DNA methylation at mammalian replication origins

Journal of Biological Chemistry

Volumn 274, Issue 36, 1999, Pages 25792-25800

  Rein, Theo ^b   Kobayashi, Takehiko ^c   Malott, Michelle ^d   Leffak, Michael ^d   DePamphilis, Melvin L ^a  

^a EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH AND HUMAN DEVELOPMENT   (United States)

^b MAX PLANCK INSTITUTE OF PSYCHIATRY   (Germany)

^c NATIONAL INSTITUTE FOR BASIC BIOLOGY   (Japan)

^d WRIGHT STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BISULFITE; DINUCLEOTIDE;

ANIMAL CELL; ARTICLE; BASE PAIRING; CELL CULTURE; CHROMOSOMAL LOCALIZATION; DNA FLANKING REGION; DNA METHYLATION; DNA REPLICATION; DNA SYNTHESIS; GENE EXPRESSION; HAMSTER; MAMMAL; NONHUMAN; NUCLEOTIDE SEQUENCE; ONCOGENE C MYC; PRIORITY JOURNAL;

ANIMALIA; CRICETINAE; ESCHERICHIA COLI; MAMMALIA;

EID: 0033520378     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.274.36.25792     Document Type: Article

References (111)

1. Sasaki, T., Sawado, T. Yamaguchi, M., and Shinomiya, T. (1999) Mol. Cell. Biol. 19, 547-555
2. Hyrien, O., Maric, C., and Méchali, M. (1995) Science 270, 994-997
3. DePamphilis, M. L. (1999) BioEssays 21, 5-16
4. Aladjem, M. I., Groudine, M., Brody, L. L., Dieken, E. S., Fournier, R. E., Wahl, G. M., and Epner, E. M. (1995) Science 270, 815-819
5. Kitsberg, D., Selig, S., Keshet, I., and Cedar, H. (1993) Nature 366, 588-590
6. Ermakova, O. V., Nguyen, L. H., Little, R. D., Chevillard, C., Riblet, R., Ashouian, N., Birshtein, B. K., and Schildkraut, C. L. (1999) Mol. Cell 3, 321-330
7. Dubey, D. D., Zhu, J., Carlson, D. L., Sharma, K., and Huberman, J. A. (1994) EMBO J. 13, 3638-3647
8. Kobayashi, T., Rein, T., and DePamphilis, M. L. (1998) Mol. Cell. Biol. 18, 3266-3277
9. DePamphilis, M. L. (1993) J. Biol. Chem. 268, 1-4
10. Carroll, S. M., DeRose, M. L., Kolman, J. L., Nonet, G. H., Kelly, R. E., and Wahl, G. M. (1993) Mol. Cell. Biol. 13, 2971-2981
11. Kelly, R. E., DeRose, M. L., Draper, B. W., and Wahl, G. M. (1995) Mol. Cell. Biol. 15, 4136-4148
12. Virta-Pearlman, T. L., Gunaratne, P. H., and Chinault, A. C. (1993) Mol. Cell. Biol. 13, 5931-5942
13. Aladjem, M. I., Rodewald, L. W., Kolman, J. L., and Wahl, G. M. (1998) Science 281, 1005-1009
14. Handeli, S., Klar, A., Meuth, M., and Cedar, H. (1989) Cell 57, 909-920
15. Orr-Weaver, T. L. (1991) BioEssays 13, 97-105
16. Kalejta, R. F., Li, X., Mesner, L. D., Dijkwel, P. A., Lin, H. B., and Hamlin, J. L. (1998) Mol. Cell 2, 797-806
17. Berberich, S., Trivedi, A., Daniel, D. C., Johnson, E. M., and Leffak, M. (1995) J. Mol. Biol. 245, 92-109
18. DePamphilis, M. L. (1996) in DNA Replication in Eukaryotic Cells (DePamphilis, M. L., ed) pp. 45-86, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
19. McWhinney, C., Waltz, S. E., and Leffak, M. (1995) DNA Cell Biol. 14, 565-579
20. Trivedi, A., Waltz, S. E., Kamath, S., and Leffak, M. (1998) DNA Cell Biol. 17, 885-896
21. Krysan, P. J., Smith, J. G., and Calos, M. P. (1993) Mol. Cell. Biol. 13, 2688-2696
22. Blow, J. J., and Chong, J. P. J. (1996) in DNA Replication in Eukaryotic Cells (DePamphilis, M. L., ed) pp. 971-982, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
23. Kipling, D., and Kearsey, S. E. (1990) Mol. Cell. Biol. 10, 265-272
24. Rein, T., Zorbas, H., and DePamphilis, M. L. (1997) Mol. Cell. Biol. 17, 416-426
25. Tasheva, E. S., and Roufa, D. J. (1994) Mol. Cell. Biol. 14, 5636-5644
26. Tasheva, E. S., and Roufa, D. J. (1995) Somatic Cell Mol. Genet. 19, 369-383
27. Rein, T., Natale, D. A., Gärtner, U., Niggemann, M., DePamphilis, M. L., and Zorbas, H. (1997) J. Biol. Chem. 272, 10021-10029
28. Araujo, F. D., Knox, J. D., Szyf, M., Price, G. B., and Zannis-Hadjopoulos, M. (1998) Mol. Cell. Biol. 18, 3475-3482
29. Gruenbaum, Y., Szyf, M., Cedar, H., and Razin, A. (1983) Proc. Natl. Acad. Sci. U. S. A. 80, 4919-4921
30. Woodcock, D. M., Simmons, D. L., Crowther, P. J., Cooper, I. A., Trainor, K. J., and Morley, A. A. (1986) Exp. Cell Res. 166, 102-112
31. Chuang, L. S.-H., Ian, H.-I., Koh, T.-W., Ng, H.-H., Xu, G., and Li, B. F. L. (1997) Science 277, 1996-2000
32. Araujo, J. D., Knox, F. D., Ramchandani, S., Peletier, R., Bigey, P., Price, G., Szyf, M., and Zannis-Hadjopoulos, M. (1999) J. Biol. Chem. 274, 9335-9341
33. Bickmore, W. A., and Carothers, A. D. (1995) J. Cell Sci. 108, 2801-2809
34. Jablonka, E., Goitein, R., Marcus, M., and Cedar, H. (1985) Chromosoma 93, 152-156
35. Selig, S., Ariel, M., Goitein, R., Marcus, M., and Cedar, H. (1988) EMBO J. 7, 419-426
36. Shafer, D. A. and Priest, J. H. (1984) Am. J. Hum. Genet. 36, 534-545
37. Subramanian, P. S., and Chinault, A. C. (1997) Somat. Cell Mol. Genet. 23, 97-109
38. Murchie, A. I. H., and Lilley, D. M. J. (1989) J. Mol. Biol. 205, 593-602
39. Zacharias, W., O'Connor, T. R., and Larson, J. E. (1988) Biochemistry 27, 2970-2978
40. Nan, X., Tate, P., Li, E., and Bird, A. (1996) Mol. Cell. Biol. 16, 414-421
41. Weitzel, J. M., Buhrmeister, H., and Strätling, W. H. (1997) Mol. Cell. Biol. 17, 5656-5666
42. Adams, R. L. P. (1990) Biochem. J. 265, 309-320
43. Szyf, M., Bozovic, V., and Tanigawa, G. (1991) J. Biol. Chem. 266, 10027-10030
44. Vogel, M. C., Papdopoulos, T., Müller-Hermelink, H. K., Drahovsky, D., and Pfeifer, G. P. (1988) FEBS Lett. 236, 9-13
45. Wu, S., and Gilbert, D. (1996) Science 271, 1270-1272
46. Phi-van, L., Sellke, C., von Bodenhausen, A., and Strätling, W. H. (1998) J. Biol. Chem. 273, 18300-18307
47. Vassilev, L., and Johnson, E. M. (1990) Mol. Cell. Biol. 10, 4899-4904
48. Waltz, S. E., Trivedi, A. A., and Leffak, M. (1996) Nucleic Acids Res. 24, 1887-1894
49. Simon, I., and Cedar, H. (1996) in DNA Replication In Eukaryotic Cells (M. L. DePamphilis, ed) pp. 387-408, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
50. Delgado, S., Gomez, M., Bird, A., and Antequera, F. (1998) EMBO J. 17, 2426-2435
51. Leffak, M., and James, C. D. (1989) Mol. Cell. Biol. 9, 586-593
52. Iguchi-Ariga, S. M., Okazaki, T., Itani, T., Ogata, M., Sato, Y., and Ariga, H. (1988) EMBO J. 7, 3135-3142
53. Rein, T., DePamphilis, M. L., and Zorbas, H. (1998) Nucleic Acids Res. 26, 2255-2264
54. Clark, S. J., Harrison, J., Paul, C. L., and Frommer, M. (1994) Nucleic Acids Res. 22, 2990-2997
55. Burhans, W. C., Vassilev, L. T., Caddle, M. S., Heintz, N. H., and DePam
56. Woodcock, D. M., Crowther, P. J., Simmons, D. L., and Cooper, I. A. (1986) Exp. Cell Res. 162, 23-32
57. Taylor, J. (1978) in DNA Synthesis: Present and Future (Molineux, I. and Kohiyama, M., eds) pp. 149-159, Plenum Press, New York
58. Oka, A., Sugimoto, K., Takanami, M., and Hirota, Y. (1980) Mol. Gen. Genet. 178, 9-20
59. Geier, G. E., and Modrich, P. (1979) J. Biol. Chem. 254, 1408-1413
60. Antequera, F., Tamame, M., Villanueva, J. R., and Santos, T. (1984) J. Biol. Chem. 259, 8033-8036
61. Boye, E., and Lobner-Olesen, A. (1990) Cell 62, 981-989
62. Brendler, T., Abeles, A., and Austin, S. (1995) EMBO J. 14, 4083-4089
63. Abeles, A., Brendler, T., and Austin, S. (1993) J. Bacteriol. 175, 7801-7807
64. Ogden, G. B., Pratt, M. J., and Schaechter, M. (1988) Cell 54, 127-135
65. Campbell, J. L., and Kleckner, N. (1990) Cell 62, 967-979
66. Lu, M., Campbell, J. L., Boye, E., and Kleckner, N. (1994) Cell 77, 413-426
67. Slater, S., Wold, S., Lu, M., Boye, E., Skarstad, K., and Kleckner, N. (1995) Cell 82, 927-936
68. von Freiesleben, U., Rasmussen, K. V., and Schlechter, M. (1994) Mol. Microbiol. 14, 763-772
69. Wold, S., Boye, E., Slater, S., Kleckner, N., and Skarstad, K. (1998) EMBO J. 17, 4158-4165
70. Kimura, T., Asai, T., Imai, M., and Takanami, M. (1989) Mol. Gen. Genet. 219, 69-74
71. Yamaki, H., Ohtsubo, E., Nagai, K., and Maeda, Y. (1988) Nucleic Acids Res. 16, 5067-5073
72. Marians, K. J. (1992) Annu. Rev. Biochem. 61, 673-719
73. Messer, W., Bellekes, U., and Lother, H. (1985) EMBO J. 4, 1327-1332
74. Russell, D. W., and Zinder, N. D. (1987) Cell 50, 1071-1079
75. Smith, D. W., Garland, A. M., Herman, G., Enns, R. E., Baker, T. A., and Zyskind, J. W. (1985) EMBO J. 4, 1319-1326
76. Landoulsi, A., Malki, A., Kern, R., Kohiyama, M., and Hughes, P. (1990) Cell 63, 1053-1060
77. Kornberg, A., and Baker, T. (1992) DNA Replication, W. H. Freeman and Co., New York
78. Gonzalgo, M. L., Hayashida, T., Bender, C. M., Pao, M. M., Tsai, Y. C., Gonzales, F. A., Nguyen, H. D., Nguyen, T. T., and Jones, P. A. (1998) Cancer Res. 58, 1245-1252
79. Loebel, D. A. F., and Johnston, P. G. (1996) Genome Res. 6, 114-123
80. Park, J. G., and Chapman, V. M. (1994) Mol. Cell. Biol. 14, 7975-7983
81. Qian, X. C., and Brent, T. P. (1997) Cancer Res. 57, 3672-3677
82. Rice, J. C., Massey-Brown, K. S., and Futscher, B. W. (1998) Oncogene 17, 1807-1812
83. Tanaka, H., Shimada, Y., Harada, H., Shinoda, M., Hatooka, S., Imamura, M., and Ishizaki, K. (1998) Cancer Res. 58, 3429-3434
84. Ghazi, H., Gonzales, F. A., and Jones, P. A. (1992) Gene (Amst.) 114, 203-210
85. Halle, J. P., Schmidt, C., and Adam, G. (1995) Mutat. Res. 316, 157-171
86. Rao, P. M., Antony, A., Rajalakshmi, S., and Sarma, D. S. (1989) Carcinogenesis 10, 933-937
87. Bird, A. (1992) Cell 70, 5-8
88. Sardi, I., Dal Canto, M., Bartoletti, R., Guazzelli, R., Travaglini, F., and Montali, E. (1998) Eur. Urol. 33, 424-430
89. Sardi, I., Dal Canto, M., Bartoletti, R., and Montali, E. (1997) Eur Urol 31, 224-230
90. Miyamura, Y., Ohtsu, H., Niwa, O., Kurishita, A., Watanabe, H., Sado, T., and Ono, T. (1993) Gerontology 89, Suppl. 1, 3-10
91. Van der Vliet, P. C. (1996) in DNA Replication in Eukaryotic Cells (DePamphilis, M. L., ed) pp. 87-118, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
92. Gardiner-Garden, M., and Frommer, M. (1987) J. Mol. Biol. 196, 261-282
93. Helmstetter, C. E. (1987) in Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology (Neidhardt, F. C., Ingraham, J. L., Low, K. B., Magasanik, B., Schaechter, M., and Umbarger, H. E., eds) pp. 1594-1605, American Society for Microbiology, Washington, D. C.
94. Warnecke, P. M., Stirzaker, C., Melki, J. R., Millar, D. S., Paul, C. L., and Clark, S. J. (1997) Nucleic Acids Res. 25, 4422-4426
95. DePamphilis, M. L. (1993) Trends Cell Biol. 3, 161-167
96. Jones, P. L., Veenstra, G. J., Wade, P. A., Vermaak, D., Kass, S. U., Landsberger, N., Strouboulis, J., and Wolffe, A. P. (1998) Nat. Genet. 19, 187-191
97. Nan, X., Ng, H. H., Johnson, C. A., Laherty, C. D., Turner, B. M., Eisenman, R. N., and Bird, A. (1998) Nature 393, 386-389
98. Kim, S. M., and Huberman, J. A. (1998) Mol. Cell. Biol. 18, 7294-7303
99. Iyer, V. and Struhl, K. (1995) EMBO J. 14, 2570-2579
100. Pemov, A., Bavykin, S., and Hamlin, J. L. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 14757-14762
101. Cusick, M. E., Herman, T. M., DePamphilis, M. L., and Wassarman, P. M. (1981) Biochemistry 20, 6648-6658
102. Cusick, M. E., Lee, K. S., DePamphilis, M. L., and Wassarman, P. M. (1983) Biochemistry 22, 3873-3884
103. Ortega, J. M., and DePamphilis, M. L. (1998) J. Cell Sci. 111, 3663-3673
104. Brendler, T., Abeles, A., and Austin, S. (1991) J. Bacteriol. 173, 3935-3942
105. Walter, J., and Newport, J. W. (1997) Science 275, 993-995
106. Dimitrova, D. S., and Gilbert, D. M. (1998) J. Cell Sci. 111, 2989-2998
107. Lu, Z. H., Sittman, D. B., Romanowski, P., and Leno, G. H. (1998) Mol. Biol. Cell 9, 1163-1176
108. Wessel, R., Ramsperger, U., Stahl, H., and Knippers, R. (1992) Virology 189, 293-303
109. Martin, R. G., and Oppenheim, A. (1977) Cell 11, 859-869
110. Wu, J. R., Keezer, S. M., and Gilbert, D. M. (1998) EMBO J. 17, 1810-1818
111. Laughlin, T. J., and Taylor, J. H. (1979) Chromosoma 75, 19-35