cDNA microarrays detect activation of a myogenic transcription program by the PAX3-FKHR fusion oncogene

Proceedings of the National Academy of Sciences of the United States of America

Volumn 96, Issue 23, 1999, Pages 13264-13269

  Khan, Javed ^a   Bittner, Michael L ^a   Saal, Lao H ^a   Teichmann, Ulrike ^a   Azorsa, David O ^a   Gooden, Gerald C ^a   Pavan, William J ^a   Trent, Jeffrey M ^a   Meltzer, Paul S ^a  

^a NATIONAL HUMAN GENOME RESEARCH INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; HYBRID PROTEIN; MYOGENIN; SOMATOMEDIN B; SOMATOMEDIN BINDING PROTEIN 5; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR FKHR; TRANSCRIPTION FACTOR PAX 3; UNCLASSIFIED DRUG;

ANIMAL CELL; ARTICLE; CARCINOGENESIS; CELL ONCOGENE; CELL STRAIN 3T3; CONTROLLED STUDY; EXPERIMENTAL MODEL; GENE ACTIVATION; GENE EXPRESSION; MUSCLE DEVELOPMENT; NONHUMAN; PRIORITY JOURNAL; PROTEIN INDUCTION; RHABDOMYOSARCOMA; TRANSCRIPTION REGULATION; VALIDATION PROCESS;

3T3 CELLS; ANIMALS; ARTIFICIAL GENE FUSION; DNA, COMPLEMENTARY; DNA-BINDING PROTEINS; FORKHEAD TRANSCRIPTION FACTORS; MICE; MYOD PROTEIN; MYOGENIN; PAIRED BOX TRANSCRIPTION FACTORS; RHABDOMYOSARCOMA, ALVEOLAR; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC; TRANSDUCTION, GENETIC; TUMOR CELLS, CULTURED;

ANIMALIA; GASTROPODA; MURINAE;

EID: 0033539498     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.96.23.13264     Document Type: Article

References (42)

1. Barr, F. G. (1998) Nat. Genet. 19, 121-124.
2. Galili, N., Davis, R. J., Fredericks, W. J., Mukhopadhyay, S., Rauscher, F. J., III, Emanuel, B. S., Rovera, G. & Barr, F. G. (1993) Nat. Genet. 5, 230-235.
3. Shapiro, D. N., Sublett, J. E., Li, B., Downing, J. R. & Naeve, C. W. (1993) Cancer Res. 53, 5108-5112.
4. Fredericks, W. J., Galili, N., Mukhopadhyay, S., Rovera, G., Bennicelli, J., Barr, F. G. & Rauscher, F. J., III (1995) Mol. Cell. Biol. 15, 1522-1535.
5. Bennicelli, J. L., Fredericks, W. J., Wilson, R. B., Rauscher, F. J., III & Barr, F. G. (1995) Oncogene 11, 119-130.
6. Boher, E., Franz, T., Arnold, H. H., Gruss, P. & Tremblay, P. (1994) Development (Cambridge, U.K.) 120, 603-612.
7. Bennicelli, J. L., Edwards, R. H. & Barr, F. G. (1996) Proc. Natl. Acad. Sci. USA 93, 5455-5459.
8. Davis, R. J. & Barr, F. G. (1997) Proc. Natl. Acad. Sci. USA 94, 8047-8051.
9. Barr, F. G., Nauta, L. E., Davis, R. J., Schafer, B. W., Nycum, L. M. & Biegel, J. A. (1996) Hum. Mol. Genet. 5, 15-21.
10. Epstein, J. A., Lam, P., Jepeal, L., Maas, R. L. & Shapiro, D. N. (1995) J. Biol. Chem. 270, 11719-11722.
11. Scheidler, S., Fredericks, W. J., Rauscher, F. J., III, Barr, F. G. & Vogt, P. K. (1996) Proc. Natl. Acad. Sci. USA 93, 9805-9809.
12. Lam, P. Y., Sublett, J. E., Hollenbach, A. D. & Roussel, M. F. (1999) Mol. Cell. Biol. 19, 594-601.
13. Miller, A. D. & Rosman, G. J. (1989) BioTechniques 7, 980-2, 984-6, 989-990.
14. Pear, W. S., Nolan, G. P., Scott, M. L. & Baltimore, D. (1993) Proc. Natl. Acad. Sci. USA 90, 8392-8396.
15. Khan, J., Simon, R., Bittner, M., Chen, Y., Leighton, S. B., Pohida, T., Smith, P. D., Jiang, Y., Gooden, G. C., Trent, J. M. & Meltzer, P. S. (1998) Cancer Res. 58, 5009-5013.
16. DeRisi, J., Penland, L., Brown, P. O., Bittner, M. L., Meltzer, P. S., Ray, M., Chen, Y., Su, Y. A. & Trent, J. M. (1996) Nat. Genet. 14, 457-460.
17. Shalon, D., Smith, S. J. & Brown, P. O. (1996) Genome Res. 6, 639-645.
18. Khan, J., Saal, L. H., Bittner, M. L., Chen, Y., Trent, J. M. & Meltzer, P. S. (1999) Electrophoresis 20, 223-229.
19. Chen, Y., Dougherty, E. R. & Bittner, M. L. (1997) Biomed. Optics. 2, 364-374.
20. Graham, D. K., Bowman, G. W., Dawson, T. L., Stanford, W. L., Earp, H. S. & Snodgrass. H. R. (1995) Oncogene 10, 2349-2359.
21. Epstein, J. A., Shapiro, D. N., Cheng, J., Lam, P. Y. & Maas, R. L. (1996) Proc. Natl. Acad. Sci. USA 93, 4213-4218.
22. Boucher, C. A., Carey, N., Edwards, Y. H., Siciliano, M. J. & Johnson, K. J. (1996) Genomics 33, 140-142.
23. Clark, J., Rocques, P. J., Braun, T., Bober, E., Arnold, H. H., Fisher, C., Fletcher, C., Brown, K., Gusterson, B. A., Carter, R. L., et al. (1991) Br. J. Cancer 64, 1039-1042.
24. El-Badry, O. M., Minniti, C., Kohn, E. C., Houghton, P. J., Daughaday, W. H. & Helman, L. J. (1990) Cell Growth Differ. 1, 325-331.
25. Strohman, R. C., Micou-Eastwood, J., Glass, C. A. & Matsuda, R. (1983) Science 221, 955-957.
26. Oliver, G., Wehr, R., Jenkins, N. A., Copeland, N. G., Cheyette, B. N., Hartenstein, V., Zipursky, S. L. & Gruss, P. (1995) Development (Cambridge, U.K.) 121, 693-705.
27. Spitz, F., Demignon, J., Porteu, A., Kahn, A., Concordet, J. P., Daegelen, D. & Maire, P. (1998) Proc. Natl. Acad. Sci. USA 95, 14220-14225.
28. Ford, H. L., Kabingu, E. N., Bump, E. A., Mutter, G. L. & Pardee, A. B. (1998) Proc. Natl. Acad. Sci. USA 95, 12608-12613.
29. Nieto, M. A., Sargent, M. G., Wilkinson, D. G. & Cooke, J. (1994) Science 264, 835-839.
30. Cohen, M. E., Yin, M., Paznekas, W. A., Schertzer, M., Wood, S. & Jabs, E. W. (1998) Genomics 51, 468-471.
31. Buxton, P. G., Kostakopoulou, K., Brickell, P., Thorogood, P. & Ferretti, P. (1997) Int. J. Dev. Biol. 41, 559-568.
32. Green, B. N., Jones, S. B., Streck, R. D., Wood, T. L., Rotwein, P. & Pintar, J. E. (1994) Endocrinology 134, 954-962.
33. Rotwein, P., James, P. L. & Kou, K. (1995) Mol. Endocrinol. 9, 913-923.
34. Wang, W., Kumar, P., Epstein, J., Helman, L., Moore, J. V. & Kumar, S. (1998) Cancer Res. 58, 4426-4433.
35. Bartolomei, M. S., Zemel, S. & Tilghman, S. M. (1991) Nature (London) 351, 153-155.
36. Kioussi, C., Gross, M. K. & Gruss, P. (1995) Neuron 15, 553-562.
37. Ginsberg, J. P., Davis, R. J., Bennicelli, J. L., Nauta, L. E. & Barr, F. G. (1998) Cancer Res. 58, 3542-3546.
38. Hollenbach, A. D., Sublett, J. E., McPherson, C. J. & Grosveld, G. (1999) EMBO J. 18, 3702-3711.
39. Gasque, P., Morgan, B. P., Legoedec, J., Chan, P. & Fontaine, M. (1996) J. Immunol. 156, 3402-3411.
40. Cserjesi, P., Lilly, B., Bryson, L., Wang, Y., Sassoon, D. A. & Olson, E. N. (1992) Development (Cambridge, U.K.) 115, 1087-1101.
41. Epstein, J. A., Song, B., Lakkis, M. & Wang, C. (1998) Mol. Cell. Biol. 18, 4118-4130.
42. Schafer, B. W., Czerny, T., Bernasconi, M., Genini, M. & Busslinger, M. (1994) Nucleic Acids Res. 22, 4574-4582.