-
1
-
-
0030018156
-
CC CKR5: A RANTES, MIP-1α, MIP-1β receptor as a fusion cofactor for macrophage-tropic HIV-1
-
Alkhatib, G., C. Combadiere, C. C. Broder, Y. Feng, P. E. Kennedy, P. M. Murphy, and E. A. Berger. 1996. CC CKR5: a RANTES, MIP-1α, MIP-1β receptor as a fusion cofactor for macrophage-tropic HIV-1. Science 272: 1955-1958.
-
(1996)
Science
, vol.272
, pp. 1955-1958
-
-
Alkhatib, G.1
Combadiere, C.2
Broder, C.C.3
Feng, Y.4
Kennedy, P.E.5
Murphy, P.M.6
Berger, E.A.7
-
2
-
-
0022485649
-
Replicative capacity of human immunodeficiency virus from patients with varying severity of HIV infection
-
Åsjö, B., J. Albert, A. Karlsson, L. Morfeldt-Månson, G. Biberfeld, K. Lidman, and E. M. Fenyö. 1986. Replicative capacity of human immunodeficiency virus from patients with varying severity of HIV infection. Lancet ii: 660-662.
-
(1986)
Lancet
, vol.2
, pp. 660-662
-
-
Åsjö, B.1
Albert, J.2
Karlsson, A.3
Morfeldt-Månson, L.4
Biberfeld, G.5
Lidman, K.6
Fenyö, E.M.7
-
3
-
-
0028297360
-
Distinct effects in primary macrophages and lymphocytes of the human immunodeficiency virus type 1 accessory genes vpr, vpu, and nef: Mutational analysis of a primary HIV-1 isolate
-
Balliet, J. W., D. L. Kolson, G. Eiger, F. M. Kim, K. A. MacGann, A. Srinivasan, and R. Collman. 1994. Distinct effects in primary macrophages and lymphocytes of the human immunodeficiency virus type 1 accessory genes vpr, vpu, and nef: mutational analysis of a primary HIV-1 isolate. Virology 200:623-631.
-
(1994)
Virology
, vol.200
, pp. 623-631
-
-
Balliet, J.W.1
Kolson, D.L.2
Eiger, G.3
Kim, F.M.4
MacGann, K.A.5
Srinivasan, A.6
Collman, R.7
-
4
-
-
2642666959
-
-
Blaak, H. Unpublished observations
-
Blaak, H. Unpublished observations.
-
-
-
-
5
-
-
0025089978
-
A rapid and simple method for purification of nucleic acids
-
Boom, R., C. J. A. Sol, M. M. M. Salimans, C. L. Jansen, P. M. E. Wertheim-van Dillen, and J. Van der Noordaa. 1991. A rapid and simple method for purification of nucleic acids. J. Clin. Microbiol. 28:495-503.
-
(1991)
J. Clin. Microbiol.
, vol.28
, pp. 495-503
-
-
Boom, R.1
Sol, C.J.A.2
Salimans, M.M.M.3
Jansen, C.L.4
Wertheim-van Dillen, P.M.E.5
Van Der Noordaa, J.6
-
6
-
-
0023989956
-
Biologic features of HIV-1 that correlate with virulence in the host
-
Cheng-Mayer, C., D. Seto, M. Tateno, and J. A. Levy. 1988. Biologic features of HIV-1 that correlate with virulence in the host. Science 240:80-82.
-
(1988)
Science
, vol.240
, pp. 80-82
-
-
Cheng-Mayer, C.1
Seto, D.2
Tateno, M.3
Levy, J.A.4
-
7
-
-
0005014748
-
The β-chemokine receptors CCR3 and CCR5 facilitate infection by primary HIV-1 isolates
-
Choe, H., M. Farzan, Y. Sun, N. Sullivan, B. Rollins, P. D. Ponath, L. Wu, C. R. Mackay, G. LaRosa, W. Newman, N. Gerard, C. Gerard, and J. Sodroski. 1996. The β-chemokine receptors CCR3 and CCR5 facilitate infection by primary HIV-1 isolates. Cell 85:1135-1148.
-
(1996)
Cell
, vol.85
, pp. 1135-1148
-
-
Choe, H.1
Farzan, M.2
Sun, Y.3
Sullivan, N.4
Rollins, B.5
Ponath, P.D.6
Wu, L.7
Mackay, C.R.8
LaRosa, G.9
Newman, W.10
Gerard, N.11
Gerard, C.12
Sodroski, J.13
-
8
-
-
0028228751
-
Human immunodeficiency virus type 1 variants with increased replicative capacity develop during the asymptomatic stage before disease progression
-
Connor, R. I., and D. D. Ho. 1994. Human immunodeficiency virus type 1 variants with increased replicative capacity develop during the asymptomatic stage before disease progression. J. Virol. 68:4400-4408.
-
(1994)
J. Virol.
, vol.68
, pp. 4400-4408
-
-
Connor, R.I.1
Ho, D.D.2
-
9
-
-
0027409934
-
+ T-lymphocyte decline and clinical progression in human immunodeficiency virus type 1-infected individuals
-
+ T-lymphocyte decline and clinical progression in human immunodeficiency virus type 1-infected individuals. J. Virol. 67:1772-1777.
-
(1993)
J. Virol.
, vol.67
, pp. 1772-1777
-
-
Connor, R.I.1
Mohri, H.2
Cao, Y.3
Ho, D.D.4
-
10
-
-
0026702003
-
Minimal requirements for the human immunodeficiency virus type 1 V3 domain to support the syncytium-inducing phenotype: Analysis by single amino acid substitution
-
De Jong, J. J., A. De Ronde, W. Keulen, M. Tersmette, and J. Goudsmit. 1992. Minimal requirements for the human immunodeficiency virus type 1 V3 domain to support the syncytium-inducing phenotype: analysis by single amino acid substitution. J. Virol. 66:6777-6780.
-
(1992)
J. Virol.
, vol.66
, pp. 6777-6780
-
-
De Jong, J.J.1
De Ronde, A.2
Keulen, W.3
Tersmette, M.4
Goudsmit, J.5
-
11
-
-
15844419153
-
Identification of the major co-receptor for primary isolates of HIV-1
-
Deng, H. K., R. Liu, W. Ellmeier, S. Choe, D. Unutmaz, M. Burkhart, P. Di Marzio, S. Marmon, R. E. Suttons, C. M. Hill, C. B. Davis, S. C. Peiper, T. J. Schall, D. R. Littman, and N. R. Landau. 1996. Identification of the major co-receptor for primary isolates of HIV-1. Nature 381:661-666.
-
(1996)
Nature
, vol.381
, pp. 661-666
-
-
Deng, H.K.1
Liu, R.2
Ellmeier, W.3
Choe, S.4
Unutmaz, D.5
Burkhart, M.6
Di Marzio, P.7
Marmon, S.8
Suttons, R.E.9
Hill, C.M.10
Davis, C.B.11
Peiper, S.C.12
Schall, T.J.13
Littman, D.R.14
Landau, N.R.15
-
12
-
-
0007643930
-
Association between CCR5 genotype and the clinical course of HIV-1 infection
-
De Roda Husman, A. M., M. Koot, M. T. E. Cornelissen, M. Brouwer, S. M. Broersen, M. Bakker, M. T. L. Roos, M. Prins, F. De Wolf, R. A. Coutinho, F. Miedema, J. Goudsmit, and H. Schuitemaker. 1997. Association between CCR5 genotype and the clinical course of HIV-1 infection. Ann. Intern. Med. 127:882-890.
-
(1997)
Ann. Intern. Med.
, vol.127
, pp. 882-890
-
-
De Roda Husman, A.M.1
Koot, M.2
Cornelissen, M.T.E.3
Brouwer, M.4
Broersen, S.M.5
Bakker, M.6
Roos, M.T.L.7
Prins, M.8
De Wolf, F.9
Coutinho, R.A.10
Miedema, F.11
Goudsmit, J.12
Schuitemaker, H.13
-
13
-
-
0030604727
-
A dual-tropic primary HIV-1 isolate that uses fusin and the β-chemokine receptors CKR-5, CKR-3 and CKR-2b as fusion cofactors
-
Doranz, B. J., J. Rucker, Y. Yi, R. J. Smyth, M. Samson, S. C. Peiper, M. Parmentier, R. G. Collman, and R. W. Doms. 1996. A dual-tropic primary HIV-1 isolate that uses fusin and the β-chemokine receptors CKR-5, CKR-3 and CKR-2b as fusion cofactors. Cell 85:1149-1158.
-
(1996)
Cell
, vol.85
, pp. 1149-1158
-
-
Doranz, B.J.1
Rucker, J.2
Yi, Y.3
Smyth, R.J.4
Samson, M.5
Peiper, S.C.6
Parmentier, M.7
Collman, R.G.8
Doms, R.W.9
-
14
-
-
15844389650
-
HIV-1 entry into CD4+ cells is mediated by the chemokine receptor CC-CKR-5
-
Dragic, T., V. Litwin, G. P. Allaway, S. R. Martin, Y. Huang, K. A. Nagashima, C. Cayanan, P. J. Maddon, R. A. Koup, J. P. Moore, and W. A. Paxton. 1996. HIV-1 entry into CD4+ cells is mediated by the chemokine receptor CC-CKR-5. Nature 381:667-673.
-
(1996)
Nature
, vol.381
, pp. 667-673
-
-
Dragic, T.1
Litwin, V.2
Allaway, G.P.3
Martin, S.R.4
Huang, Y.5
Nagashima, K.A.6
Cayanan, C.7
Maddon, P.J.8
Koup, R.A.9
Moore, J.P.10
Paxton, W.A.11
-
15
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
16
-
-
0003954036
-
-
University Herbarium, University of California at Berkeley, Berkeley, Calif.
-
Felsenstein, J. 1993. PHYLIP manual version 3.5. University Herbarium, University of California at Berkeley, Berkeley, Calif.
-
(1993)
PHYLIP Manual Version 3.5
-
-
Felsenstein, J.1
-
17
-
-
0030002637
-
HIV-1 entry cofactor: Functional cDNA cloning of a seven-transmembrane, G protein-coupled receptor
-
Feng, Y., C. C. Broder, P. E. Kennedy, and E. A. Berger. 1996. HIV-1 entry cofactor: functional cDNA cloning of a seven-transmembrane, G protein-coupled receptor. Science 272:872-877.
-
(1996)
Science
, vol.272
, pp. 872-877
-
-
Feng, Y.1
Broder, C.C.2
Kennedy, P.E.3
Berger, E.A.4
-
18
-
-
0029563103
-
Temporal relationship between elongation of the HIV-1 gp120 V2 domain and the conversion towards a syncytium inducing phenotype
-
Fouchier, R. A. M., S. M. Broersen, M. Brouwer, M. Tersmette, A. B. van 't Wout, M. Groenink, and H. Schuitemaker. 1995. Temporal relationship between elongation of the HIV-1 gp120 V2 domain and the conversion towards a syncytium inducing phenotype. AIDS Res. Hum. Retroviruses 11: 1473-1478.
-
(1995)
AIDS Res. Hum. Retroviruses
, vol.11
, pp. 1473-1478
-
-
Fouchier, R.A.M.1
Broersen, S.M.2
Brouwer, M.3
Tersmette, M.4
Van 'T Wout, A.B.5
Groenink, M.6
Schuitemaker, H.7
-
19
-
-
0026606727
-
Phenotype-associated sequence variation in the third variable domain of the human immunodeficiency virus type 1 gp120 molecule
-
Fouchier, R. A. M., M. Groenink, N. A. Kootstra, M. Tersmette, J. G. Huisman, F. Miedema, and H. Schuitemaker. 1992. Phenotype-associated sequence variation in the third variable domain of the human immunodeficiency virus type 1 gp120 molecule. J. Virol. 66:3183-3187.
-
(1992)
J. Virol.
, vol.66
, pp. 3183-3187
-
-
Fouchier, R.A.M.1
Groenink, M.2
Kootstra, N.A.3
Tersmette, M.4
Huisman, J.G.5
Miedema, F.6
Schuitemaker, H.7
-
20
-
-
0026640859
-
Phenotype-associated env gene variation among eight related human immunodeficiency virus type 1 clones: Evidence for in vivo recombination and determinants of cytotropism outside the V3 domain
-
Groenink, M., A. C. Andeweg, R. A. M. Fouchier, S. M. Broersen, R. C. M. Van der Jagt, H. Schuitemaker, R. E. Y. De Goede, M. L. Bosch, J. G. Huisman, and M. Tersmette. 1992. Phenotype-associated env gene variation among eight related human immunodeficiency virus type 1 clones: evidence for in vivo recombination and determinants of cytotropism outside the V3 domain. J. Virol. 66:6175-6180.
-
(1992)
J. Virol.
, vol.66
, pp. 6175-6180
-
-
Groenink, M.1
Andeweg, A.C.2
Fouchier, R.A.M.3
Broersen, S.M.4
Van Der Jagt, R.C.M.5
Schuitemaker, H.6
De Goede, R.E.Y.7
Bosch, M.L.8
Huisman, J.G.9
Tersmette, M.10
-
21
-
-
0027205624
-
Relation of phenotype evolution of HIV-1 to envelope V2 configuration
-
Groenink, M., R. A. M. Fouchier, S. M. Broersen, C. H. Baker, M. Koot, A. B. van 't Wout, J. G. Huisman, F. Miedema, M. Tersmette, and H. Schuitemaker. 1993. Relation of phenotype evolution of HIV-1 to envelope V2 configuration. Science 260:1513-1516.
-
(1993)
Science
, vol.260
, pp. 1513-1516
-
-
Groenink, M.1
Fouchier, R.A.M.2
Broersen, S.M.3
Baker, C.H.4
Koot, M.5
Van 'T Wout, A.B.6
Huisman, J.G.7
Miedema, F.8
Tersmette, M.9
Schuitemaker, H.10
-
23
-
-
0025017950
-
The human immunodeficiency virus type 2 vpr gene is essential for productive infection of human macrophages
-
Hattori, N., F. Michaels, K. Fargnoli, L. Marcon, R. C. Gallo, and G. Franchini. 1990. The human immunodeficiency virus type 2 vpr gene is essential for productive infection of human macrophages. Proc. Natl. Acad. Sci. USA 87:8080-8084.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 8080-8084
-
-
Hattori, N.1
Michaels, F.2
Fargnoli, K.3
Marcon, L.4
Gallo, R.C.5
Franchini, G.6
-
24
-
-
0025783669
-
Identification of the envelope V3 loop as the primary determinant of cell tropism in HIV-1
-
Hwang, S. S., T. J. Boyle, H. K. Lyerly, and B. R. Cullen. 1991. Identification of the envelope V3 loop as the primary determinant of cell tropism in HIV-1. Science 253:71-74.
-
(1991)
Science
, vol.253
, pp. 71-74
-
-
Hwang, S.S.1
Boyle, T.J.2
Lyerly, H.K.3
Cullen, B.R.4
-
25
-
-
0025743306
-
Importance of the nef gene for maintenance of high virus loads and for development of AIDS
-
Kestler, H. W., D. J. Ringler, K. Mori, D. L. Panicali, P. K. Sehgal, M. D. Daniel, and R. C. Desrosiers. 1991. Importance of the nef gene for maintenance of high virus loads and for development of AIDS. Cell 65:651-662.
-
(1991)
Cell
, vol.65
, pp. 651-662
-
-
Kestler, H.W.1
Ringler, D.J.2
Mori, K.3
Panicali, D.L.4
Sehgal, P.K.5
Daniel, M.D.6
Desrosiers, R.C.7
-
26
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences
-
Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
27
-
-
0027537480
-
+ cell depletion and progression to AIDS
-
+ cell depletion and progression to AIDS. Ann. Intern. Med. 118:681-688.
-
(1993)
Ann. Intern. Med.
, vol.118
, pp. 681-688
-
-
Koot, M.1
Keet, I.P.M.2
Vos, A.H.V.3
De Goede, R.E.Y.4
Roos, M.T.L.5
Coutinho, R.A.6
Miedema, F.7
Schellekens, P.T.A.8
Tersmette, M.9
-
28
-
-
19144365480
-
Relation between changes in cellular load, evolution of viral phenotype, and the clonal composition of virus populations in the course of human immunodeficiency virus type 1 infection
-
Koot, M., A. B. van 't Wout, N. A. Kootstra, R. E. Y. De Goede, M. Tersmette, and H. Schuitemaker. 1996. Relation between changes in cellular load, evolution of viral phenotype, and the clonal composition of virus populations in the course of human immunodeficiency virus type 1 infection. J. Infect. Dis. 173:349-354.
-
(1996)
J. Infect. Dis.
, vol.173
, pp. 349-354
-
-
Koot, M.1
Van 'T Wout, A.B.2
Kootstra, N.A.3
De Goede, R.E.Y.4
Tersmette, M.5
Schuitemaker, H.6
-
29
-
-
0026533899
-
HIV-1 biological phenotype in long term infected individuals, evaluated with an MT-2 cocultivation assay
-
Koot, M., A. H. V. Vos, I. P. M. Keet, R. E. Y. De Goede, W. Dercksen, F. G. Terpstra, R. A. Coutinho, F. Miedema, and M. Tersmette. 1992. HIV-1 biological phenotype in long term infected individuals, evaluated with an MT-2 cocultivation assay. AIDS 6:49-54.
-
(1992)
AIDS
, vol.6
, pp. 49-54
-
-
Koot, M.1
Vos, A.H.V.2
Keet, I.P.M.3
De Goede, R.E.Y.4
Dercksen, W.5
Terpstra, F.G.6
Coutinho, R.A.7
Miedema, F.8
Tersmette, M.9
-
30
-
-
0031031452
-
CD4, CXCR-4, and CCR5 dependencies for infections by primary patient and laboratory-adapted isolates of human immunodeficiency virus type 1
-
Kozak, S. L., E. J. Platt, N. Madani, F. E. Ferro, K. Peden, and D. Kabat. 1997. CD4, CXCR-4, and CCR5 dependencies for infections by primary patient and laboratory-adapted isolates of human immunodeficiency virus type 1. J. Virol. 71:873-882.
-
(1997)
J. Virol.
, vol.71
, pp. 873-882
-
-
Kozak, S.L.1
Platt, E.J.2
Madani, N.3
Ferro, F.E.4
Peden, K.5
Kabat, D.6
-
31
-
-
0026915406
-
Evolution of the V3 envelope domain in proviral sequences and isolates of human immunodeficiency virus type 1 during transition of the viral biological phenotype
-
Kuiken, C. L., J. J. De Jong, E. Baan, W. Keulen, M. Tersmette, and J. Goudsmit. 1992. Evolution of the V3 envelope domain in proviral sequences and isolates of human immunodeficiency virus type 1 during transition of the viral biological phenotype. J. Virol. 66:4622-4627.
-
(1992)
J. Virol.
, vol.66
, pp. 4622-4627
-
-
Kuiken, C.L.1
De Jong, J.J.2
Baan, E.3
Keulen, W.4
Tersmette, M.5
Goudsmit, J.6
-
32
-
-
0028294049
-
MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers
-
Kumar, S., K. Tamura, and M. Nei. 1994. MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers. CABIOS 10:189-192.
-
(1994)
CABIOS
, vol.10
, pp. 189-192
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
33
-
-
15844388931
-
Homozygous defect in HIV-1 coreceptor accounts for resistance of some multiply-exposed individuals to HIV-1 infection
-
Liu, R., W. A. Paxton, S. Choe, D. Ceradini, S. R. Martin, R. Horuk, M. E. MacDonald, H. Stuhlmann, R. A. Koup, and N. R. Landau. 1996. Homozygous defect in HIV-1 coreceptor accounts for resistance of some multiply-exposed individuals to HIV-1 infection. Cell 86:1-20.
-
(1996)
Cell
, vol.86
, pp. 1-20
-
-
Liu, R.1
Paxton, W.A.2
Choe, S.3
Ceradini, D.4
Martin, S.R.5
Horuk, R.6
MacDonald, M.E.7
Stuhlmann, H.8
Koup, R.A.9
Landau, N.R.10
-
34
-
-
0028826072
-
Intrahost human immunodeficiency virus type 1 evolution is related to the length of the immunocompetent period
-
Lukashov, V. V., C. L. Kuiken, and J. Goudsmit. 1995. Intrahost human immunodeficiency virus type 1 evolution is related to the length of the immunocompetent period. J. Virol. 69:6911-6916.
-
(1995)
J. Virol.
, vol.69
, pp. 6911-6916
-
-
Lukashov, V.V.1
Kuiken, C.L.2
Goudsmit, J.3
-
35
-
-
0031058043
-
Evolution of human immunodeficiency virus type 1 env sequence variation in patients with diverse rates of disease progression and T-cell function
-
McDonald, R. A., D. L. Mayers, R. C.-Y. Chung, K. F. Wagner, S. Ratto-Kim, D. L. Birx, and N. L. Michael. 1997. Evolution of human immunodeficiency virus type 1 env sequence variation in patients with diverse rates of disease progression and T-cell function. J. Virol. 71:1871-1879.
-
(1997)
J. Virol.
, vol.71
, pp. 1871-1879
-
-
McDonald, R.A.1
Mayers, D.L.2
Chung, R.C.-Y.3
Wagner, K.F.4
Ratto-Kim, S.5
Birx, D.L.6
Michael, N.L.7
-
36
-
-
0026476474
-
Relationship of human immunodeficiency virus type 1 sequence heterogeneity to stage of disease
-
McNearney, T., Z. Hornickova, R. Markham, A. Birdwell, M. Arens, A. J. Saah, and L. Ratner. 1992. Relationship of human immunodeficiency virus type 1 sequence heterogeneity to stage of disease. Proc. Natl. Acad. Sci. USA 89:10247-10251.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 10247-10251
-
-
McNearney, T.1
Hornickova, Z.2
Markham, R.3
Birdwell, A.4
Arens, M.5
Saah, A.J.6
Ratner, L.7
-
37
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous substitutions
-
Nei, M., and T. Gojobori. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous substitutions. Mol. Biol. Evol. 3:418-426.
-
(1986)
Mol. Biol. Evol.
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
38
-
-
0025065099
-
HIV-1 tropism for mononuclear phagocytes can be determined by regions of gp120 outside the CD4-binding domain
-
O'Brien, W. A., Y. Koyanagi, A. Namazie, J. Q. Zhao, A. Diagne, K. Idler, J. A. Zack, and I. S. Y. Chen. 1990. HIV-1 tropism for mononuclear phagocytes can be determined by regions of gp120 outside the CD4-binding domain. Nature 348:69-73.
-
(1990)
Nature
, vol.348
, pp. 69-73
-
-
O'Brien, W.A.1
Koyanagi, Y.2
Namazie, A.3
Zhao, J.Q.4
Diagne, A.5
Idler, K.6
Zack, J.A.7
Chen, I.S.Y.8
-
39
-
-
0025030676
-
Broad spectrum of in vivo forward mutations, hypermutations, and mutational hotspots in a retroviral shuttle vector after a single replication cycle: Substitutions, frameshifts, and hypermutations
-
Pathak, V. K., and H. M. Temin. 1990. Broad spectrum of in vivo forward mutations, hypermutations, and mutational hotspots in a retroviral shuttle vector after a single replication cycle: substitutions, frameshifts, and hypermutations Proc. Natl. Acad. Sci. USA 87:6019-6023.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 6019-6023
-
-
Pathak, V.K.1
Temin, H.M.2
-
40
-
-
0029967721
-
HIV-1 dynamics in vivo: Virion clearance rate, infected cell life-span, and viral generation time
-
Perelson, A. S., A. U. Neumann, M. Markowitz, J. M. Leonard, and D. D. Ho. 1996. HIV-1 dynamics in vivo: virion clearance rate, infected cell life-span, and viral generation time. Science 271:1582-1586.
-
(1996)
Science
, vol.271
, pp. 1582-1586
-
-
Perelson, A.S.1
Neumann, A.U.2
Markowitz, M.3
Leonard, J.M.4
Ho, D.D.5
-
41
-
-
0024267430
-
Fidelity of HIV-1 reverse transcriptase
-
Preston, B. D., B. J. Poiesz, and L. A. Loeb. 1988. Fidelity of HIV-1 reverse transcriptase. Science 242:1168-1171.
-
(1988)
Science
, vol.242
, pp. 1168-1171
-
-
Preston, B.D.1
Poiesz, B.J.2
Loeb, L.A.3
-
42
-
-
0025215849
-
Reverse transcriptases and genomic variability the accuracy of DNA replication is enzyme specific and sequence dependent
-
Ricchetti, M., and H. Buc. 1990. Reverse transcriptases and genomic variability the accuracy of DNA replication is enzyme specific and sequence dependent. EMBO J. 9:1583-1593.
-
(1990)
EMBO J.
, vol.9
, pp. 1583-1593
-
-
Ricchetti, M.1
Buc, H.2
-
43
-
-
0024273119
-
The accuracy of reverse transcriptase from HIV-1
-
Roberts, J. D., K. Bebenek, and T. A. Kunkel. 1988. The accuracy of reverse transcriptase from HIV-1. Science 242:1171-1173.
-
(1988)
Science
, vol.242
, pp. 1171-1173
-
-
Roberts, J.D.1
Bebenek, K.2
Kunkel, T.A.3
-
44
-
-
0028939919
-
Recombination in HIV-1
-
Robertson, D. L., P. M. Sharp, F. E. McCutchan, and B. H. Hahn. 1995. Recombination in HIV-1. Nature 374:124-126.
-
(1995)
Nature
, vol.374
, pp. 124-126
-
-
Robertson, D.L.1
Sharp, P.M.2
McCutchan, F.E.3
Hahn, B.H.4
-
45
-
-
0026599703
-
Viral phenotype and immune response in primary human immunodeficiency virus type 1 (HIV-1) infection
-
Roos, M. T. L., J. M. A. Lange, R. E. Y. De Goede, R. A. Coutinho, P. T. A. Schellekens, F. Miedema, and M. Tersmette. 1992. Viral phenotype and immune response in primary human immunodeficiency virus type 1 (HIV-1) infection. J. Infect. Dis. 165:427-432.
-
(1992)
J. Infect. Dis.
, vol.165
, pp. 427-432
-
-
Roos, M.T.L.1
Lange, J.M.A.2
De Goede, R.E.Y.3
Coutinho, R.A.4
Schellekens, P.T.A.5
Miedema, F.6
Tersmette, M.7
-
46
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
47
-
-
0025931572
-
Recombinational analysis of a natural noncytopathic human immunodeficiency virus type 1 (HIV-1) isolate: Role of the vif gene in HIV-1 infection kinetics and cytopathicity
-
Sakai, K., X. Ma, I. Gordienko, and D. J. Volsky. 1991. Recombinational analysis of a natural noncytopathic human immunodeficiency virus type 1 (HIV-1) isolate: role of the vif gene in HIV-1 infection kinetics and cytopathicity. J. Virol. 65:5765-5773.
-
(1991)
J. Virol.
, vol.65
, pp. 5765-5773
-
-
Sakai, K.1
Ma, X.2
Gordienko, I.3
Volsky, D.J.4
-
48
-
-
16044373004
-
Resistance to HIV-1 infection in caucasian individuals bearing mutant alleles of the CCR-5 chemokine receptor gene
-
Samson, M., F. Libert, B. J. Doranz, J. Rucker, C. Liesnard, C. Farber, S. Saragosti, C. Lapouméroulie, J. Cognaux, C. Forceille, G. Muyldermans, C. Verhofstede, G. Burtonboy, M. Georges, T. Imai, S. Rana, Y. Yi, R. J. Smyth, R. G. Collman, R. W. Doms, G. Vassart, and M. Parmentier. 1996. Resistance to HIV-1 infection in caucasian individuals bearing mutant alleles of the CCR-5 chemokine receptor gene. Nature 382:722-725.
-
(1996)
Nature
, vol.382
, pp. 722-725
-
-
Samson, M.1
Libert, F.2
Doranz, B.J.3
Rucker, J.4
Liesnard, C.5
Farber, C.6
Saragosti, S.7
Lapouméroulie, C.8
Cognaux, J.9
Forceille, C.10
Muyldermans, G.11
Verhofstede, C.12
Burtonboy, G.13
Georges, M.14
Imai, T.15
Rana, S.16
Yi, Y.17
Smyth, R.J.18
Collman, R.G.19
Doms, R.W.20
Vassart, G.21
Parmentier, M.22
more..
-
49
-
-
0026600926
-
Biological phenotype of human immunodeficiency virus type 1 clones at different stages of infection: Progression of disease is associated with a shift from monocytotropic to T-cell-tropic virus populations
-
Schuitemaker, H., M. Root, N. A. Kootstra, M. W. Dercksen, R. E. Y. De Goede, R. P. Van Steenwijk, J. M. A. Lange, J. K. M. Eeftinck Schattenkerk, F. Miedema, and M. Tersmette. 1992. Biological phenotype of human immunodeficiency virus type 1 clones at different stages of infection: progression of disease is associated with a shift from monocytotropic to T-cell-tropic virus populations. J. Virol. 66:1354-1360.
-
(1992)
J. Virol.
, vol.66
, pp. 1354-1360
-
-
Schuitemaker, H.1
Root, M.2
Kootstra, N.A.3
Dercksen, M.W.4
De Goede, R.E.Y.5
Van Steenwijk, R.P.6
Lange, J.M.A.7
Eeftinck Schattenkerk, J.K.M.8
Miedema, F.9
Tersmette, M.10
-
50
-
-
0026070668
-
Monocytotropic human immunodeficiency virus 1 (HIV-1) variants detectable in all stages of HIV infection lack T-cell line tropism and syncytium-inducing ability in primary T-cell culture
-
Schuitemaker, H., N. A. Kootstra, R. E. Y. De Goede, F. De Wolf, F. Miedema, and M. Tersmette. 1991. Monocytotropic human immunodeficiency virus 1 (HIV-1) variants detectable in all stages of HIV infection lack T-cell line tropism and syncytium-inducing ability in primary T-cell culture. J. Virol. 65:356-363.
-
(1991)
J. Virol.
, vol.65
, pp. 356-363
-
-
Schuitemaker, H.1
Kootstra, N.A.2
De Goede, R.E.Y.3
De Wolf, F.4
Miedema, F.5
Tersmette, M.6
-
51
-
-
33748126712
-
Determinants of long-term non-progression: The relative contribution of viral burden and strain variation
-
abstr. A390. Vancouver, British Columbia, Canada
-
Sheppard, H. W., J. Krowka, M. Ascher, B. Cuevas, D. Dondero, and E. Lu. 1996. Determinants of long-term non-progression: the relative contribution of viral burden and strain variation, abstr. A390. In Abstracts of the XI International Conference on AIDS. Vancouver, British Columbia, Canada.
-
(1996)
XI International Conference on AIDS
-
-
Sheppard, H.W.1
Krowka, J.2
Ascher, M.3
Cuevas, B.4
Dondero, D.5
Lu, E.6
-
52
-
-
0026089184
-
Macrophage and T cell-line tropisms of HIV-1 are determined by specific regions of the envelope gp120 gene
-
Shioda, T., J. A. Levy, and C. Cheng-Mayer. 1991. Macrophage and T cell-line tropisms of HIV-1 are determined by specific regions of the envelope gp120 gene. Nature 349:167-169.
-
(1991)
Nature
, vol.349
, pp. 167-169
-
-
Shioda, T.1
Levy, J.A.2
Cheng-Mayer, C.3
-
53
-
-
0026754683
-
Small amino acid changes in the V3 hypervariable region of gp120 can affect the T-cell-line and macrophage tropism of human immunodeficiency virus type 1
-
Shioda, T., J. A. Levy, and C. Cheng-Mayer. 1992. Small amino acid changes in the V3 hypervariable region of gp120 can affect the T-cell-line and macrophage tropism of human immunodeficiency virus type 1. Proc. Natl. Acad. Sci. USA 89:9434-9438.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 9434-9438
-
-
Shioda, T.1
Levy, J.A.2
Cheng-Mayer, C.3
-
54
-
-
0025253821
-
Analysis of sequence diversity in hypervariable regions of the external glycoprotein of human immunodeficiency virus type 1
-
Simmonds, P., P. Balfe, C. A. Ludlam, J. O. Bishop, and A. J. L. Brown. 1990. Analysis of sequence diversity in hypervariable regions of the external glycoprotein of human immunodeficiency virus type 1. J. Virol. 64:5848-5850.
-
(1990)
J. Virol.
, vol.64
, pp. 5848-5850
-
-
Simmonds, P.1
Balfe, P.2
Ludlam, C.A.3
Bishop, J.O.4
Brown, A.J.L.5
-
55
-
-
10344266976
-
Primary, syncytium-inducing human immunodeficiency virus type 1 isolates are dual-tropic and most can use either LESTR or CCR5 as co-receptors for virus entry
-
Simmons, G., D. Wilkinson, J. D. Reeves, M. T. Dittmar, S. Beddows, J. Weber, G. Carnegie, U. Desselberger, P. W. Gray, R. A. Weiss, and P. R. Clapham. 1996. Primary, syncytium-inducing human immunodeficiency virus type 1 isolates are dual-tropic and most can use either LESTR or CCR5 as co-receptors for virus entry. J. Virol. 70:8355-8360.
-
(1996)
J. Virol.
, vol.70
, pp. 8355-8360
-
-
Simmons, G.1
Wilkinson, D.2
Reeves, J.D.3
Dittmar, M.T.4
Beddows, S.5
Weber, J.6
Carnegie, G.7
Desselberger, U.8
Gray, P.W.9
Weiss, R.A.10
Clapham, P.R.11
-
56
-
-
0024536114
-
Evidence for a role of virulent human immunodeficiency virus (HIV) variants in the pathogenesis of acquired immunodeficiency syndrome: Studies on sequential HIV isolates
-
Tersmette, M., R. A. Gruters, F. De Wolf, R. E. Y. De Goede, J. M. A. Lange, P. T. A. Schellekens, J. Goudsmit, J. G. Huisman, and F. Miedema. 1989. Evidence for a role of virulent human immunodeficiency virus (HIV) variants in the pathogenesis of acquired immunodeficiency syndrome: studies on sequential HIV isolates. J. Virol. 63:2118-2125.
-
(1989)
J. Virol.
, vol.63
, pp. 2118-2125
-
-
Tersmette, M.1
Gruters, R.A.2
De Wolf, F.3
De Goede, R.E.Y.4
Lange, J.M.A.5
Schellekens, P.T.A.6
Goudsmit, J.7
Huisman, J.G.8
Miedema, F.9
-
57
-
-
0001238550
-
Functional role of human immunodeficiency virus type 1 vpu
-
Terwilliger, E. F., E. A. Cohen, Y. Lu, J. G. Sodroski, and W. A. Haseltine. 1989. Functional role of human immunodeficiency virus type 1 vpu. Proc. Natl. Acad. Sci. USA 86:5163-5167.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 5163-5167
-
-
Terwilliger, E.F.1
Cohen, E.A.2
Lu, Y.3
Sodroski, J.G.4
Haseltine, W.A.5
-
58
-
-
0028091755
-
Macrophage-tropic variants initiate human immunodeficiency virus type 1 infection after sexual, parenteral and vertical transmission
-
van 't Wout, A. B., N. A. Kootstra, G. A. Mulder-Kampinga, N. Albrecht-van Lent, H. J. Scherpbier, J. Veenstra, K. Boer, R. A. Coutinho, F. Miedema, and H. Schuitemaker. 1994. Macrophage-tropic variants initiate human immunodeficiency virus type 1 infection after sexual, parenteral and vertical transmission. J. Clin. Invest. 94:2060-2067.
-
(1994)
J. Clin. Invest.
, vol.94
, pp. 2060-2067
-
-
Van 'T Wout, A.B.1
Kootstra, N.A.2
Mulder-Kampinga, G.A.3
Albrecht-van Lent, N.4
Scherpbier, H.J.5
Veenstra, J.6
Boer, K.7
Coutinho, R.A.8
Miedema, F.9
Schuitemaker, H.10
-
59
-
-
15844385082
-
Adaptive evolution of human immunodeficiency virus type 1 during the natural course of infection
-
Wolinsky, S. M., B. T. M. Korber, A. U. Neumann, M. Daniels, K. J. Kunstman, A. J. Whetsell, M. R. Furtado, Y. Cao, D. D. Ho, J. T. Safrit, and R. A. Koup. 1996. Adaptive evolution of human immunodeficiency virus type 1 during the natural course of infection. Science 272:537-542.
-
(1996)
Science
, vol.272
, pp. 537-542
-
-
Wolinsky, S.M.1
Korber, B.T.M.2
Neumann, A.U.3
Daniels, M.4
Kunstman, K.J.5
Whetsell, A.J.6
Furtado, M.R.7
Cao, Y.8
Ho, D.D.9
Safrit, J.T.10
Koup, R.A.11
-
60
-
-
0031041894
-
Host-specific driving force in human immunodeficiency virus type 1 evolution in vivo
-
Zhang, L., R. S. Diaz, D. D. Ho, J. W. Mosley, M. P. Busch, and A. Mayer. 1997. Host-specific driving force in human immunodeficiency virus type 1 evolution in vivo. J. Virol. 71:2555-2561.
-
(1997)
J. Virol.
, vol.71
, pp. 2555-2561
-
-
Zhang, L.1
Diaz, R.S.2
Ho, D.D.3
Mosley, J.W.4
Busch, M.P.5
Mayer, A.6
-
61
-
-
16044364731
-
HIV-1 subtype and second-receptor use
-
Zhang, L., Y. Huang, T. He, Y. Cao, and D. D. Ho. 1996. HIV-1 subtype and second-receptor use. Nature 383:768.
-
(1996)
Nature
, vol.383
, pp. 768
-
-
Zhang, L.1
Huang, Y.2
He, T.3
Cao, Y.4
Ho, D.D.5
-
62
-
-
0027422278
-
Genotypic and phenotypic characterization of HIV-1 in patients with primary infection
-
Zhu, T., H. Mo, N. Wang, D. S. Nam, Y. Cao, R. A. Koup, and D. D. Ho. 1993. Genotypic and phenotypic characterization of HIV-1 in patients with primary infection. Science 261:1179-1181.
-
(1993)
Science
, vol.261
, pp. 1179-1181
-
-
Zhu, T.1
Mo, H.2
Wang, N.3
Nam, D.S.4
Cao, Y.5
Koup, R.A.6
Ho, D.D.7
|