Fungal peroxidases: Molecular aspects and applications

Journal of Biotechnology

Volumn 93, Issue 2, 2002, Pages 143-158

  Conesa, Ana ^a   Punt, Peter J ^a   Van Den Hondel, Cees A M J J ^a  

^a TNO   (Netherlands)

Author keywords

Chloroperoxidase; Fungal peroxidases; Haem; Heterologous protein production; Molecular genetics; Protein homology; Protein structure; Structure function relationship; White rot

Indexed keywords

BIOTECHNOLOGY; CATALYSIS; ENZYMES; HYDROGEN PEROXIDE; OXIDATION;

MOLECULAR GENETICS;

FUNGI;

CHLORIDE PEROXIDASE; CYTOCHROME C PEROXIDASE; HORSERADISH PEROXIDASE; LIGNIN; MANGANESE PEROXIDASE; PEROXIDASE;

AEROBIC METABOLISM; ARTICLE; BASIDIOMYCETES; ENZYME ACTIVE SITE; ENZYME MECHANISM; ENZYME STRUCTURE; ENZYME SYNTHESIS; FUNGUS; GENETIC ORGANIZATION; MOLECULAR GENETICS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHANEROCHAETE; PRIORITY JOURNAL; PROTEIN EXPRESSION; SEQUENCE HOMOLOGY; SPECIES DIFFERENCE;

AMINO ACID SEQUENCE; BINDING SITES; BIOTECHNOLOGY; CATALYSIS; FUNGI; MOLECULAR SEQUENCE DATA; PEROXIDASES; RECOMBINANT PROTEINS; SEQUENCE HOMOLOGY; SUBSTRATE SPECIFICITY;

EID: 0037074721     PISSN: 01681656     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-1656(01)00394-7     Document Type: Article

References (120)

1. Heterologous expression of lignin peroxidase of Phanerochaete chrysosporium in Aspergillus niger
2. Structures of genomic and complementary DNAs coding for Pleurotus ostreatus manganese(II) peroxidase
3. Fructose induces and glucose represses chloroperoxidase mRNA levels
4. Structural properties of peroxidases
5. Proton NMR investigation into the basis for the relative high redox potential of lignin peroxidases
6. Mechanisms white rot fungi use to degrade pollutants
7. Fungi in lignocellulose breakdown and biopulping
8. Twenty-five coregulated transcripts define a sterigmatocystin gene cluster in Aspergillus nidulans
9. Manganese peroxidase gene transcription in phanerochaete chrysosporium: Activation by manganese
10. Heat shock induction of manganese peroxidasw gene transcription in Phanerochaete chrysosporium
11. Purification and properties of a non-haem chloroperoxidase from Serratia marcescens
12. Vanadium peroxidases
13. Description of a versatile peroxidase involved in the natural degradation of lignin that has both manganese peroxidase and lignin peroxidase substrate interaction sites
14. The cloning of a new peroxidase found in lignocellulose cultures of Pleurotus eryngii and sequence comparison with other fungal peroxidases
15. Directed evolution of a fungal peroxidase
16. The crystal structure of lignin peroxidase at 1.70 A resolution reveals a hydroxy group on the cbeta of tryptophan 171: A novel radical site formed during the redox cycle
17. Cloning and characterisation of a cDNA encoding a novel extracellular peroxidase from Trametes versicolor
18. Studies on the production of fungal peroxidases in Aspergillus niger
19. Expression of the Caldariomyces fumago chloroperoxidase in Aspergillus niger and characterisation of the recombinant enzyme
20. Recent advances on the molecular genetics of ligninolytic fungi
21. Heterologous expression and characterization of soybean cytosolic ascorbate peroxidase
22. Two substrate interaction sites in lignin peroxidase revealed by site-directed mutagenesis
23. 2+ and haem
24. Catalytic structure-function realtionships in heme peroxidases
25. Biotechnology and microbiology of coal degradation
26. Oxidation-reduction properties of compounds I and II of Arthromyces ramosus peroxidase
27. Decolorization of Kraft effluent by free and immobilized lignin peroxidases and horseradish peroxidase
28. Screening for ligninolytic fungi applicable to the biodegradation of xenobiotics
29. Reverse transcription-PCR analysis of the regulation of the manganese peroxidase gene family
30. Mn(II) oxidation is the principal function of the extracellular Mn-peroxidase from Phanerochaete chrysosporium
31. Purification and characterization of an extracellular Mn(II)-dependent peroxidase from the lignin-degrading basidiomycete, Phanerochaete chrysosporium
32. Molecular biology of the lignin-degrading basidiomycete Phanerochaete chrysosporium
33. Oxidation of polycyclic aromatic hydrocarbons and dibenzo[p]-dioxins by Phanerochaete chrysosporium ligninase
34. Veratryl alcohol as a mediator and the role of radical cations in lignin biodegradation by Phanerochaete chrysosporium
35. Degradation of xenobiotics by white rot fungi
36. A comparative study of the inactivation of wild-type, recombinant and two mutant horseradish peroxidase isoenzymes C by hydrogen peroxide and m-chloroperoxybenzoic acid
37. Modelling of the lignin peroxidase LIII of Phlebia radiata: Use of a sequence template generated from a 3-D structure
38. Pulp-bleaching with dimethyldioxirane and lignin-oxidizing enzymes
39. A cluster of genes encoding major isozymes of lignin peroxidase and manganese peroxidase from the white-rot fungus Trametes versicolor
40. Heterologous expression and characterization of an active lignin peroxidase from Phanerochaete chrysosporium using recombinant baculovirus
41. Production and characterization of recombinant lignin peroxidase isozyme H2 from Phanerochaete chrysosporium using recombinant baculovirus
42. Increasing ligninolytic enzyme activities in several white-rot basidiomycetes by nitrogen-sufficient media
43. Post-translational modifications of Chloroperoxidase from Caldariomyces fumago
44. Comparison of lignin peroxidase, horseradish peroxidase and laccase in the oxidation of methoxybenzenes
45. Stabilization of the veratryl alcohol cation radical by lignin peroxidase
46. Screening of basidiomycetes for lignin peroxidase genes using a DNA probe
47. Characterization of manganese(II) binding site mutants of manganese peroxidase
48. Comparison of structure and activities of peroxidases from Coprinus cinereus, Coprinus macrorhizus and Arthromyces ramosus
49. Bleaching of hardwood Kraft pulp with manganese-peroxidase secreted from Phanerochaete sordida YK-624
50. Degradation of polychlorinated biphenyl mixtures by the lignin-degrading fungus Phanerochaete crhysosporium
51. Crystal structure of the fungal peroxidase from Arthromyces ramosus at 1.9 A resolution. Structural comparisons with the lignin and cytochrome c peroxidases
52. Regulation of manganese peroxidase gene transcription by hydrogen peroxide, chemical stress, and molecular oxygen
53. Heterologous expression of a thermostable manganese peroxidases from Dichomitus squalens in Phanerochaete chrysosporium
54. Disulfide bonds and glycosylation in fungal peroxidases
55. Cloning and molecular analysis of a cDNA and the Cs-mnp1 gene encoding a manganese peroxidase isoenzyme from the lignin-degrading basidiomycete Ceriporiopsis subvermispora
56. Oxidation-reduction potential measurements on chloroperoxidase and its complexes
57. Spectroscopic and kinetic properties of the oxidized intermediates of lignin peroxidase from Phanerochaete chrysosporium
58. Homologous expression of recombinant manganese peroxidase in Phanerochaete chrysosporium
59. Characterization of a novel manganese peroxidase-lignin peroxidase hybrid isozyme produced by Bjerkandera species strain BOS55 in the absence of manganese
60. Nutrient regulation of extracellular peroxidases in the white rot fungus, Bjerkandera sp strain BOS55
61. Oxidation-reduction potentials and ionization states of extracellular peroxidases from the lignin-degrading fungus Phanerochaete chrysosporium
62. Chloroperoxidase. Isolation and propierties of the crystalline glycoprotein
63. Relative stability of recombinant versus native peroxidases from Phanerochaete chrysosporium
64. Oxidative bleaching enzymes: A review
65. Heterologous expression of active manganese peroxidase from Phanerochaete chrysosporium using the baculovirus expression system
66. Screening of 68 species of basidiomycetes for enzymes involved in lignin degradation
67. Cloning of a second non-haem bromoperoxidase gene from Streptomyces aureofaciens ATCC 10762: Sequence analysis, expression in Streptomyces lividans and enzyme purification
68. Isoenzymes of chloroperoxidase from Caldariomyces fumago
69. Crystallographic refinement of lignin peroxidase at 2 A
70. Physiology and molecular biology of the lignin peroxidases of Phanerochaete chrysosporium
71. Lignin peroxidase from the basidiomycete Phanerochaete chrysosporium is synthesized as a preproenzyme
72. Isolation and characterisation of a novel non-haem extracellular peroxidase produced by the thermophilic actinomycete Thermonospora fusca BD25
73. Heterologous expression of Pleurotus eryngii peroxidase confirms its ability to oxidize Mn(2+) and different aromatic substrates
74. Molecular characterization of a novel peroxidase isolated from the ligninolytic fungus Pleurotus eryngii
75. Heterologous production of a ligninolytic enzyme: Expression of the Phlebia radiata laccase gene in Trichoderma reesei
76. A lignin peroxidase-encoding cDNA from the white fungus Phlebia radiata: Caracterization and expression in Trichoderma reesei
77. Cloning, sequencing, and heterologous expression of a gene coding for Arthromyces ramosus peroxidase
78. Do carbohydrates play a role in the lignin peroxidase cycle? Redox catalysis in the endergonic region of the driving force
79. Expression of chloroperoxidase for site-specific mutagenesis
80. X-ray absorption spectroscopy comparison of the active site structures of Phanerochaete chrysosporium lignin peroxidase isoenzymes H2, H3, H4, H5, H8, and H10
81. Substrate binding and catalysis in heme peroxidases
82. Homologous expression of recombinant lignin peroxidase in Phanerochaete chrysosporium
83. Efficient expression of a Phanerochaete chrysosporium manganese peroxidase gene in Aspergillus oryzae
84. The crystal structure of manganese peroxidase from Phanerochaete chrysosporium at 2.06 A resolution
85. Preliminary crystallographic analysis of manganese peroxidase from Phanerochaete chrysosporium
86. The crystal structure of chloroperoxidase: A heme peroxidase-cytochrome P450 functional hybrid
87. Crystal structures of substrate binding site mutants of manganese peroxidase
88. The effects of calcium on the thermal stability and activity of manganese peroxidase
89. Biodegradation of crosslinked acrylic polymers by a white-rot fungus
90. Adapting protein solubility by glycosylation. N-glycosylation mutants of Coprinus cinereus peroxidase in salt and organic solutions
91. Characterization of three new manganese peroxidase genes from the ligninolytic basidiomycete Ceriporiopsis subvermispora
92. Lignin peroxidase of Phanerochaete chrysosporium
93. Addition of veratryl alcohol oxidase activity to manganese peroxidase by site-directed mutagenesis
94. Oxidation of monomethoxylated aromatic compounds by lignin peroxidase: Role of veratryl alcohol in lignin biodegradation
95. Production of extracellular proteins by the filamentous fungus Aspergillus
96. Selective oxidations catalyzed by peroxidases
97. Suthern blot screening for lignin peroxidase and ary-alcohol oxidase genes in 30 fungal species
98. A cytochrome c variant resistant to heme degradation by hydrogen peroxide
99. Vanadium chloroperoxidases occur widely in nature
100. Reactions of lignin peroxidase compounds I and II with veratryl alcohol. Transient-state kinetic characterization
101. Structure and evolution of peroxidases
102. Structure of plant and fungal peroxidases
103. Heterologous expression and reconstitution of fungal Mn peroxidase
104. Expression of fungal Mn peroxidase in E. coli and refolding to yield active enzyme
105. 2+ by both compound I and compound II
106. Chloroperoxidase-encoding gene from Pseudomonas pyrrocinia: Sequence, expression in heterologous hosts, and purification of the enzyme
107. Construction and characterization of a manganese-binding site in cytochrome c peroxidase: Towards a novel manganese peroxidase
108. Replacement of the proximal heme thiolate ligand in chloroperoxidase with a histidine residue
109. Disordered ultrastructure in lignin-peroxidase-secreting hyphae of the white-rot fungus Phanerochaete chrysosporium
110. Effect of polydimethylsiloxane oxygen carriers on the biological bleaching of hardwood kraft pulp by Trametes versicolor
111. High-pressure-assisted reconstitution of recombinant chloroperoxidase