, J.4
Konrat, R.5
Kay, L.E.6
|