Supercoiling, knotting and replication fork reversal in partially replicated plasmids

Nucleic Acids Research

Volumn 30, Issue 3, 2002, Pages 656-666

  Olavarrieta, L ^a   Martinez Robles M L ^a   Sogo, J M ^b   Stasiak, A ^c   Hernandez P ^a   Krimer, D B ^a   Schvartzman, J B ^a  

^a CENTRO DE INVESTIGACIONES BIOLÓGICAS   (Spain)

^b ETH ZURICH   (Switzerland)

^c UNIVERSITY OF LAUSANNE   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

CHLOROQUINE; ETHIDIUM BROMIDE; PLASMID VECTOR;

ABSORPTION; AGAR GEL ELECTROPHORESIS; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; DNA REPLICATION; DRUG EXPOSURE; ELECTRON MICROSCOPY; ELECTROPHORETIC MOBILITY; ESCHERICHIA COLI; GENE REPLICATION; GENETIC ANALYSIS; HOLLIDAY JUNCTION; ISOMER; MOLECULAR CLONING; MOLECULAR WEIGHT; NONHUMAN; PLASMID; PRIORITY JOURNAL; REVIEW; TWO DIMENSIONAL GEL ELECTROPHORESIS;

ESCHERICHIA COLI;

EID: 0036464531     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/30.3.656     Document Type: Review

References (48)

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3. Topological complexity of different populations of pBR322 as visualized by two-dimensional agarose gel electrophoresis
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5. Arrest of segregation leads to accumulation of highly intertwined catenated dimers: Dissection of the final stages of SV40 DNA replication
6. The localization of replication origins on ARS plasmids in S. cerevisiae
7. Analysis of replication intermediates by two-dimensional agarose gel electrophoresis
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9. Mechanisms for completing DNA replication
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12. The ColE1 unidirectional origin acts as a polar replication fork pausing site
13. Premature termination of DNA replication in plasmids carrying two inversely oriented ColE1 origins
14. Visualisation of plasmid replication intermediates containing reversed forks
15. Binding of proteins to nucleic acids
16. Increased production of a knotted form of plasmid pBR322 DNA in Escherichia coli DNA topoisomerase mutants
17. The presence of the region on pBR322 that encodes resistance to tetracycline is responsible for high levels of plasmid DNA knotting in Escherichia coli DNA topoisomerase I deletion mutant
18. Equilibrium, kinetic and footprinting studies of the Tus-Ter protein-DNA interaction
19. A computer model for the analysis of DNA replication intermediates by two-dimensional agarose gel electrophoresis
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21. Formation of knots in partially replicated DNA molecules
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23. Unidirectional replication as visualized by two-dimensional agarose gel electrophoresis
24. Escherichia coli SeqA protein affects DNA topology and inhibits open complex formation at oriC
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32. Unlinking of DNA by topoisomerases during DNA replication
33. The interaction of closed circular DNA with intercalative dyes
34. A model for replication repair in mammalian cells
35. RuvAB acts at arrested replication forks
36. Processing of recombination intermediates by the RuvABC proteins
37. Uptake of homologous single-stranded fragments by superhelical DNA: A possible mechanism for initiation of genetic recombination
38. Multiple mechanisms for initiation of ColE1 DNA replication DNA synthesis in the presence and absence of ribonuclease H
39. Mechanistic studies on the impact of transcription on sequence-specific termination of DNA replication and vice versa
40. The importance of repairing stalled replication forks
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42. Replication and recombination intersect
43. Replication fork arrest and DNA recombination
44. Modulation of RNA polymerase by (P)ppGpp reveals a RecG-dependent mechanism for replication fork progression
45. RuvABC-dependent double-strand breaks in dnaBts mutants require RecA
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47. RecA protein promotes the regression of stalled replication forks in vitro
48. Replication forks under torsional strain