Cloning and characterization of a cDNA encoding a novel extracellular peroxidase from Trametes versicolor

Applied and Environmental Microbiology

Volumn 65, Issue 3, 1999, Pages 1343-1347

  Collins, Patrick J ^a   O'Brien, Margaret M ^a   Dobson, Alan D W ^a  

^a UNIVERSITY COLLEGE CORK   (Ireland)

Author keywords

[No Author keywords available]

Indexed keywords

AMMONIUM SULFATE; CARBON; COMPLEMENTARY DNA; GLUCOSE; LIGNIN; LIGNIN PEROXIDASE; MANGANESE; MANGANESE PEROXIDASE; MANGANESE SULFATE; NITROGEN; PEROXIDASE;

ARTICLE; BASIDIOMYCETES; ENZYME ISOLATION; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PROTEIN EXPRESSION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS; TRAMETES VERSICOLOR; TRANSCRIPTION REGULATION;

TRAMETES VERSICOLOR;

EID: 0032984977     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.65.3.1343-1347.1999     Document Type: Article

References (41)

1. Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
2. Archibald, F. S. 1993. Lignin peroxidase activity is not important in biological bleaching and delignification of unbleached kraft pulp by Trametes versicolor. Appl. Environ. Microbiol. 58:3101-3109.
3. Asada, Y., Y. Kimura, T. Oka, and M. Kuwahara. 1992. Characterization of a cDNA and gene encoding a lignin peroxidase from the lignin-degrading basidiomycete Bjerkandera adusta, p. 421-426. In M. Kuwahara and M. Shimada (ed.), Biotechnology in the pulp and paper industry. Uni Publishers, Tokyo, Japan.
4. Asada, Y., A. Watanabe, T. Irie, T. Nakayama, and M. Kuwahara. 1995. Structures of genomic and complementary DNAs coding for Pleurotus ostreatus manganese (II) peroxidase. Biochim. Biophys. Acta. 1251:205-209.
5. Brown, J. A., M. Alic, and M. H. Gold. 1991. Manganese peroxidase gene transcription in Phanerochaete chrysosporium: activation bv manganese. J. Bacteriol. 173:4101-4106.
6. Brown, J. A., D. Li, M. Alic, and M. H. Gold. 1993. Heat shock induction of manganese peroxidase gene transcription in Phanerochaete chrysosporium. Appl. Environ. Microbiol. 59:4295-4299.
7. Collins, P. J., and A. D. W. Dobson. 1997. Regulation of laccase gene transcription in Trametes versicolor. Appl. Environ. Microbiol. 63:3444-3450.
8. Collins, P. J., J. A. Field, P. Teunissen, and A. D. W. Dobson. 1997. Stabilization of lignin peroxidases in white-rot fungi by tryptophan. Appl. Environ. Microbiol. 63:2543-2548.
9. Cullen, D. 1997. Recent advances on the molecular genetics of ligninolytic fungi. J. Biotechnol. 53:273-289.
10. Eriksson, K.-E., L., R. A. Blanchette, and P. Ander. 1990. Biochemistry of lignin degradation, p. 225-333. In K.-E. L. Eriksson, R. A. Blanchette, and P. Ander (ed.), Microbial and enzymatic degradation of wood and wood components. Springer-Verlag, Berlin, Germany.
11. Finzel, B. C., T. L. Poulos, and J. Kraut. 1987. Crystal structure of yeast cytochrome c peroxidase refined at 1.7 A resolution. J. Biol. Chem. 259: 13027-13036.
12. Gettemy, J. M., D. Li, M. Alic, and M. H. Gold. 1997. Truncated gene reporter system for studying the regulation of manganese peroxidase expression. Curr. Genet. 3:519-524.
13. Gettemy, J. M., B. Ma, M. Alic, and M. H. Gold. 1998. Reverse transcription-PCR analysis of the regulation of the manganese peroxidase gene family. Appl. Environ. Microhiol. 64:569-574.
14. Glenn, J. K., L. Akileswaren, and M. H. Gold. 1986. Mn(II) oxidation is the principal function of the extracellular Mn-peroxidase from Phanerochaete chrysosporium. Arch. Biochem. Biophys. 251:688-696.
15. Gold, M. H., and M. Alic. 1993. Molecular biology of the lignin-degrading basidiomycete Phanerochaete chrysosporium. Microbiol. Rev. 57:605-622.
16. Johansson, T., and P. O. Nyman. 1993. Isozymes of lignin peroxidase and manganese (II) peroxidase from the white-rot basidiomycete Trametes versicolor. I. Isolation of enzyme forms and characterization of physical and catalytic properties. Arch. Biochem. Biophys. 300:49-56.
17. Johansson, T., and P. O. Nyman. 1996. A cluster of genes encoding major isozymes of lignin peroxidase and manganese peroxidase from the white-rot fungus Trametes versicolor. Gene 170:31-38.
18. Johansson, T., K. G. Welinder, and P. O. Nyman. 1993. Isozymes of lignin peroxidase and manganese (II) peroxidase from the white-rot basidiomycete Trametes versicolor. II. Partial sequences, peptide maps and amino acid and carbohydrate compositions. Arch. Biochem. Biophys. 300:57-62.
19. 2+ binding site of manganese peroxidase from homology modelling, p. 31-34. In K. G. Welinder, S. K. Rasmussen, C. Penel, and H. Greppin (ed.), Plant peroxidases: biochemistry and physiology. University of Copenhagen and Unversity of Geneva, Geneva, Switzerland.
20. Jönsson, L., H. G. Becker, and P. O. Nyman. 1994. A novel type of peroxidase gene from the white-rot fungus Trametes versicolor. Biochim. Biophys. Acta 1207:255-259.
21. Jönsson, L., and P. O. Nyman. 1992. Characterization of lignin peroxidase gene from the white-rot fungus Trametes versicolor. Biochemie 74:177-183.
22. Jönsson, L., and P. O. Nyman. 1994. Tandem lignin peroxidase genes of the white-rot fungus Trametes versicolor. Biochim. Biophys. Acta 1218:408-412.
23. Kaal, E. E. J., J. A. Field, and T. W. Joyce. 1995. Increasing ligninolytic enzyme activities in several white-rot basidiomycetes by nitrogen-sufficient media. Bioresour. Technol. 53:133-139.
24. Kersten, P. J., M. Tien, B. Kalyanamaran, and T. K. Kirk. 1985. the ligninase of Phanerochaete chrysosporium generates cation radicals from methoxybenzenes. J. Biol. Chem. 260:2609-2612.
25. Kishi, K., M. Kusters-van Someren, M. B. Mayfield, J. Sun, T. M. Loehr, and M. H. Gold. 1996. Characterization of manganese (II) binding site mutants of manganese peroxidase. Biochemistry 35:8986-8994.
26. Li, D., M. Alic, J. A. Brown, and M. H. Gold. 1995. Regulation of manganese peroxidase gene transcription by hydrogen peroxide, chemical stress, and molecular oxygen. Appl. Environ. Microbiol. 61:341-345.
27. Limongi, P., M. Kjalke, J. Vend, J. W. Tams, T. Johansson, and K. G. Welinder. 1995. Disulphide bonds and glycosylation in fungal peroxidases. Eur. J. Biochem. 227:270-276.
28. Lobos, S., L. Lorondo, L. Salas, E. Karahanian, and R. Vicuna. 1998. Cloning and molecular analysis of a cDNA encoding a manganese peroxidase isozyme from the lignin degrading basidiomycete Ceriporiopsis subvermispora. Gene 206:185-193.
29. Mester, T., M. Peña, and J. A. Field. 1996. Nutrient regulation of extracellular peroxidases in the white-rot fungus Bjerkandera sp. strain BOS55. Appl. Microbiol. Biotechnol. 44:778-784.
30. Mester, T., and J. A. Field. 1988. Characterization of a novel manganese peroxidase-lignin peroxidase hybrid isozyme produced by Bjerkandera sp. strain BOS55 in the absence of manganese. J. Biol. Chem. 273:15412-15417.
31. Moreira, M. T., G. Feijoo, R. Sierra-Alvarez, J. Lema, and J. A. Field. 1997. Manganese is not required for biobleaching of oxygen-delignified kraft pulp by the white rot fungus Bjerkandera sp. strain BOS55. Appl. Environ. Microbiol. 63:1749-1755.
32. Pease, E. A., and M. Tien. 1992. Heterogeneity and regulation of manganese peroxidases from Phanerochaete chrysosporium. J. Bacteriol. 174:3532-3540.
33. Poulos, T. L., S. Edwards, H. Wariishi, and M. H. Gold. 1993. Crystallographic refinement of lignin peroxidase at 2A. J. Biol. Chem. 268:4429-1440.
34. Pribnow, D., M. B. Mayfield, V. J. Nipper, J. A. Brown, and M. H. Gold. 1989. Characterization of a cDNA encoding manganese peroxidase from the lignin-degrading basidiomycete Phanerochaete chrysosporium. J. Biol. Chem. 264:5036-5040.
35. Reiser, J., I. S. Walther, C. Fraefel, and A. Fiecther. 1993. Methods to investigate the expression of lignin peroxidase genes by the while rot fungus Phanerochaete chrysosporium. Appl. Environ. Microbiol. 59:2897-2903.
36. Saloheimo, M., V. Barajas, M.-L. Niko-Paavola, and J. K. C. Knowles. 1989. A lignin-peroxidase encoding cDNA from the white-rot fungus Phlebia radiata: characterization and expression in Trichoderma reesei. Gene 85:343-351.
37. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
38. Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5467.
39. Sundaramoorthy, M., K. Kishi, M. H. Gold, and T. L. Poulos. 1994. The crystal structure of manganese peroxidase from Phanerochaete chrysosporium at 2.06-A resolution. J. Biol. Chem. 269:32759-32767.
40. Welinder, K. G. 1992. Superfamily of plant, fungal and bacterial peroxidases. Curr. Opin. Struct. Biol. 2:383-393.
41. Welinder, K. G., and M. Gajhede. 1993. Structure and evolution of peroxidases, p. 35-42. In K. G. Welinder, S. K. Rasmussen, C. Penel, and H. Greppin (ed.), Plant peroxidases: biochemistry and physiology. University of Copenhagen and University of Geneva, Geneva, Switzerland.