메뉴 건너뛰기




Volumn 31, Issue 3, 2003, Pages 893-898

Sir2p suppresses recombination of replication forks stalled at the replication fork barrier of ribosomal DNA in Saccharomyces cerevisiae

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE DEACETYLASE; PLASMID DNA; RIBOSOME DNA;

EID: 0037329820     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkg188     Document Type: Review
Times cited : (33)

References (50)
  • 2
    • 0002844816 scopus 로고    scopus 로고
    • Mechanisms for completing DNA replication
    • DePamphilis,M.L. (ed.), Cold Spring Harbor Laboratory Press, New York, NY
    • Bastia,D. and Mohanty,B.K. (1996) Mechanisms for completing DNA replication. In DePamphilis,M.L. (ed.), DNA Replication in Eukaryotic Cells. Cold Spring Harbor Laboratory Press, New York, NY, pp. 177-215.
    • (1996) DNA Replication in Eukaryotic Cells , pp. 177-215
    • Bastia, D.1    Mohanty, B.K.2
  • 3
    • 0024277959 scopus 로고
    • Identification of the DNA sequence from E. coli terminus region that halts replication forks
    • Hill,T.M., Pelletier,A.J., Tecklenburg,M.L. and Kuempel,P.L. (1988) Identification of the DNA sequence from E. coli terminus region that halts replication forks. Cell, 55, 459-466.
    • (1988) Cell , vol.55 , pp. 459-466
    • Hill, T.M.1    Pelletier, A.J.2    Tecklenburg, M.L.3    Kuempel, P.L.4
  • 4
    • 0024276903 scopus 로고
    • When polymerases collide: Replication and the transcriptional organization of the E. coli chromosome
    • Brewer,B.J. (1988) When polymerases collide: replication and the transcriptional organization of the E. coli chromosome. Cell, 53, 679-686.
    • (1988) Cell , vol.53 , pp. 679-686
    • Brewer, B.J.1
  • 6
    • 0033954246 scopus 로고    scopus 로고
    • Replication fork pausing and recombination or "gimme a break"
    • Rothstein,R., Michel,B. and Gangloff,S. (2000) Replication fork pausing and recombination or "gimme a break". Genes Dev., 14, 1-10.
    • (2000) Genes Dev. , vol.14 , pp. 1-10
    • Rothstein, R.1    Michel, B.2    Gangloff, S.3
  • 7
    • 0031025093 scopus 로고    scopus 로고
    • DNA double-strand breaks caused by replication arrest
    • Michel,B., Ehrlich,S.D. and Uzest,M. (1997) DNA double-strand breaks caused by replication arrest. EMBO J., 16, 430-438.
    • (1997) EMBO J. , vol.16 , pp. 430-438
    • Michel, B.1    Ehrlich, S.D.2    Uzest, M.3
  • 10
    • 0018423970 scopus 로고
    • Yeast ribosomal DNA genes are located on chromosome XII
    • Petes,T.D. (1979) Yeast ribosomal DNA genes are located on chromosome XII. Proc. Natl Acad. Sci. USA, 76, 410-414.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 410-414
    • Petes, T.D.1
  • 11
    • 0024291357 scopus 로고
    • A replication fork barrier at the 3� end of yeast ribosomal RNA genes
    • Brewer,B.J. and Fangman,W.L. (1988) A replication fork barrier at the 3� end of yeast ribosomal RNA genes. Cell, 55, 637-643.
    • (1988) Cell , vol.55 , pp. 637-643
    • Brewer, B.J.1    Fangman, W.L.2
  • 12
    • 0026645804 scopus 로고
    • The arrest of replication forks in the rDNA of yeast occurs independently of transcription
    • Brewer,B.J., Lockshon,D. and Fangman,W.L. (1992) The arrest of replication forks in the rDNA of yeast occurs independently of transcription. Cell, 71, 267-276.
    • (1992) Cell , vol.71 , pp. 267-276
    • Brewer, B.J.1    Lockshon, D.2    Fangman, W.L.3
  • 13
    • 0023806623 scopus 로고
    • Organization of replication of ribosomal DNA in Saccharomyces cerevisiae
    • Linskens,M.H.K. and Huberman,J.A. (1988) Organization of replication of ribosomal DNA in Saccharomyces cerevisiae. Mol. Cell. Biol., 8, 4927-4935.
    • (1988) Mol. Cell. Biol. , vol.8 , pp. 4927-4935
    • Linskens, M.H.K.1    Huberman, J.A.2
  • 14
    • 0028856363 scopus 로고
    • Requirements for activity of the yeast mitotic recombination hotspot HOT1: RNA polymerase I and multiple cis-acting sequences
    • Huang,G.S. and Keil,R.L. (1995) Requirements for activity of the yeast mitotic recombination hotspot HOT1: RNA polymerase I and multiple cis-acting sequences. Genetics, 141, 845-855.
    • (1995) Genetics , vol.141 , pp. 845-855
    • Huang, G.S.1    Keil, R.L.2
  • 15
    • 0030133624 scopus 로고    scopus 로고
    • A yeast gene product, Fob1 protein, required for both replication fork blocking and recombinational hotspot activities
    • Kobayashi,T. and Horiuchi,T. (1996) A yeast gene product, Fob1 protein, required for both replication fork blocking and recombinational hotspot activities. Genes Cells, 1, 465-474.
    • (1996) Genes Cells , vol.1 , pp. 465-474
    • Kobayashi, T.1    Horiuchi, T.2
  • 17
    • 0036194936 scopus 로고    scopus 로고
    • Replication fork block protein, Fob1, acts as an rDNA region specific recombinator in S.cerevisiae
    • Johzuka,K. and Horiuchi,T. (2002) Replication fork block protein, Fob1, acts as an rDNA region specific recombinator in S.cerevisiae. Genes Cells, 7, 99-113.
    • (2002) Genes Cells , vol.7 , pp. 99-113
    • Johzuka, K.1    Horiuchi, T.2
  • 18
    • 0032535478 scopus 로고    scopus 로고
    • Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: Requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase I
    • Kobayashi,T., Heck,D.J., Nomura,M. and Horiuchi,T. (1998) Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase I. Genes Dev., 12, 3821-3830.
    • (1998) Genes Dev. , vol.12 , pp. 3821-3830
    • Kobayashi, T.1    Heck, D.J.2    Nomura, M.3    Horiuchi, T.4
  • 19
    • 0034749348 scopus 로고    scopus 로고
    • Identification of DNA cis elements essential for expansion of ribosomal DNA repeats in Saccharomyces cerevisiae
    • Kobayashi,T., Nomura,M. and Horiuchi,T. (2001) Identification of DNA cis elements essential for expansion of ribosomal DNA repeats in Saccharomyces cerevisiae. Mol. Cell. Biol., 21, 136-147.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 136-147
    • Kobayashi, T.1    Nomura, M.2    Horiuchi, T.3
  • 20
    • 0034085624 scopus 로고    scopus 로고
    • Ribosomal DNA replication fork barrier and HOT1 recombination hot spot: Shared sequences but independent activities
    • Ward,T.R., Hoang,M.L., Prusty,R., Lau,C.K., Keil,R.L., Fangman,W.L. and Brewer,B.J. (2000) Ribosomal DNA replication fork barrier and HOT1 recombination hot spot: shared sequences but independent activities. Mol. Cell. Biol., 20, 4948-4957.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 4948-4957
    • Ward, T.R.1    Hoang, M.L.2    Prusty, R.3    Lau, C.K.4    Keil, R.L.5    Fangman, W.L.6    Brewer, B.J.7
  • 21
    • 0033925785 scopus 로고    scopus 로고
    • Architecture of the replication fork stalled at the 3� end of yeast ribosomal genes
    • Gruber,M., Wellinger,R.E. and Sogo,J.M. (2000) Architecture of the replication fork stalled at the 3� end of yeast ribosomal genes. Mol. Cell. Biol., 20, 5777-5787.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 5777-5787
    • Gruber, M.1    Wellinger, R.E.2    Sogo, J.M.3
  • 22
    • 0035861202 scopus 로고    scopus 로고
    • The molecular biology of the SIR proteins
    • Gasser,S.M. and Cockell,M.M. (2001) The molecular biology of the SIR proteins. Gene, 279, 1-16.
    • (2001) Gene , vol.279 , pp. 1-16
    • Gasser, S.M.1    Cockell, M.M.2
  • 23
    • 0024536650 scopus 로고
    • A new role for a yeast transcriptional silencer gene, SIR2, in regulation of recombination in ribosomal DNA
    • Gottlieb,S. and Esposito,R.E. (1989) A new role for a yeast transcriptional silencer gene, SIR2, in regulation of recombination in ribosomal DNA. Cell, 56, 771-776.
    • (1989) Cell , vol.56 , pp. 771-776
    • Gottlieb, S.1    Esposito, R.E.2
  • 24
    • 0031056907 scopus 로고    scopus 로고
    • An unusual form of transcriptional silencing in yeast ribosomal DNA
    • Smith,J.S. and Boeke,J.D. (1997) An unusual form of transcriptional silencing in yeast ribosomal DNA. Genes Dev., 11, 241-254.
    • (1997) Genes Dev. , vol.11 , pp. 241-254
    • Smith, J.S.1    Boeke, J.D.2
  • 25
    • 0030831573 scopus 로고    scopus 로고
    • Direct evidence for SIR2 modulation of chromatin structure in yeast rDNA
    • Fritze,C.E., Verschueren,K., Strich,R. and Easton-Esposito,R. (1997) Direct evidence for SIR2 modulation of chromatin structure in yeast rDNA. EMBO J., 16, 6495-6509.
    • (1997) EMBO J. , vol.16 , pp. 6495-6509
    • Fritze, C.E.1    Verschueren, K.2    Strich, R.3    Easton-Esposito, R.4
  • 26
    • 0031827438 scopus 로고    scopus 로고
    • Distribution of a limited Sir2 protein pool regulates the strength of yeast rDNA silencing and is modulated by Sir4p
    • Smith,J.S., Brachmann,C.B., Pillus,L. and Boeke,J.D. (1998) Distribution of a limited Sir2 protein pool regulates the strength of yeast rDNA silencing and is modulated by Sir4p. Genetics, 149, 1205-1219.
    • (1998) Genetics , vol.149 , pp. 1205-1219
    • Smith, J.S.1    Brachmann, C.B.2    Pillus, L.3    Boeke, J.D.4
  • 27
    • 0033214237 scopus 로고    scopus 로고
    • The SIR2/3/4 complex and SIR2 alone promote longevity in Saccharomyces cerevisiae by two different mechanisms
    • Kaeberlein,M., McVey,M. and Guarente,L. (1999) The SIR2/3/4 complex and SIR2 alone promote longevity in Saccharomyces cerevisiae by two different mechanisms. Genes Dev., 13, 2570-2580.
    • (1999) Genes Dev. , vol.13 , pp. 2570-2580
    • Kaeberlein, M.1    McVey, M.2    Guarente, L.3
  • 28
    • 0032831936 scopus 로고    scopus 로고
    • Modulation of life-span by histone deacetylase genes in Saccharomyces cerevisiae
    • Kim,S., Benguria,A., Lai,C.Y. and Jazwinski,S.M. (1999) Modulation of life-span by histone deacetylase genes in Saccharomyces cerevisiae. Mol. Biol. Cell, 10, 3125-3136.
    • (1999) Mol. Biol. Cell , vol.10 , pp. 3125-3136
    • Kim, S.1    Benguria, A.2    Lai, C.Y.3    Jazwinski, S.M.4
  • 29
    • 0036006756 scopus 로고    scopus 로고
    • hpr1 (Delta) affects ribosomal DNA recombination and cell life span in Saccharomyces cerevisiae
    • Merker,R.J. and Klein,H.L. (2002) hpr1 (Delta) affects ribosomal DNA recombination and cell life span in Saccharomyces cerevisiae. Mol. Cell. Biol., 22, 421-429.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 421-429
    • Merker, R.J.1    Klein, H.L.2
  • 30
    • 0033974685 scopus 로고    scopus 로고
    • Two paralogs involved in transcriptional silencing that antagonistically control yeast life span
    • Roy,N. and Runge,K.W. (2000) Two paralogs involved in transcriptional silencing that antagonistically control yeast life span. Curr. Biol., 10, 111-114.
    • (2000) Curr. Biol. , vol.10 , pp. 111-114
    • Roy, N.1    Runge, K.W.2
  • 31
    • 0030820491 scopus 로고    scopus 로고
    • Accelerated aging and nucleolar fragmentation in yeast sgs1 mutants
    • Sinclair,D.A., Mills,K. and Guarente,L. (1997) Accelerated aging and nucleolar fragmentation in yeast sgs1 mutants. Science, 277, 1313-1316.
    • (1997) Science , vol.277 , pp. 1313-1316
    • Sinclair, D.A.1    Mills, K.2    Guarente, L.3
  • 33
    • 0032750220 scopus 로고    scopus 로고
    • Diverse and dynamic functions of the Sir silencing complex
    • Guarente,L. (1999) Diverse and dynamic functions of the Sir silencing complex. Nature Genet., 23, 281-285.
    • (1999) Nature Genet. , vol.23 , pp. 281-285
    • Guarente, L.1
  • 34
    • 0020529962 scopus 로고
    • Transformation of intact yeast cells treated with alkali cations
    • Ito,H., Fukuda,Y., Murata,K. and Kimura,A. (1983) Transformation of intact yeast cells treated with alkali cations. J. Bacteriol., 153, 163-168.
    • (1983) J. Bacteriol. , vol.153 , pp. 163-168
    • Ito, H.1    Fukuda, Y.2    Murata, K.3    Kimura, A.4
  • 36
    • 0023646792 scopus 로고
    • The localization of replication origins on ARS plasmids in S. cerevisiae
    • Brewer,B.J. and Fangman,W.L. (1987) The localization of replication origins on ARS plasmids in S. cerevisiae. Cell, 51, 463-471.
    • (1987) Cell , vol.51 , pp. 463-471
    • Brewer, B.J.1    Fangman, W.L.2
  • 37
    • 0023046695 scopus 로고
    • Both DNA topoisomerases I and II relax 2 micron plasmid DNA in living yeast cells
    • Saavedra,R.A. and Huberman,J.A. (1986) Both DNA topoisomerases I and II relax 2 micron plasmid DNA in living yeast cells. Cell, 45, 65-70.
    • (1986) Cell , vol.45 , pp. 65-70
    • Saavedra, R.A.1    Huberman, J.A.2
  • 39
    • 0025283653 scopus 로고
    • Evidence that replication initiates at only some of the potential origins in each oligomeric form of Bovine Papillomavirus Type 1 DNA
    • Schvartzman,J.B., Adolph,S., MartiÌn-Parras,L. and Schildkraut,C.L. (1990) Evidence that replication initiates at only some of the potential origins in each oligomeric form of Bovine Papillomavirus Type 1 DNA. Mol. Cell. Biol., 10, 3078-3086.
    • (1990) Mol. Cell. Biol. , vol.10 , pp. 3078-3086
    • Schvartzman, J.B.1    Adolph, S.2    MartiÌn-Parras, L.3    Schildkraut, C.L.4
  • 40
    • 0033551140 scopus 로고    scopus 로고
    • RNA polymerase switch in transcription of yeast rDNA: Role of transcription factor UAF (upstream activation factor) in silencing rDNA transcription by RNA polymerase II
    • Vu,L., Siddiqi,I., Lee,B.S., Josaitis,C.A. and Nomura,M. (1999) RNA polymerase switch in transcription of yeast rDNA: role of transcription factor UAF (upstream activation factor) in silencing rDNA transcription by RNA polymerase II. Proc. Natl Acad. Sci. USA, 96, 4390-4395.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 4390-4395
    • Vu, L.1    Siddiqi, I.2    Lee, B.S.3    Josaitis, C.A.4    Nomura, M.5
  • 41
    • 0033513543 scopus 로고    scopus 로고
    • Transcription factor UAF, expansion and contraction of ribosomal DNA (rDNA) repeats and RNA polymerase switch in transcription of yeast rDNA
    • Oakes,M., Siddiqi,I., Vu,L., Aris,J. and Nomura,M. (1999) Transcription factor UAF, expansion and contraction of ribosomal DNA (rDNA) repeats and RNA polymerase switch in transcription of yeast rDNA. Mol. Cell. Biol., 19, 8559-8569.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 8559-8569
    • Oakes, M.1    Siddiqi, I.2    Vu, L.3    Aris, J.4    Nomura, M.5
  • 42
    • 0036791653 scopus 로고    scopus 로고
    • Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus
    • Pasero,P., Bensimon,A. and Schwob,E. (2002) Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus. Genes Dev., 16, 2479-2484.
    • (2002) Genes Dev. , vol.16 , pp. 2479-2484
    • Pasero, P.1    Bensimon, A.2    Schwob, E.3
  • 43
    • 0034681257 scopus 로고    scopus 로고
    • The Saccharomyces Pif1p DNA helicase and the highly related Rrm3p have opposite effects on replication fork progression in ribosomal DNA
    • Ivessa,A.S., Zhou,J.Q. and Zakian,V.A. (2000) The Saccharomyces Pif1p DNA helicase and the highly related Rrm3p have opposite effects on replication fork progression in ribosomal DNA. Cell, 100, 479-489.
    • (2000) Cell , vol.100 , pp. 479-489
    • Ivessa, A.S.1    Zhou, J.Q.2    Zakian, V.A.3
  • 44
    • 0032915376 scopus 로고    scopus 로고
    • A genetic screen for ribosomal DNA silencing defects identifies multiple DNA replication and chromatin-modulating factors
    • Smith,J.S., Caputo,E. and Boeke,J.D. (1999) A genetic screen for ribosomal DNA silencing defects identifies multiple DNA replication and chromatin-modulating factors. Mol. Cell. Biol., 19, 3184-3197.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 3184-3197
    • Smith, J.S.1    Caputo, E.2    Boeke, J.D.3
  • 45
    • 0034231844 scopus 로고    scopus 로고
    • Werner's syndrome protein (WRN) migrates Holliday junctions and co-localizes with RPA upon replication arrest
    • Constantinou,A., Tarsounas,M., Karow,J.K., Brosh,R.M., Bohr,V.A., Hickson,I.D. and West,S.C. (2000) Werner's syndrome protein (WRN) migrates Holliday junctions and co-localizes with RPA upon replication arrest. EMBO Rep., 1, 80-84.
    • (2000) EMBO Rep. , vol.1 , pp. 80-84
    • Constantinou, A.1    Tarsounas, M.2    Karow, J.K.3    Brosh, R.M.4    Bohr, V.A.5    Hickson, I.D.6    West, S.C.7
  • 47
    • 0035880025 scopus 로고    scopus 로고
    • Unwinding the molecular basis of the Werner syndrome
    • Shen,J. and Loeb,L.A. (2001) Unwinding the molecular basis of the Werner syndrome. Mech. Ageing Dev., 122, 921-944.
    • (2001) Mech. Ageing Dev. , vol.122 , pp. 921-944
    • Shen, J.1    Loeb, L.A.2
  • 48
    • 0013907774 scopus 로고
    • Werner's syndrome a review of its symptomatology, natural history, pathologic features, genetics and relationship to the natural aging process
    • Epstein,C.J., Martin,G.M., Schultz,A.L. and Motulsky,A.G. (1966) Werner's syndrome a review of its symptomatology, natural history, pathologic features, genetics and relationship to the natural aging process. Medicine, 45, 177-221.
    • (1966) Medicine , vol.45 , pp. 177-221
    • Epstein, C.J.1    Martin, G.M.2    Schultz, A.L.3    Motulsky, A.G.4
  • 50
    • 0035799620 scopus 로고    scopus 로고
    • Diverged nuclear localization of Werner helicase in human and mouse cells
    • Suzuki,T., Shiratori,M., Furuichi,Y. and Matsumoto,T. (2001) Diverged nuclear localization of Werner helicase in human and mouse cells. Oncogene, 20, 2551-2558.
    • (2001) Oncogene , vol.20 , pp. 2551-2558
    • Suzuki, T.1    Shiratori, M.2    Furuichi, Y.3    Matsumoto, T.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.