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Volumn 5, Issue 2, 2003, Pages 104-112

Predicting HIV-1 coreceptor usage with sequence analysis

Author keywords

Envelope; HIV coreceptor; HIV phenotype; Pathogenesis

Indexed keywords

AMINO ACID; ANTIRETROVIRUS AGENT; CHEMOKINE RECEPTOR CCR4; CHEMOKINE RECEPTOR CCR5; HUMAN IMMUNODEFICIENCY VIRUS 1 CORECEPTOR; NUCLEOSIDE ANALOG; UNCLASSIFIED DRUG; VIRUS RECEPTOR;

EID: 0038637409     PISSN: 11396121     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review
Times cited : (127)

References (85)
  • 1
    • 0026533899 scopus 로고
    • HIV-1 biological phenotype in long-term infected individuals evaluated with an MT-2 cocultivation assay
    • Koot M, Vos A, Keet R, et al. HIV-1 biological phenotype in long-term infected individuals evaluated with an MT-2 cocultivation assay. AIDS 1992;6:49-54.
    • (1992) AIDS , vol.6 , pp. 49-54
    • Koot, M.1    Vos, A.2    Keet, R.3
  • 2
    • 0024416659 scopus 로고
    • Infection of monocyte-derived macrophages with HIV-1. Monocyte-tropic and lymphocyte-tropic strains of HIV-1 show distinctive patterns of replication in a panel of cell types
    • Collman R, Hassan N, Walker R, et al. Infection of monocyte-derived macrophages with HIV-1. Monocyte-tropic and lymphocyte-tropic strains of HIV-1 show distinctive patterns of replication in a panel of cell types. J Exp Med 1989;170:1149-63.
    • (1989) J Exp Med , vol.170 , pp. 1149-1163
    • Collman, R.1    Hassan, N.2    Walker, R.3
  • 3
    • 0024816426 scopus 로고
    • Replicative capacity, cytopathic effect and cell tropism of HIV
    • Fenyö E, Albert J, Åsjö B. Replicative capacity, cytopathic effect and cell tropism of HIV. AIDS 1989;3(Suppl. 1):5-12.
    • (1989) AIDS , vol.3 , Issue.SUPPL. 1 , pp. 5-12
    • Fenyö, E.1    Albert, J.2    Åsjö, B.3
  • 4
    • 0023896246 scopus 로고
    • Differential syncytium-inducing capacity of HIV isolates: Frequent detection of syncytium-inducing isolates in patients with AIDS and AIDS-related complex
    • Tersmette M, De Goede R, Al B, et al. Differential syncytium-inducing capacity of HIV isolates: Frequent detection of syncytium-inducing isolates in patients with AIDS and AIDS-related complex. J Virol 1988;62:2026-32.
    • (1988) J Virol , vol.62 , pp. 2026-2032
    • Tersmette, M.1    De Goede, R.2    Al, B.3
  • 5
    • 0026070668 scopus 로고
    • Monocytotropic HIV-1 variants detectable in all stages of HIV-1 infection lack T-cell line tropism and syncytium-inducing ability in primary T-cell culture
    • Schuitemaker H, Kootstra N, De Goede R, et al. Monocytotropic HIV-1 variants detectable in all stages of HIV-1 infection lack T-cell line tropism and syncytium-inducing ability in primary T-cell culture. J Virol 1991;65:356-63.
    • (1991) J Virol , vol.65 , pp. 356-363
    • Schuitemaker, H.1    Kootstra, N.2    De Goede, R.3
  • 6
    • 0026599703 scopus 로고
    • Viral phenotype and immune response in primary HIV type 1 infection
    • Roos M, Lange J, De Goede R, et al. Viral phenotype and immune response in primary HIV type 1 infection. J Infect Dis 1992;165:427-32.
    • (1992) J Infect Dis , vol.165 , pp. 427-432
    • Roos, M.1    Lange, J.2    De Goede, R.3
  • 7
    • 0027406242 scopus 로고
    • Predictors of rapid progression to AIDS in HIV-1 seroconverters
    • Keet I, Krijnen P, Koot M, et al. Predictors of rapid progression to AIDS in HIV-1 seroconverters. AIDS 1993;7:51-7.
    • (1993) AIDS , vol.7 , pp. 51-57
    • Keet, I.1    Krijnen, P.2    Koot, M.3
  • 8
    • 0032710838 scopus 로고    scopus 로고
    • Consistent viral evolutionary changes associated with the progression of HIV type 1 infection
    • Shankarappa R, Margolick J, Gange S, et al. Consistent viral evolutionary changes associated with the progression of HIV type 1 infection. J Virol 1999;73:10489-502.
    • (1999) J Virol , vol.73 , pp. 10489-10502
    • Shankarappa, R.1    Margolick, J.2    Gange, S.3
  • 9
    • 0027537480 scopus 로고
    • Prognostic value of HIV-1 syncytium-inducing phenotype for rate of CD4+ cell depletion and progression to AIDS
    • Koot M, Keet I, Vos A, et al. Prognostic value of HIV-1 syncytium-inducing phenotype for rate of CD4+ cell depletion and progression to AIDS. Ann Intern Med 1993;118:681-8.
    • (1993) Ann Intern Med , vol.118 , pp. 681-688
    • Koot, M.1    Keet, I.2    Vos, A.3
  • 10
    • 0028027078 scopus 로고
    • The impact of the syncytium-inducing phenotype of HIV on disease progression
    • Richman D, Bozzette S. The impact of the syncytium-inducing phenotype of HIV on disease progression. J Infect Dis 1994;169:968-74.
    • (1994) J Infect Dis , vol.169 , pp. 968-974
    • Richman, D.1    Bozzette, S.2
  • 11
    • 0027488802 scopus 로고
    • A cross-sectional comparison of persons with syncytium- and non-synchtium-inducing HIV
    • Bozzette S, McCutchan J, Spector S, et al. A cross-sectional comparison of persons with syncytium- and non-synchtium-inducing HIV. J Infect Dis 1993;168:1374-9.
    • (1993) J Infect Dis , vol.168 , pp. 1374-1379
    • Bozzette, S.1    McCutchan, J.2    Spector, S.3
  • 12
    • 0030002637 scopus 로고    scopus 로고
    • HIV-1 entry cofactor: Functional cDNA cloning of a seven-transmembrane, G protein-coupled receptor
    • Feng Y, Broder C, Kennedy P, Berger E. HIV-1 entry cofactor: Functional cDNA cloning of a seven-transmembrane, G protein-coupled receptor. Science 1996;272:872-7.
    • (1996) Science , vol.272 , pp. 872-877
    • Feng, Y.1    Broder, C.2    Kennedy, P.3    Berger, E.4
  • 13
    • 15844419153 scopus 로고    scopus 로고
    • Identification of a major co-receptor for primary isolates of HIV-1
    • Deng H, Liu R, Ellmeier W, et al. Identification of a major co-receptor for primary isolates of HIV-1. Nature 1996;381:661-6.
    • (1996) Nature , vol.381 , pp. 661-666
    • Deng, H.1    Liu, R.2    Ellmeier, W.3
  • 14
    • 0030018156 scopus 로고    scopus 로고
    • CC CKR5: A RANTES, MIP-1α, MIP-1β Receptor as a fusion cofactor for macrophage-tropic HIV-1
    • Alkhatib G, Combadiere C, Broder C, et al. CC CKR5: A RANTES, MIP-1α, MIP-1β Receptor as a fusion cofactor for macrophage-tropic HIV-1. Science 1996;272:1955-8.
    • (1996) Science , vol.272 , pp. 1955-1958
    • Alkhatib, G.1    Combadiere, C.2    Broder, C.3
  • 15
    • 15844389650 scopus 로고    scopus 로고
    • HIV-1 entry into CD4+ cells is mediated by the chemokine receptor CC- CKR-5
    • Dragic T, Litwin V, Allaway G, et al. HIV-1 entry into CD4+ cells is mediated by the chemokine receptor CC- CKR-5. Nature 1996;381:667-73.
    • (1996) Nature , vol.381 , pp. 667-673
    • Dragic, T.1    Litwin, V.2    Allaway, G.3
  • 16
    • 1842415431 scopus 로고    scopus 로고
    • Coreceptor usage of primary HIV type 1 isolates varies according to biological phenotype
    • Björndal A, Deng H, Jansson M, et al. Co-receptor usage of primary HIV type 1 isolates varies according to biological phenotype. J Virol 1997;71:7478-87.
    • (1997) J Virol , vol.71 , pp. 7478-7487
    • Björndal, A.1    Deng, H.2    Jansson, M.3
  • 17
    • 0031575431 scopus 로고    scopus 로고
    • Change in coreceptor use correlates with disease progression in HIV-1-infected individuals
    • Connor R, Sheridan K, Ceradini D, et al. Change in coreceptor use correlates with disease progression in HIV-1-infected individuals. J Exp Med 1997,185:621-8.
    • (1997) J Exp Med , vol.185 , pp. 621-628
    • Connor, R.1    Sheridan, K.2    Ceradini, D.3
  • 18
    • 0030670330 scopus 로고    scopus 로고
    • In vivo evolution of HIV-1 coreceptor usage and sensitivity to chemokine-mediated suppression
    • Scarlatti G, Tresoldi E, Björndal A, et al. In vivo evolution of HIV-1 coreceptor usage and sensitivity to chemokine-mediated suppression. Nat Med 1997;3:1259-65.
    • (1997) Nat Med , vol.3 , pp. 1259-1265
    • Scarlatti, G.1    Tresoldi, E.2    Björndal, A.3
  • 19
    • 0031684753 scopus 로고    scopus 로고
    • Chemokine coreceptor usage by diverse primary isolates of HIV type 1
    • Zhang L, He T, Huang Y, et al. Chemokine coreceptor usage by diverse primary isolates of HIV type 1. J Virol 1998;72:9307-12.
    • (1998) J Virol , vol.72 , pp. 9307-9312
    • Zhang, L.1    He, T.2    Huang, Y.3
  • 20
    • 0005014748 scopus 로고    scopus 로고
    • The beta-chemokine receptors CCR3 and CCR5 facilitate infection by primary HIV-1 isolates
    • Choe H, Farzan M, Sun Y, et al. The beta-chemokine receptors CCR3 and CCR5 facilitate infection by primary HIV-1 isolates. Cell 1996;85:1135-48.
    • (1996) Cell , vol.85 , pp. 1135-1148
    • Choe, H.1    Farzan, M.2    Sun, Y.3
  • 21
    • 0030604727 scopus 로고    scopus 로고
    • A dual-tropic primary HIV-1 isolate that uses fusin and the beta-chemokine receptors CKR-5, CKR-3, and CKR-2b as fusion cofactors
    • Doranz B, Rucker J, Yi Y, et al. A dual-tropic primary HIV-1 isolate that uses fusin and the beta-chemokine receptors CKR-5, CKR-3, and CKR-2b as fusion cofactors. Cell 1996;85:1149-58.
    • (1996) Cell , vol.85 , pp. 1149-1158
    • Doranz, B.1    Rucker, J.2    Yi, Y.3
  • 22
    • 16044364731 scopus 로고    scopus 로고
    • HIV-1 subtype and second-receptor use
    • Zhang L, Huang Y, He T, et al. HIV-1 subtype and second-receptor use. Nature 1996;383:768.
    • (1996) Nature , vol.383 , pp. 768
    • Zhang, L.1    Huang, Y.2    He, T.3
  • 23
    • 10344266976 scopus 로고    scopus 로고
    • Primary, syncytium-inducing HIV-1 isolates are dual-tropic and most can use either Lestr or CCR5 as coreceptors for virus entry
    • Simmons G, Wilkinson D, Reeves J, et al. Primary, syncytium-inducing HIV-1 isolates are dual-tropic and most can use either Lestr or CCR5 as coreceptors for virus entry. J Virol 1996;70:8355-60.
    • (1996) J Virol , vol.70 , pp. 8355-8360
    • Simmons, G.1    Wilkinson, D.2    Reeves, J.3
  • 24
    • 0042376485 scopus 로고    scopus 로고
    • A new classification for HIV-1
    • Berger E, Doms R, Fenyö E, et al. A new classification for HIV-1. Nature 1998;391:240.
    • (1998) Nature , vol.391 , pp. 240
    • Berger, E.1    Doms, R.2    Fenyö, E.3
  • 25
    • 16044370087 scopus 로고    scopus 로고
    • The CXC chemokine SDF-1 is the ligand for LESTR/fusin and prevents infection by T-cell-line-adapted HIV-1
    • Oberlin E, Amara A, Bachelerie F, et al. The CXC chemokine SDF-1 is the ligand for LESTR/fusin and prevents infection by T-cell-line-adapted HIV-1. Nature 1996;382:833-5.
    • (1996) Nature , vol.382 , pp. 833-835
    • Oberlin, E.1    Amara, A.2    Bachelerie, F.3
  • 26
    • 0031042433 scopus 로고    scopus 로고
    • The HIV coreceptors CXCR4 and CCR5 are differentially expressed and regulated on human T lymphocytes
    • Bleul C, Wu L, Hoxie J, et al. The HIV coreceptors CXCR4 and CCR5 are differentially expressed and regulated on human T lymphocytes. Proc Natl Acad Sci USA 1997;94:1925-30.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 1925-1930
    • Bleul, C.1    Wu, L.2    Hoxie, J.3
  • 27
    • 0032194179 scopus 로고    scopus 로고
    • CXCR4 and CCR5 expression delineates targets for HIV-1 disruption of T cell differentiation
    • Berkowitz R, Beckerman K, Schall T, McCune J. CXCR4 and CCR5 expression delineates targets for HIV-1 disruption of T cell differentiation. J Immunol 1998;161:3702-10.
    • (1998) J Immunol , vol.161 , pp. 3702-3710
    • Berkowitz, R.1    Beckerman, K.2    Schall, T.3    McCune, J.4
  • 28
    • 14344275786 scopus 로고    scopus 로고
    • The human hematopoietic stem cell compartment is heterogenous for CXCR4 expression
    • Rosu-Myles M, Gallacher L, Murdoch B, et al. The human hematopoietic stem cell compartment is heterogenous for CXCR4 expression. Proc Natl Acad Sci USA 2000; 97: 14626-31.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 14626-14631
    • Rosu-Myles, M.1    Gallacher, L.2    Murdoch, B.3
  • 29
    • 0034887624 scopus 로고    scopus 로고
    • Expression and function of chemokine receptors on human thymocytes: Implications for infection by HIV type 1
    • Taylor J, Kimbrell K, Scoggins R, et al. Expression and function of chemokine receptors on human thymocytes: Implications for infection by HIV type 1. J Virol 2001;75:8752-60.
    • (2001) J Virol , vol.75 , pp. 8752-8760
    • Taylor, J.1    Kimbrell, K.2    Scoggins, R.3
  • 30
    • 0030987288 scopus 로고    scopus 로고
    • CCR5 levels and expression pattern correlate with infectivity by macrophage-tropic HIV-1, in vitro
    • Wu L, Paxton W, Kassam N, et al. CCR5 levels and expression pattern correlate with infectivity by macrophage-tropic HIV-1, in vitro. J Exp Med 1997;185:1681-91.
    • (1997) J Exp Med , vol.185 , pp. 1681-1691
    • Wu, L.1    Paxton, W.2    Kassam, N.3
  • 31
    • 0033961745 scopus 로고    scopus 로고
    • In vivo HIV-1 infection of CD45RA(+)CD4(+) T cells is established primarily by syncytium-inducing variants and correlates with the rate of CD4(+) T cell decline
    • Blaak H, Van't Wout A, Brouwer M, et al. In vivo HIV-1 infection of CD45RA(+)CD4(+) T cells is established primarily by syncytium-inducing variants and correlates with the rate of CD4(+) T cell decline. Proc Natl Acad Sci USA 2000;97:1269-74.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 1269-1274
    • Blaak, H.1    Van't Wout, A.2    Brouwer, M.3
  • 32
    • 0032775436 scopus 로고    scopus 로고
    • Both memory and CD45RA+/CD62L+ naive CD4(+) T cells are infected in HIV type 1-infected individuals
    • Ostrowski M, Chun T, Justement S, et al. Both memory and CD45RA+/CD62L+ naive CD4(+) T cells are infected in HIV type 1-infected individuals. J Virol 1999;73:6430-5.
    • (1999) J Virol , vol.73 , pp. 6430-6435
    • Ostrowski, M.1    Chun, T.2    Justement, S.3
  • 33
    • 0033587321 scopus 로고    scopus 로고
    • A mechanism of resistance to HIV-1 entry: Inefficient interactions of CXCR4 with CD4 and gp120 in macrophages
    • Dimitrov D, Norwood D, Stantchev T, et al. A mechanism of resistance to HIV-1 entry: Inefficient interactions of CXCR4 with CD4 and gp120 in macrophages. Virology 1999;259:1-6.
    • (1999) Virology , vol.259 , pp. 1-6
    • Dimitrov, D.1    Norwood, D.2    Stantchev, T.3
  • 34
    • 0033016935 scopus 로고    scopus 로고
    • Fusion of monocytes and macrophages with HIV-1 correlates with biochemical properties of CXCR4 and CCR5
    • Lapham C, Zaitseva M, Lee S, et al. Fusion of monocytes and macrophages with HIV-1 correlates with biochemical properties of CXCR4 and CCR5. Nat Med 1999;5:303-8.
    • (1999) Nat Med , vol.5 , pp. 303-308
    • Lapham, C.1    Zaitseva, M.2    Lee, S.3
  • 35
    • 0031014643 scopus 로고    scopus 로고
    • Infectious properties of HIV type 1 mutants with distinct affinities for the CD4 receptor
    • Platt E, Madani N, Kozak S, Kabat D. Infectious properties of HIV type 1 mutants with distinct affinities for the CD4 receptor. J Virol 1997;71:883-90.
    • (1997) J Virol , vol.71 , pp. 883-890
    • Platt, E.1    Madani, N.2    Kozak, S.3    Kabat, D.4
  • 36
    • 0031031452 scopus 로고    scopus 로고
    • CD4, CXCR-4, and CCR-5 dependencies for infections by primary patient and laboratory-adapted isolates of HIV type 1
    • Kozak S, Platt E, Madani N, et al. CD4, CXCR-4, and CCR-5 dependencies for infections by primary patient and laboratory-adapted isolates of HIV type 1. J Virol 1997;71:873-82.
    • (1997) J Virol , vol.71 , pp. 873-882
    • Kozak, S.1    Platt, E.2    Madani, N.3
  • 37
    • 0034960174 scopus 로고    scopus 로고
    • Molecular basis for cell tropism of CXCR4-dependent HIV type 1 isolates
    • Tokunaga K, Greenberg M, Morse M, et al. Molecular basis for cell tropism of CXCR4-dependent HIV type 1 isolates. J Virol 2001;75:6776-85.
    • (2001) J Virol , vol.75 , pp. 6776-6785
    • Tokunaga, K.1    Greenberg, M.2    Morse, M.3
  • 38
    • 0028293288 scopus 로고
    • Differences in CD4 dependence for infectivity of laboratory-adapted and primary patient isolates of HIV type 1
    • Kabat D, Kozak S, Wehrly K, Chesebro B. Differences in CD4 dependence for infectivity of laboratory-adapted and primary patient isolates of HIV type 1. J Virol 1994;68:2570-7.
    • (1994) J Virol , vol.68 , pp. 2570-2577
    • Kabat, D.1    Kozak, S.2    Wehrly, K.3    Chesebro, B.4
  • 39
    • 0026640859 scopus 로고
    • Phenotype-associated env gene variation among eight related HIV type 1 clones: Evidence for in vivo recombination and determinants of cytotropism outside the V3 domain
    • Groenink M, Andeweg A, Fouchier R, et al. Phenotype-associated env gene variation among eight related HIV type 1 clones: Evidence for in vivo recombination and determinants of cytotropism outside the V3 domain. J Virol 1992;66:6175-80.
    • (1992) J Virol , vol.66 , pp. 6175-6180
    • Groenink, M.1    Andeweg, A.2    Fouchier, R.3
  • 40
    • 0025065099 scopus 로고
    • HIV-1 tropism for mononuclear phagocytes can be determined by regions of gp120 outside the CD4-binding domain
    • O'Brien W, Koyanagi Y, Namazie A, et al. HIV-1 tropism for mononuclear phagocytes can be determined by regions of gp120 outside the CD4-binding domain. Nature 1990;348:69-73.
    • (1990) Nature , vol.348 , pp. 69-73
    • O'Brien, W.1    Koyanagi, Y.2    Namazie, A.3
  • 41
    • 0026089184 scopus 로고
    • Macrophage and T cell-line tropisms of HIV-1 are determined by specific regions of the envelope gp120 gene
    • Shioda T, Levy J, Cheng-Mayer C. Macrophage and T cell-line tropisms of HIV-1 are determined by specific regions of the envelope gp120 gene. Nature 1991;349:167-9.
    • (1991) Nature , vol.349 , pp. 167-169
    • Shioda, T.1    Levy, J.2    Cheng-Mayer, C.3
  • 42
    • 0025930562 scopus 로고
    • Identification of HIV envelope gene sequences influencing viral entry into CD4-positive Hela cells. T-leukemic cells and macrophages
    • Chesebro B, Nishio J, Perryman S, et al. Identification of HIV envelope gene sequences influencing viral entry into CD4-positive Hela cells. T-leukemic cells and macrophages. J Virol 1991;65:5782.
    • (1991) J Virol , vol.65 , pp. 5782
    • Chesebro, B.1    Nishio, J.2    Perryman, S.3
  • 43
    • 0026754683 scopus 로고
    • Small amino acid changes in the V3 hypervariable region of gp120 can affect the T-cell-line and macrophage tropism of HIV type 1
    • Shioda T, Levy J, Cheng-Mayer C. Small amino acid changes in the V3 hypervariable region of gp120 can affect the T-cell-line and macrophage tropism of HIV type 1. Proc Natl Acad Sci USA 1992;89:9434-8.
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 9434-9438
    • Shioda, T.1    Levy, J.2    Cheng-Mayer, C.3
  • 44
    • 0026606727 scopus 로고
    • Phenotype-associated sequence variation in the third variable domain (V3) of the HIV type 1 gp120 molecule
    • Fouchier R, Groenink M, Kootstra N, et al. Phenotype-associated sequence variation in the third variable domain (V3) of the HIV type 1 gp120 molecule. J Virol 1992;66:3183-7.
    • (1992) J Virol , vol.66 , pp. 3183-3187
    • Fouchier, R.1    Groenink, M.2    Kootstra, N.3
  • 45
    • 0027205624 scopus 로고
    • Relation of phenotype evolution of HIV-1 to envelope V2 configuration
    • Groenink M, Fouchier R, Broersen S, et al. Relation of phenotype evolution of HIV-1 to envelope V2 configuration. Science 1993;260:1513-6.
    • (1993) Science , vol.260 , pp. 1513-1516
    • Groenink, M.1    Fouchier, R.2    Broersen, S.3
  • 46
    • 0025783669 scopus 로고
    • Identification of the envelope V3 loop as the primary determinant of cell tropism in HIV-1
    • Hwang S, Boyle T, Kim-Lyerly H, Cullen B. Identification of the envelope V3 loop as the primary determinant of cell tropism in HIV-1. Science 1991;253:71-4.
    • (1991) Science , vol.253 , pp. 71-74
    • Hwang, S.1    Boyle, T.2    Kim-Lyerly, H.3    Cullen, B.4
  • 47
    • 0026501677 scopus 로고
    • HIV type 1 clones chimeric for the envelope V3 domain differ in syncytium formation and replication capacity
    • De Jong JJ, Goudsmit J, Keulen W, et al. HIV type 1 clones chimeric for the envelope V3 domain differ in syncytium formation and replication capacity. J Virol 1992;66:757-65.
    • (1992) J Virol , vol.66 , pp. 757-765
    • De Jong, J.J.1    Goudsmit, J.2    Keulen, W.3
  • 48
    • 0026672676 scopus 로고
    • Macrophage-tropic HIV isolates from different patients exhibit unusual V3 envelope sequence homogeneity in comparison with T-cell-tropic isolates: Definition of critical amino acids involved in cell tropism
    • Chesebro B, Wehrly K, Nishio J, Perryman S. Macrophage-tropic HIV isolates from different patients exhibit unusual V3 envelope sequence homogeneity in comparison with T-cell-tropic isolates: Definition of critical amino acids involved in cell tropism. J Virol 1992;66:6547-54.
    • (1992) J Virol , vol.66 , pp. 6547-6554
    • Chesebro, B.1    Wehrly, K.2    Nishio, J.3    Perryman, S.4
  • 49
    • 0032530453 scopus 로고    scopus 로고
    • HIV type 1 envelope determinants for use of the CCR2b, CCR3, STRL33, and APJ coreceptors
    • Hoffman T, Stephens E, Narayan O, Doms R. HIV type 1 envelope determinants for use of the CCR2b, CCR3, STRL33, and APJ coreceptors. Proc Natl Acad Sci USA 1998;95:11360-5.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 11360-11365
    • Hoffman, T.1    Stephens, E.2    Narayan, O.3    Doms, R.4
  • 50
    • 0033541941 scopus 로고    scopus 로고
    • Identification of determinants of interaction between CXCR4 and gp120 of a dual-tropic HIV-1DH12 isolate
    • Lee M, Heaton J, Cho M. Identification of determinants of interaction between CXCR4 and gp120 of a dual-tropic HIV-1DH12 isolate. Virology 1999;257:290-6.
    • (1999) Virology , vol.257 , pp. 290-296
    • Lee, M.1    Heaton, J.2    Cho, M.3
  • 51
    • 0031978550 scopus 로고    scopus 로고
    • Determinants of entry cofactor utilization and tropism in a dual tropic HIV type 1 primary isolate
    • Smyth R, Yi Y, Singh A, Collman R. Determinants of entry cofactor utilization and tropism in a dual tropic HIV type 1 primary isolate. J Virol 1998;72:4478-84.
    • (1998) J Virol , vol.72 , pp. 4478-4484
    • Smyth, R.1    Yi, Y.2    Singh, A.3    Collman, R.4
  • 52
    • 0032933836 scopus 로고    scopus 로고
    • Apoptosis induced by infection of primary brain cultures with diverse HIV type 1 isolates: Evidence for a role of the envelope
    • Ohagen A, Ghosh S, He J, et al. Apoptosis induced by infection of primary brain cultures with diverse HIV type 1 isolates: Evidence for a role of the envelope. J Virol 1999;73:897-906.
    • (1999) J Virol , vol.73 , pp. 897-906
    • Ohagen, A.1    Ghosh, S.2    He, J.3
  • 53
    • 0026702003 scopus 로고
    • Minimal requirements for the human immunodeficiency virus type 1 V3 domain to support the syncytium-inducing phenotype: Analysis by single amino acid substitution
    • De Jong JJ, De Ronde A, Keulen W, et al. Minimal requirements for the human immunodeficiency virus type 1 V3 domain to support the syncytium-inducing phenotype: Analysis by single amino acid substitution. J Virol 1992;66:6777-80.
    • (1992) J Virol , vol.66 , pp. 6777-6780
    • De Jong, J.J.1    De Ronde, A.2    Keulen, W.3
  • 54
    • 0032169683 scopus 로고    scopus 로고
    • Effect of major deletions in the V1 and V2 loops of a macrophage-tropic HIV type 1 isolate on viral envelope structure, cell entry, and replication
    • Stamatatos L, Wiskerchen M, Cheng-Mayer C. Effect of major deletions in the V1 and V2 loops of a macrophage-tropic HIV type 1 isolate on viral envelope structure, cell entry, and replication. AIDS Res Hum Retroviruses 1998;14:1129-39.
    • (1998) AIDS Res Hum Retroviruses , vol.14 , pp. 1129-1139
    • Stamatatos, L.1    Wiskerchen, M.2    Cheng-Mayer, C.3
  • 55
    • 0030025979 scopus 로고    scopus 로고
    • Cooperative effects of the HIV type 1 envelope variable loops V1 and V3 in mediating infectivity for T cells
    • Carrillo A, Ratner L. Cooperative effects of the HIV type 1 envelope variable loops V1 and V3 in mediating infectivity for T cells. J Virol 1996;70:1310-6.
    • (1996) J Virol , vol.70 , pp. 1310-1316
    • Carrillo, A.1    Ratner, L.2
  • 56
    • 0028941072 scopus 로고
    • Envelope V2 configuration and HIV-1 phenotype: Clarification
    • Schuitemaker H, Fouchier R, Broersen S, et al. Envelope V2 configuration and HIV-1 phenotype: Clarification. Science 1995;268:115.
    • (1995) Science , vol.268 , pp. 115
    • Schuitemaker, H.1    Fouchier, R.2    Broersen, S.3
  • 57
    • 0033059948 scopus 로고    scopus 로고
    • Shift of clinical HIV type 1 isolates from X4 to R5 and prevention of emergence of the syncytium-inducing phenotype by blockade of CXCR4
    • Este J, Cabrera C, Blanco J, et al. Shift of clinical HIV type 1 isolates from X4 to R5 and prevention of emergence of the syncytium-inducing phenotype by blockade of CXCR4. J Virol 1999;73:5577-85.
    • (1999) J Virol , vol.73 , pp. 5577-5585
    • Este, J.1    Cabrera, C.2    Blanco, J.3
  • 58
    • 0025008168 scopus 로고
    • Sequence logos: A new way to display consensus sequences
    • Schneider T, Stephens R. Sequence logos: A new way to display consensus sequences. Nucleic Acids Res 1990;18:6097-100.
    • (1990) Nucleic Acids Res , vol.18 , pp. 6097-6100
    • Schneider, T.1    Stephens, R.2
  • 59
    • 0031029083 scopus 로고    scopus 로고
    • Evolutionary mechanisms and population dynamics of the third variable envelope region of HIV within single hosts
    • Yamaguchi Y, Gojobori T. Evolutionary mechanisms and population dynamics of the third variable envelope region of HIV within single hosts. Proc Natl Acad Sci USA 1997;94:1264-9.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 1264-1269
    • Yamaguchi, Y.1    Gojobori, T.2
  • 60
    • 0027980445 scopus 로고
    • Mutational trends in V3 loop protein sequences observed in different genetic lineages of HIV type 1
    • Korber B, MacInnes K, Smith R, Myers G. Mutational trends in V3 loop protein sequences observed in different genetic lineages of HIV type 1. J Virol 1994;68:6730-44.
    • (1994) J Virol , vol.68 , pp. 6730-6744
    • Korber, B.1    MacInnes, K.2    Smith, R.3    Myers, G.4
  • 62
    • 0027221071 scopus 로고
    • V3 loop of the HIV type 1 Env protein: Interpreting sequence variability
    • Milich L, Margolin B, Swanstrom R. V3 loop of the HIV type 1 Env protein: Interpreting sequence variability. J Virol 1993;67:5623-34.
    • (1993) J Virol , vol.67 , pp. 5623-5634
    • Milich, L.1    Margolin, B.2    Swanstrom, R.3
  • 63
    • 0031455910 scopus 로고    scopus 로고
    • Patterns of amino acid variability in NSI-like and SI-like V3 sequences and a linked change in the CD4-binding domain of the HIV-1 Env protein
    • Milich L, Margolin B, Swanstrom R. Patterns of amino acid variability in NSI-like and SI-like V3 sequences and a linked change in the CD4-binding domain of the HIV-1 Env protein. Virology 1997;239:108-18.
    • (1997) Virology , vol.239 , pp. 108-118
    • Milich, L.1    Margolin, B.2    Swanstrom, R.3
  • 64
    • 0036196484 scopus 로고    scopus 로고
    • Variability in the HIV type 1 gp120 Env protein linked to phenotype-associated changes in the V3 loop
    • Hoffman N, Seillier-Moiseiwitsch F, Ahn J, et al. Variability in the HIV type 1 gp120 Env protein linked to phenotype-associated changes in the V3 loop. J Virol 2002;76:3852-64.
    • (2002) J Virol , vol.76 , pp. 3852-3864
    • Hoffman, N.1    Seillier-Moiseiwitsch, F.2    Ahn, J.3
  • 65
    • 0034523325 scopus 로고    scopus 로고
    • Envelope V3 amino acid sequence predicts HIV-1 phenotype (co-receptor usage and tropism for macrophages)
    • Briggs D, Tuttle D, Sleasman J, Goodenow M. Envelope V3 amino acid sequence predicts HIV-1 phenotype (co-receptor usage and tropism for macrophages). AIDS 2000;14:2937-9.
    • (2000) AIDS , vol.14 , pp. 2937-2939
    • Briggs, D.1    Tuttle, D.2    Sleasman, J.3    Goodenow, M.4
  • 66
    • 0035884899 scopus 로고    scopus 로고
    • Improved success of phenotype prediction of the HIV type 1 from envelope variable loop 3 sequence using neural networks
    • Resch W, Hoffman N, Swanstrom R. Improved success of phenotype prediction of the HIV type 1 from envelope variable loop 3 sequence using neural networks. Virology 2001;288:51-62.
    • (2001) Virology , vol.288 , pp. 51-62
    • Resch, W.1    Hoffman, N.2    Swanstrom, R.3
  • 69
    • 0025371704 scopus 로고
    • Finding protein similarities with nucleotide sequence databases
    • Henikoff S, Wallace J, Brown J. Finding protein similarities with nucleotide sequence databases. Methods Enzymol 1990;183:111-32.
    • (1990) Methods Enzymol , vol.183 , pp. 111-132
    • Henikoff, S.1    Wallace, J.2    Brown, J.3
  • 70
    • 0033786824 scopus 로고    scopus 로고
    • Differential coreceptor expression allows for independent evolution of non-syncytium-inducing and syncytium-inducing HIV-1
    • Van Rij R, Blaak H, Visser J, et al. Differential coreceptor expression allows for independent evolution of non-syncytium-inducing and syncytium-inducing HIV-1. J Clin Invest 2000;106:1039-52.
    • (2000) J Clin Invest , vol.106 , pp. 1039-1052
    • Van Rij, R.1    Blaak, H.2    Visser, J.3
  • 71
    • 0032837825 scopus 로고    scopus 로고
    • Role of CXCR4 in cell-cell fusion and infection of monocyte-derived macrophages by primary HIV-1 strains: Two distinct mechanisms of HIV-1 dual tropism
    • Yi Y, Isaacs S, Williams D, et al. Role of CXCR4 in cell-cell fusion and infection of monocyte-derived macrophages by primary HIV-1 strains: Two distinct mechanisms of HIV-1 dual tropism. J Virol 1999;73:7117-25.
    • (1999) J Virol , vol.73 , pp. 7117-7125
    • Yi, Y.1    Isaacs, S.2    Williams, D.3
  • 72
    • 12644274812 scopus 로고    scopus 로고
    • Relative resistance to HIV-1 infection of CD4 lymphocytes from persons who remain uninfected despite multiple high-risk sexual exposure
    • Paxton WA, Martin SR, Tse D, et al. Relative resistance to HIV-1 infection of CD4 lymphocytes from persons who remain uninfected despite multiple high-risk sexual exposure. Nature Medicine 1996;2:412-7.
    • (1996) Nature Medicine , vol.2 , pp. 412-417
    • Paxton, W.A.1    Martin, S.R.2    Tse, D.3
  • 73
    • 15844388931 scopus 로고    scopus 로고
    • Homozygous defect in HIV-1 coreceptor accounts for resistance of some multiply-exposed individuals to HIV-1 infection
    • Liu R, Paxton W, Choe S, et al. Homozygous defect in HIV-1 coreceptor accounts for resistance of some multiply-exposed individuals to HIV-1 infection. Cell 1996;86:367-77.
    • (1996) Cell , vol.86 , pp. 367-377
    • Liu, R.1    Paxton, W.2    Choe, S.3
  • 74
    • 0001633495 scopus 로고    scopus 로고
    • Genetic restriction of HIV-1 infection and progression to AIDS by a deletion allele of the CKR5 structural gene
    • Dean M, Carrington M, Winkler C, et al. Genetic restriction of HIV-1 infection and progression to AIDS by a deletion allele of the CKR5 structural gene. Science 1996;273:1856-62.
    • (1996) Science , vol.273 , pp. 1856-1862
    • Dean, M.1    Carrington, M.2    Winkler, C.3
  • 75
    • 0036500559 scopus 로고    scopus 로고
    • HIV-1 infection in individuals with the CCR5-Delta/Delta32 genotype: Acquisition of syncytium-inducing virus at seroconversion
    • Sheppard H, Celum C, Michael N, et al. HIV-1 infection in individuals with the CCR5-Delta/Delta32 genotype: Acquisition of syncytium-inducing virus at seroconversion. J Acquir Immune Defic Syndr 2002;29:307-13.
    • (2002) J Acquir Immune Defic Syndr , vol.29 , pp. 307-313
    • Sheppard, H.1    Celum, C.2    Michael, N.3
  • 76
    • 0037439281 scopus 로고    scopus 로고
    • Limited protective effect of the CCR5Delta32/CCR5Delta32 genotype on HIV infection incidence in a cohort of patients with hemophilia and selection for genotypic X4 virus
    • Iversen A, Christiansen C, Attermann J, et al. Limited protective effect of the CCR5Delta32/CCR5Delta32 genotype on HIV infection incidence in a cohort of patients with hemophilia and selection for genotypic X4 virus. J Infect Dis 2003;187:215-25.
    • (2003) J Infect Dis , vol.187 , pp. 215-225
    • Iversen, A.1    Christiansen, C.2    Attermann, J.3
  • 77
    • 17544384752 scopus 로고    scopus 로고
    • Exclusive and persistent use of the entry coreceptor CXCR4 by HIV type 1 from a subject homozygous for CCR5 delta32
    • Michael N, Nelson J, Kewal Ramani V, et al. Exclusive and persistent use of the entry coreceptor CXCR4 by HIV type 1 from a subject homozygous for CCR5 delta32. J Virol 1998;72:6040-7.
    • (1998) J Virol , vol.72 , pp. 6040-6047
    • Michael, N.1    Nelson, J.2    Kewal Ramani, V.3
  • 78
    • 0037172396 scopus 로고    scopus 로고
    • Persistence of dual-tropic HIV-1 in an individual homozygous for the CCR5 Delta 32 allele
    • Gorry P, Zhang C, Wu S, et al. Persistence of dual-tropic HIV-1 in an individual homozygous for the CCR5 Delta 32 allele. Lancet 2002;359:1832-4.
    • (2002) Lancet , vol.359 , pp. 1832-1834
    • Gorry, P.1    Zhang, C.2    Wu, S.3
  • 79
    • 0031950204 scopus 로고    scopus 로고
    • Evolution of syncytium-inducing and non-syncytium-inducing biological virus clones in relation to replication kinetics during the course of HIV type 1 infection
    • Van't Wout A, Blaak H, Ran L, et al. Evolution of syncytium-inducing and non-syncytium-inducing biological virus clones in relation to replication kinetics during the course of HIV type 1 infection. J Virol 1998;72:5099-107.
    • (1998) J Virol , vol.72 , pp. 5099-5107
    • Van't Wout, A.1    Blaak, H.2    Ran, L.3
  • 80
    • 0032924183 scopus 로고    scopus 로고
    • Highly potent RANTES analogues either prevent CCR5-using HIV type 1 infection in vivo or rapidly select for CXCR4-using variants
    • Mosier D, Picchio G, Gulizia R, et al. Highly potent RANTES analogues either prevent CCR5-using HIV type 1 infection in vivo or rapidly select for CXCR4-using variants. J Virol 1999;73:3544-50.
    • (1999) J Virol , vol.73 , pp. 3544-3550
    • Mosier, D.1    Picchio, G.2    Gulizia, R.3
  • 81
    • 0037039380 scopus 로고    scopus 로고
    • HIV-1 escape from a small molecule, CCR5-specific entry inhibitor does not involve CXCR4 use
    • Trkola A, Kuhmann S, Strizki J, et al. HIV-1 escape from a small molecule, CCR5-specific entry inhibitor does not involve CXCR4 use. Proc Natl Acad Sci USA 2002;99:395-400.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 395-400
    • Trkola, A.1    Kuhmann, S.2    Strizki, J.3
  • 82
    • 0031968673 scopus 로고    scopus 로고
    • T-cell-line-tropic HIV type 1 that is made resistant to stromal cell-derived factor 1alpha contains mutations in the envelope gp120 but does not show a switch in coreceptor use
    • Schols D, Este J, Cabrera C, De Clercq E. T-cell-line-tropic HIV type 1 that is made resistant to stromal cell-derived factor 1alpha contains mutations in the envelope gp120 but does not show a switch in coreceptor use. J Virol 1998;72:4032-7.
    • (1998) J Virol , vol.72 , pp. 4032-4037
    • Schols, D.1    Este, J.2    Cabrera, C.3    De Clercq, E.4
  • 83
    • 1842301158 scopus 로고    scopus 로고
    • Selective inhibition of syncytium-inducing and nonsyncytium-inducing HIV-1 variants in individuals receiving didanosine or zidovudine, respectively
    • Van't Wout A, Ran L, De Jong M, et al. Selective inhibition of syncytium-inducing and nonsyncytium-inducing HIV-1 variants in individuals receiving didanosine or zidovudine, respectively. J Clin Invest 1997;100:2325-32.
    • (1997) J Clin Invest , vol.100 , pp. 2325-2332
    • Van't Wout, A.1    Ran, L.2    De Jong, M.3
  • 84
    • 0035114185 scopus 로고    scopus 로고
    • Preferential suppression of CXCR4-specific strains of HIV-1 by antiviral therapy
    • Philpott S, Weiser B, Anastos K, et al. Preferential suppression of CXCR4-specific strains of HIV-1 by antiviral therapy. J Clin Invest 2001;107:431-8.
    • (2001) J Clin Invest , vol.107 , pp. 431-438
    • Philpott, S.1    Weiser, B.2    Anastos, K.3
  • 85
    • 0033856458 scopus 로고    scopus 로고
    • Sensitivity of HIV type 1 to the fusion inhibitor T-20 is modulated by coreceptor specificity defined by the V3 loop of gp120
    • Derdeyn C, Decker J, Sfakianos J, et al. Sensitivity of HIV type 1 to the fusion inhibitor T-20 is modulated by coreceptor specificity defined by the V3 loop of gp120. J Virol 2000;74:8358-67.
    • (2000) J Virol , vol.74 , pp. 8358-8367
    • Derdeyn, C.1    Decker, J.2    Sfakianos, J.3


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