A new class of transcription initiation factors, intermediate between TATA box-binding proteins (TBPs) and TBP-like factors (TLFs), is present in the marine unicellular organism, the dinoflagellate Crypthecodinium cohnii

Journal of Biological Chemistry

Volumn 277, Issue 43, 2002, Pages 40881-40886

  Guillebault, Delphine ^a,b   Sasorith, Souphatta ^a   Derelle, Evelyne ^a   Wurtz, Jean Marie ^c   Lozano, Jean Claude ^b   Bingham, Scott ^a   Tora, Laszlo ^b   Moreau, Hervé ^a,c  

^a France   (France)

^b INSTITUT DE GÉNÉTIQUE ET DE BIOLOGIE MOLÉCULAIRE ET CELLULAIRE   (France)

^c ARIZONA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; DNA; GENETIC ENGINEERING; HISTOLOGY;

TRANSCRIPTION INITIATION FACTORS;

PROTEINS;

PHENYLALANINE; TATA BINDING PROTEIN; TATA BINDING PROTEIN RELATED FACTOR; UNCLASSIFIED DRUG;

ARTICLE; BINDING AFFINITY; CRYPTHECODINIUM COHNII; DINOFLAGELLATE; EXPRESSED SEQUENCE TAG; NONHUMAN; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; TATA BOX; TRANSCRIPTION INITIATION;

ALGAE; CRYPTHECODINIUM; CRYPTHECODINIUM COHNII; DINOPHYCEAE; EUKARYOTA; PROTISTA;

EID: 0037174868     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M205624200     Document Type: Article

References (65)

1. Armstrong, J. A., and Emerson, B. M. (1998) Curr. Op. Genet. Dev. 8, 165-172
2. Cairns, B. R. (1998) Trends Biochem. Sci. 23, 20-25
3. Cox, J. M., Kays, A. R., Sanchez, J. F., and Schepartz, A. (1998) Curr. Biol. 2, 11-17
4. Gregory, P. D., and Hörz, W. (1998) Curr. Op. Cell Biol. 10, 339-345
5. Kadonaga, J. T. (1998) Cell 92, 307-313
6. McAdams, H. H., and Arkin, A. (2000) Curr. Biol. 10, R318-R320
7. Uhlmann, F. (2001) Curr. Biol. 11, R384-R387
8. Wolffe, A. P., and Hayes, J. J. (1999) Nucleic Acids Res. 27, 711-720
9. Workman, J. L., and Kingston, R. E. (1998) Annual Rev. Biochem. 67, 545-579
10. Wu, C. (1997) J. Biol. Chem. 272, 28171-28174
11. Berk, A. J. (1999) Curr. Op. Cell Biol. 11, 330-335
12. Buratowski, S. (2000) Curr. Op. Cell Biol. 12, 320-325
13. Klug, A. (2001) Science 292, 1844-1846
14. Ranish, J. A., and Hahn, S. (1996) Curr. Op. Genet. Dev. 6, 151-158
15. Johnson, K. M., Mitsouras, K., and Carey, M. (2001) Curr. Biol. 11, R510-R513
16. Bareket-Samish, A., Cohen, I., and Haran, T. E. (2000) J. Mol. Biol. 299, 965-977
17. Burley, S. K. (1996) Curr. Op. Struct. Biol. 6, 69-75
18. Rowlands, T., Bauman, P., and Jackson, S. P. (1994) Science 264, 1326-1329
19. Dantonel, J. C., Wurtz, J. M., Poch, O., Moras, D., and Tora, L. (1999) Trends Biochem. Sci. 24, 335-339
20. Berk, A. J. (2000) Cell 103, 5-8
21. Pugh, B. F., and Tjian, R. (1991) Genes Dev. 5, 1935-1945
22. Patikoglou, G. A., Kim, J. L., Sun, L., Yang, S.-H., Kodadek, T., and Burley, S. K. (1999) Genes Dev. 13, 3217-3230
23. Wong, J. M., Liu, F., and Bateman, E. (1992) Nucleic Acids Res. 20, 4817-4824
24. Huang, W., and Bateman, E. (1995) J. Biol. Chem. 270, 28839-28847
25. Cohen, S. M., Knecht, D., Lodish, H. F., and Loomis, W. F. (1986) EMBO J. 5, 3361-3366
26. Kimmel, A. R., and Firtel, R. A. (1983) Nucleic Acids Res. 11, 541-552
27. Liston, D. R., and Johnson, P. J. (1999) Mol. Cell. Biol. 19, 2380-2388
28. McAndrew, M. B., Read, M., Sims, P. F. G., and Hyde, J. E. (1993) Gene 124, 165-171
29. Luo, H., Gilinger, G., Mukherjee, D., and Bellofatto, V. (1999) J. Biol. Chem. 274, 31947-31954
30. Quon, D. V. K., Delgadillo, M. G., and Johnson, P. J. (1996) J. Mol. Evol. 43, 253-262
31. Quon, D. V. K., Delgadillo, M. G., Khachi, A., Smale, S. T., and Johnson, P. J. (1994) Proc. Natl. Acad. Sci. U. S. A. 91, 4579-4583
32. Soyer-Gobillard, M. O., and Moreau, H. (2000) Encyclopedia of Microbiology, pp. 42-54, Academic Press, Orlando, FL
33. Raikov, I. B. (1995) Acta Protozool. 34, 239-247
34. Spector, D. L. (1984) Dinoflagellates, pp. 1-15, Academic Press, Orlando, FL
35. Herzog, M., and Soyer, M. O. (1981) Eur. J. Cell Biol. 23, 295-302
36. Herzog, M., De Marcillac, G. D., and Soyer, M. O. (1982) Eur. J. Cell Biol. 27, 151-155
37. Bhaud, Y., Guillebault, D., Lennon, J. F., Defacque, H., Soyer-Gobillard, M. O., and Moreau, H. (2000) J. Cell Sci. 113, 1231-1239
38. Le, Q. H., Markovic, P., Hastings, J. W., Jovine, R. V. M., and Morse, D. (1997) Mol. Gen. Genet. 255, 595-604
39. Li, L., and Hastings, J. W. (1998) Plant Mol. Biol. 36, 275-284
40. Guillebault, D., Derelle, E., Bhaud, Y., and Moreau, H. (2001) Protist 152, 127-138
41. Moore, P. A., Ozer, J., Salunek, M., Jan, G., Zerby, D., Campbell, S., and Lieberman, P. M. (1999) Mol. Cell. Biol. 19, 7610-7620
42. Plewniak, F., Thompson, J. D., and Poch, O. (2000) Bioinformatics 16, 750-759
43. Thompson, J. D., Gibson, T. F., Plewniak, K., Jeanmougin, F., and Higgins, D. G. (1997) Nucleic Acids Res. 25, 4876-4882
44. Barton, G. J. (1993) Protein Eng. 6, 37-40
45. Galtier, N., Gouy, M., and Gautier, C. (1996) Comput. Appl. Biosci. 12, 543-548
46. Ausseil, J., Soyer-Gobillard, M. O., Géraud, M.-L., Bhaud, Y., Baines, I., Preston, T., and Moreau, H. (2000) Protist 150, 197-211
47. Brou, C., Chaudray, S., Davidson, I., Lutz, Y., Wu, J., Egly, J. M., Tora, L., and Chambon, P. (1993) EMBO J. 12, 489-499
48. Lescure, A., Lutz, Y., Eberhard, D., Jacq, X., Krom, A., Grummt, I., Davidson, I., Chambon, P., and Tora, L. (1994) EMBO J. 13, 1166-1175
49. Nikolov, D. B., Chen, H., Halay, E. D., Hoffman, A., Roeder, R. G., and Burley, S. K. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 4862-4867
50. Geiger, J. H., Hahn, S., Lee, S., and Sigler, P. B. (1996) Sciences 272, 830-836
51. Nikolov, D. B., Chen, H., Halay, E. D., Usheva, A. A., Hisatake, K., Lee, D. K., Roeder, R. G., and Burley, S. K. (1995) Nature 377, 119-128
52. Sali, A., and Blundell, T. L. (1993) J. Mol. Biol. 234, 779-815
53. Rost, B., Sander, C., and Schneider, R. (1994) Comput. Appl. Appl. Biosci. 10, 53-60
54. O'Brien, R., DeDecker, B., Fleming, K. G., Sigler, P. B., and Ladbury, J. E. (1998) J. Mol. Biol. 279, 117-125
55. Rizzo, P. J. (1991) J. Protozool. 38, 246-252
56. Rizzo, P. J. (1979) J. Protozool. 26, 290-294
57. Sigee, D. C. (1984) Biosystem 16, 203-210
58. Bhaud, Y., Géraud, M. L., Ausseil, J., Soyer-Gobillard, M. O., and Moreau, H. (1998) J. Euk. Microbiol. 46, 259-267
59. Rabenstein, M. D., Zhou, S., Lis, J. T., and Tijian, R. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 4791-4796
60. Ohbayashi, T, Makino, Y., and Tamura, T. (1999) Nucleic Acids Res. 27, 750-755
61. Dantonel, J.-C., Quintin, S., Lakatos, L., Labouesse, M., and Tora, L. (2000) Mol. Cell 6, 715-722
62. Holmes, M. C., and Tjian, R. (2000) Science 288, 867-870
63. Kaltenbach, L., Horner, M. A., Rothman, J. H., and Mango, S. E. (2000) Mol. Cell 6, 705-713
64. Veenstra, G. J. C., Weeks, D. L., and Wolffe, A. P. (2000) Science 290, 2312-2315
65. Müller, F., Lakatos, L., Dantonel, J.-C., Strähle, U., and Tora, L. (2001) Curr. Biol. 11, 282-287