Effect of histone deacetylase inhibitors on heat shock protein gene expression during Xenopus development

Genesis (United States)

Volumn 36, Issue 2, 2003, Pages 88-96

  Ovakim, Daniel H ^a   Heikkila, John J ^a  

^a UNIVERSITY OF WATERLOO   (Canada)

Author keywords

Acetylation; Chromatin; In situ; Messenger RNA

Indexed keywords

HEAT SHOCK PROTEIN; HISTONE DEACETYLASE INHIBITOR; MESSENGER RNA;

ACETYLATION; ARTICLE; BINDING SITE; BIOACCUMULATION; CONTROLLED STUDY; DRUG EFFECT; EMBRYO; GASTRULA; GENE EXPRESSION; GENE REPRESSION; IN SITU HYBRIDIZATION; NONHUMAN; NORTHERN BLOTTING; PRIORITY JOURNAL; PROTEIN EXPRESSION; REGULATORY MECHANISM; STRESS; XENOPUS LAEVIS;

XENOPUS; XENOPUS LAEVIS;

EID: 0038692918     PISSN: 1526954X     EISSN: None     Source Type: Journal    
DOI: 10.1002/gene.10202     Document Type: Article

References (68)

1. Ahringer J. 2000. NuRD and SIN3: histone deacetylase complexes in development. Trends Genet 16:351-356.
2. Ali A, Krone P, Heikkila JJ. 1993. Expression of endogenous and microinjected hsp30 genes in early Xenopus laevis embryos. Dev Genet 14:42-50.
3. Ali A, Salter-Cid L, Flajnik MF, Heikkila JJ. 1996. Isolation and characterization of a cDNA encoding a Xenopus 70-kDa heat shock cognate protein, hsc70.I. Comp Biochem Physiol 113B:681-687.
4. Ali A, Fernando P, Smith WL, Ovsenek N, Lepock JR, Heikkila JJ. 1997. Preferential activation of HSF-binding activity and hsp70 gene expression in Xenopus heart after mild hyperthermia. Cell Stress Chaperones 2:229-237.
5. Alland L, Muhle R, Hou H, Potes J, Chin L, Shreiber-Agus N, DePinho RA. 1997. Role for N-CoR and histone deacetylase in Sin3-mediated transcriptional repression. Nature 387:49-55.
6. Almouzni G, Khochbin S, Dimitrov S, Wolffe AP. 1994. Histone acetylation influences both gene expression and development of Xenopus laevis. Dev Biol 165:654-669.
7. Arrigo A-P. 1998. Small stress proteins: chaperones that act as regulators of intracellular redox state and programmed cell death. J Biol Chem 379:19-26.
8. Arrigo A-P, Landry J. 1994. Expression and function of the low-molecular-weight heat shock proteins. In: Morimoto RI, Tissieres A, Georgopoulos C, editors. The biology of heat shock proteins and molecular chaperones. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press. p 335-373.
9. Ayer DE. 1999. Histone deacetylases: transcriptional repression with SINers and NuRDs. Trends Cell Biol 9:193-198.
10. Bienz M. 1984a. Developmental control of the heat shock response in Xenopus. Proc Natl Acad Sci USA 81:3138-3142.
11. Bienz M. 1984b. Xenopus hsp70 genes are constitutively expressed in injected oocytes. EMBO J 3:2477-2483.
12. Chen G, Fernandez J, Mische S, Courey AJ. 1999. A functional interaction between the histone deacetylase RPD3 and the corepressor Groucho in Drosophila development. Genes Dev 13:2218-2230.
13. Chirgwin J, Przbyla A, MacDonald R, Rutter W. 1979. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 18:5294-5299.
14. Cox JS, Chapman RE, Walter P. 1997. The unfolded protein response coordinates the production of endoplasmic reticulum protein and endoplasmic reticulum membrane. Mol Biol Cell 8:1805-1814.
15. Crowe AJ, Sang L, Li KK, Lee KC, Spear BT, Barton MC. 1999. Hepatocytes nuclear factor 3 relieves chromatin-mediated repression of the α-fetoprotein gene. J Biol Chem 274:25113-25120.
16. Damjanovski S, Sachs LM, Shi Y-B. 2001. Multiple stage-dependent roles for histone deacetylases during amphibian embryogenesis: implications for the involvement of extracellular matrix remodeling. Int J Dev Biol 44:769-776.
17. Deckert J, Struhl K. 2001. Histone acetylation at promoters is differentially affected by specific activators and repressors. Mol Cell Biol 21:2726-2735.
18. Dimitrov S, Almouzni G, Dasso M, Wolffe AP. 1993. Chromatin transitions during early Xenopus embryogenesis: changes in histone H4 acetylation and linker histone type. Dev Biol 160:214-227.
19. Drysdale TA, Patterson KD, Saha M, Krieg PA. 1997. Retinoic acid can block differentiation of the myocardium after heart specification. Dev Biol 188:205-215.
20. Ehrnsperger M, Graber S, Gaestel M, Buchner J. 1997. Binding of non-native protein to hsp25 during heat shock creates a reservoir of folding intermediates for reactivation. EMBO J 16:221-229.
21. Feige U, Morimoto RI, Yahara I, Polla BS. 1996. Stress-inducible cellular responses. Basel: Birkhauser.
22. Hair A, Prioleau M-N, Vassetzky Y, Mechali M. 1998. Control of gene expression in Xenopus early development. Dev Genet 22:122-131.
23. Harland RM. 1991. In situ hybridization: an improved whole-mount method for Xenopus embryos. In: Kay, BK, Peng, HB editors. Methods in cell biology, Xenopus laevis: practical uses in cell and molecular biology, vol. 36. Toronto: Academic Press. p 685-694.
24. Hartl FU. 1996. Molecular chaperones in cellular protein folding. Nature 381:571-579.
25. Heikkila JJ. 1993a. Heat shock gene expression and development. I. An overview of poikilothermic animal developmental systems. Dev Genet 14:1-5.
26. Heikkila JJ. 1993b. Heat shock gene expression and development. II. An overview of mammalian and avian developmental systems. Dev Genet 14:87-91.
27. Heikkila JJ, Kloc M, Bury J, Schultz GA, Browder L. 1985. Acquisition of the heat shock response and thermotolerance in Xenopus laevis. Dev Biol 107:483-489.
28. Heikkila JJ, Ovsenek N, Krone PH. 1987. Examination of heat shock protein mRNA accumulation in early Xenopus laevis embryos. Biochem Cell Biol 65:87-94.
29. Heikkila JJ, Ohan N, Tam Y, Ali A. 1997. Heat shock protein gene expression during Xenopus development. Cell Mol Life Sci 53:114-121.
30. Hightower L, Nover L. 1991. Heat shock and development. Heidelberg: Springer.
31. Hong L, Schroth GP, Matthews HR, Yau P, Bradbury EM. 1993. Studies of the DNA binding properties of histone H4 amino acid terminus: thermal denaturation studies reveal that acetylation markedly reduces the binding constant of the H4 tail to DNA. J Biol Chem 268:305-314.
32. Huot JF, Houle F, Spitz DR, Landry J. 1996. HSP27 phosphorylation-mediated resistance against actin fragmentation and cell death induced by oxidative stress. Cancer Res 56:273-279.
33. Jenuwein T, Allis CD. 2001. Translating the histone code. Science 293:1074-1080.
34. Kadosh D, Struhl K. 1998. Targeted recruitment of the Sin3-Rpd3 histone deacetylase complex generates a highly localized domain of repressed chromatin in vivo. Mol Cell Biol 18:5121-5127.
35. Kimelman D, Kirschner M, Scherson T. 1987. The events of the midblastula transition in Xenopus are regulated by changes in the cell cycle. Cell 48:399-407.
36. Kouzarides T. 2000. Acetylation: a regulatory modification to rival phosphorylation? EMBO J 19:1176-1179.
37. Krone PH, Heikkila JJ. 1988. Analysis of hsp 30, hsp 70, and ubiquitin gene expression in Xenopus laevis tadpoles. Development 103:59-67.
38. Krone PH, Heikkila JJ. 1989. Expression of microinjected hsp 70/CAT and hsp 30/CAT chimeric genes in developing Xenopus laevis embryos. Development 106:271-281.
39. Krone PH, Snow A, Ali A, Pasternak JJ, Heikkila JJ. 1992. Comparison of the regulatory regions of the Xenopus laevis small heat-shock protein encoding gene family. Gene 110:159-166.
40. Lang L, Miskovic D, Fernando P, Heikkila JJ. 1999. Spatial pattern of constitutive and heat shock-induced expression of the small heat shock protein gene family, hsp30, in Xenopus laevis tailbud embryos. Dev Genet 25:365-374.
41. Lang L, Miskovic D, Lo M, Heikkila JJ. 2000. Stress-induced, tissue-specific enrichment of hsp70 mRNA accumulation in Xenopus laevis embryos. Cell Stress Chaperones 5:36-44.
42. Luger K, Mader AW, Richmond RK, Sargent DF, Richmond TJ. 1997. Crystal structure of the nucleosome core particle at 2.8 angstrom resolution. Nature 389:251-260.
43. Maes J, O'Neill LP, Cavelier P, Turner BM, Rougeon F, Goodhardt M. 2001. Chromatin remodeling at the Ig loci prior to V(D)J recombination. J Immunol 167:866-874.
44. McCaffrey PG, Newsome DA, Fibach E, Yoshida M, Su MS-S. 1997. Induction of γ-globin by histone deacetylase inhibitors. Blood 90:2073-2083.
45. Miskovic D, Heikkila JJ. 1999. Constitutive and stress-inducible expression of the endoplasmic reticulum heat shock protein 70 gene Family member, immunoglobulin-binding protein (BiP), during Xenopus laevis early development. Dev Genet 25:31-39.
46. Morimoto RI. 1998. Regulation of the heat shock transcriptional response: cross talk between a family of heat shock factors, molecular chaperones, and negative regulators. Genes Dev 12:3788-3796.
47. Morimoto RI, Tissieres A, Georgopoulos C. 1994. The biology of heat shock proteins and molecular chaperones. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
48. Ng HH, Bird A. 2000. Histone deacetylases: silencers for hire. Trends Biochem Sci 25:121-126.
49. Nieuwkoop PD, Faber J. 1967. Normal table of Xenopus laevis (Daudin). Amsterdam: North Holland.
50. Nightingale KP, Wellinger RE, Sogo JM, Becker PB. 1998. Histone acetylation facilitates RNA polymerase II transcription of the Drosophila hsp26 gene in chromatin. EMBO J 17:2865-2876.
51. Ovsenek N, Heikkila JJ. 1990. DNA sequence-specific binding activity of the heat shock transcription factor is heat-inducible before the midblastula transition of early Xenopus development. Development 110:427-433.
52. Parsell DA, Linquist S. 1994. The function of heat shock proteins in stress tolerance: degradation and reactivation of damaged proteins. Annu Rev Genet 27:437-496.
53. Pheil CJ, Zhang F, Huang EY, Guenther MG, Lazar MA, Klein PS. 2001. Histone deacetylase is a direct target of valproic acid, a potent anticonvulsant, mood stabilizer, and teratogen. J Biol Chem 276:36734-36741.
54. Pile LA, Wasserman DA. 2000. Chromosomal localization links the SIN3-RPD3 complex to the regulation of chromatin condensation, histone acetylation and gene expression. EMBO J 19:6131-6140.
55. Rao S, Procko E, Shannon MF. 2001. Chromatin remodeling, measured by a novel real-time polymerase chain reaction assay, across proximal promoter region of the IL-2 gene. J Immunol 167:4494-4503.
56. Rundlett SE, Carmen AA, Suka N, Turner BM, Grunstein M. 1998. Transcription repression by Ume6 involves deacetylation of lysine 5 of histone H4 by Rpd3. Nature 392:831-835.
57. Sachs LM, Amano T, Shi Y-B. 2001. An essential role of histone deacetylases in postembryonic organ transformations in Xenopus laevis. Int J Mol Med 8:595-601.
58. Sambrook J, Fritisch EF, Maniatis T. 1989. Molecular cloning: a laboratory manual. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
59. Shestakova E, Bandu M-T, Doly J, Bonnefoy E. 2001. Inhibition of histone deacetylation induces constitutive derepression of the β-interferon promoter and confers antiviral activity. J Virol 75:3444-3452.
60. Spencer VA, Davie JR. 1999. Role of covalent modifications of histones in regulating gene expression. Gene 240:1-12.
61. Stein GS, Van Wijnen AJ, Montecino N, Stein JL, Lian JB. 1999. Nuclear structure/gene expression interrelationships. J Cell Biol 181:240-250.
62. Sterner DE, Berger SL. 2000. Acetylation of histones and transcription-related factors. Microbiol Mol Biol Rev 64:435-459.
63. Struhl K. 1998. Histone acetylation and transcriptional regulatory mechanisms. Genes Dev 12:599-606.
64. Takakura M, Kyo S, Sowa Y, Wang Z, Yatabe N, Maida Y, Tanaka M, Inoue M. 2001. Telomerase activation by histone deacetylase inhibitor in normal cells. Nucl Acids Res 29:3006-3011.
65. Tam Y, Heikkila JJ. 1995. Identification of members of the hsp30 small heat shock protein family and characterization of their developmental regulation in heat-shocked Xenopus laevis embryos. Dev Genet 17:331-339.
66. Waters E, Lee G, Vierling E. 1996. Evolution, structure and function of the small heat shock proteins in plants. J Exp Biol 47:325-338.
67. Wolffe AP, Guschin D. 2000. Chromatin structural features and targets that regulate transcription. J Struc Biol 129:102-122.
68. Yoshida M, Kikima M, Akita M, Beppu T. 1990. Potent and specific inhibition of mammalian histone deacetylase both in vivo and in vitro by trichostatin A. J Biol Chem 265:17174-17179.