메뉴 건너뛰기




Volumn 283, Issue 4, 1998, Pages 771-783

RNase P RNA structure and cleavage reflect the primary structure of tRNA genes

Author keywords

Ribozyme; RNase P; tRNA precursors; tRNA processing

Indexed keywords

RIBONUCLEASE P; TRANSFER RNA;

EID: 0032491460     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1998.2135     Document Type: Article
Times cited : (32)

References (44)
  • 1
    • 85030346381 scopus 로고    scopus 로고
    • Ribonuclease P
    • R. Gesteland, T. Cech, Atkins J. In the press edit.
    • Altman S., Kirsebom L.A. Ribonuclease P. Gesteland R., Cech T., Atkins J. RNA world. vol. 2:1998;. In the press edit.
    • (1998) RNA World , vol.2
    • Altman, S.1    Kirsebom, L.A.2
  • 2
    • 0001636640 scopus 로고
    • Recent studies of RNase P
    • D. Söll, & U. RajBhandary. Washington, DC: American Society for Microbiology
    • Altman S., Kirsebom L.A., Talbot S. Recent studies of RNase P. Söll D., RajBhandary U. tRNA: Structure, Biosynthesis, and Function. 1995;67-78 American Society for Microbiology, Washington, DC
    • (1995) TRNA: Structure, Biosynthesis, and Function , pp. 67-78
    • Altman, S.1    Kirsebom, L.A.2    Talbot, S.3
  • 7
    • 0027291331 scopus 로고
    • Staphylococcus aureus has clustered tRNA genes
    • Green C.J., Vold B.S. Staphylococcus aureus has clustered tRNA genes. J. Bacteriol. 175:1993;5091-5096
    • (1993) J. Bacteriol. , vol.175 , pp. 5091-5096
    • Green, C.J.1    Vold, B.S.2
  • 8
    • 0027282805 scopus 로고
    • A physical assay for and kinetic analysis of the interactions between M1 RNA and tRNA precursor substrates
    • Guerrier-Takada C., Altman S. A physical assay for and kinetic analysis of the interactions between M1 RNA and tRNA precursor substrates. Biochemistry. 32:1993;7152-7161
    • (1993) Biochemistry , vol.32 , pp. 7152-7161
    • Guerrier-Takada, C.1    Altman, S.2
  • 9
    • 0021013526 scopus 로고
    • The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme
    • Guerrier-Takada C., Gardiner K., Marsh T., Pace N., Altman S. The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme. Cell. 35:1983;849-857
    • (1983) Cell , vol.35 , pp. 849-857
    • Guerrier-Takada, C.1    Gardiner, K.2    Marsh, T.3    Pace, N.4    Altman, S.5
  • 10
    • 0024851604 scopus 로고
    • Specific interactions in RNA enzyme-substrate complexes
    • Guerrier-Takada C., Lumelsky N., Altman S. Specific interactions in RNA enzyme-substrate complexes. Science. 286:1989;1578-1584
    • (1989) Science , vol.286 , pp. 1578-1584
    • Guerrier-Takada, C.1    Lumelsky, N.2    Altman, S.3
  • 11
    • 0029803926 scopus 로고    scopus 로고
    • Structure and evolution of ribonuclease P RNA in Gram-positive bacteria
    • Haas E.S., Banta A.B., Harris J.K., Pace N.R., Brown J.W. Structure and evolution of ribonuclease P RNA in Gram-positive bacteria. Nucl. Acids Res. 24:1996;4775-4782
    • (1996) Nucl. Acids Res. , vol.24 , pp. 4775-4782
    • Haas, E.S.1    Banta, A.B.2    Harris, J.K.3    Pace, N.R.4    Brown, J.W.5
  • 12
    • 0029980154 scopus 로고    scopus 로고
    • Differentiation of Chlamydia spp. by sequence determination and restriction endonuclease cleavage of RNase P RNA genes
    • Herrmann B., Winqvist O., Mattsson J.G., Kirsebom L.A. Differentiation of Chlamydia spp. by sequence determination and restriction endonuclease cleavage of RNase P RNA genes. J. Clin. Microbiol. 34:1996;1897-1902
    • (1996) J. Clin. Microbiol. , vol.34 , pp. 1897-1902
    • Herrmann, B.1    Winqvist, O.2    Mattsson, J.G.3    Kirsebom, L.A.4
  • 14
    • 0025992237 scopus 로고
    • Site-specific cleavage by metal ion cofactors and inhibitors of M1 RNA, the catalytic subunit of RNase P from Escherichia coli
    • Kazakov S., Altman S. Site-specific cleavage by metal ion cofactors and inhibitors of M1 RNA, the catalytic subunit of RNase P from Escherichia coli. Proc. Natl Acad. Sci. USA. 88:1991;9193-9197
    • (1991) Proc. Natl Acad. Sci. USA , vol.88 , pp. 9193-9197
    • Kazakov, S.1    Altman, S.2
  • 15
    • 0029131905 scopus 로고
    • RNase P - A 'Scarlet Pimpernel'
    • Kirsebom L.A. RNase P - a 'Scarlet Pimpernel'. Mol. Microbiol. 17:1995;411-420
    • (1995) Mol. Microbiol. , vol.17 , pp. 411-420
    • Kirsebom, L.A.1
  • 16
    • 0024974797 scopus 로고
    • Reaction in vitro of some mutants of RNase P with wild-type and temperature-sensitive substrates
    • Kirsebom L.A., Altman S. Reaction in vitro of some mutants of RNase P with wild-type and temperature-sensitive substrates. J. Mol. Biol. 207:1989;837-840
    • (1989) J. Mol. Biol. , vol.207 , pp. 837-840
    • Kirsebom, L.A.1    Altman, S.2
  • 17
    • 0026555146 scopus 로고
    • The kinetics and specificity of cleavage by RNase P is mainly dependent on the structure of the amino acid acceptor stem
    • Kirsebom L.A., Svärd S. The kinetics and specificity of cleavage by RNase P is mainly dependent on the structure of the amino acid acceptor stem. Nucl. Acids Res. 20:1992;425-432
    • (1992) Nucl. Acids Res. , vol.20 , pp. 425-432
    • Kirsebom, L.A.1    Svärd, S.2
  • 18
    • 0027228358 scopus 로고
    • Identification of a region within M1 RNA of Escherichia coli RNase P important for the location of the cleavage site on a wild-type tRNA precursor
    • Kirsebom L.A., Svärd S.G. Identification of a region within M1 RNA of Escherichia coli RNase P important for the location of the cleavage site on a wild-type tRNA precursor. J. Mol. Biol. 231:1993;594-604
    • (1993) J. Mol. Biol. , vol.231 , pp. 594-604
    • Kirsebom, L.A.1    Svärd, S.G.2
  • 19
    • 0027973546 scopus 로고
    • Base-pairing between Escherichia coli RNase P RNA and its substrate
    • Kirsebom L.A., Svärd S.G. Base-pairing between Escherichia coli RNase P RNA and its substrate. EMBO J. 13:1994;4870-4876
    • (1994) EMBO J. , vol.13 , pp. 4870-4876
    • Kirsebom, L.A.1    Svärd, S.G.2
  • 20
    • 0029898934 scopus 로고    scopus 로고
    • Different cleavage sites are aligned differently in the active site of M1 RNA, the catalytic subunit of Escherichia coli RNase P
    • Kufel J., Kirsebom L.A. Different cleavage sites are aligned differently in the active site of M1 RNA, the catalytic subunit of Escherichia coli RNase P. Proc. Natl Acad. Sci. USA. 93:1996;6085-6090
    • (1996) Proc. Natl Acad. Sci. USA , vol.93 , pp. 6085-6090
    • Kufel, J.1    Kirsebom, L.A.2
  • 21
    • 0031849761 scopus 로고    scopus 로고
    • The P15-loop of Escherichia coli RNase P RNA is an autonomous divalent metal ion binding domain
    • Kufel J., Kirsebom L.A. The P15-loop of Escherichia coli RNase P RNA is an autonomous divalent metal ion binding domain. RNA. 4:1998;777-788
    • (1998) RNA , vol.4 , pp. 777-788
    • Kufel, J.1    Kirsebom, L.A.2
  • 23
    • 0028146083 scopus 로고
    • Phylogenetic comparative chemical footprint analysis of the interaction between ribonuclease P RNA and tRNA
    • LaGrandeur T.E., Hüttenhofer A., Noller H.F., Pace N.R. Phylogenetic comparative chemical footprint analysis of the interaction between ribonuclease P RNA and tRNA. EMBO J. 13:1994;3945-3952
    • (1994) EMBO J. , vol.13 , pp. 3945-3952
    • Lagrandeur, T.E.1    Hüttenhofer, A.2    Noller, H.F.3    Pace, N.R.4
  • 25
    • 0032574748 scopus 로고    scopus 로고
    • fMet in cleavage site selection by Escherichia coli RNase P in vitro
    • fMet in cleavage site selection by Escherichia coli RNase P in vitro. Biochemistry. 37:1998;6041-6049
    • (1998) Biochemistry , vol.37 , pp. 6041-6049
    • Lazard, M.1    Meinnel, T.2
  • 27
    • 0028070418 scopus 로고
    • Characterization of the Borrelia burgdorferi RNase P RNA gene reveals a novel tertiary interaction
    • Mattsson J.G., Svärd S.G., Kirsebom L.A. Characterization of the Borrelia burgdorferi RNase P RNA gene reveals a novel tertiary interaction. J. Mol. Biol. 241:1994;1-6
    • (1994) J. Mol. Biol. , vol.241 , pp. 1-6
    • Mattsson, J.G.1    Svärd, S.G.2    Kirsebom, L.A.3
  • 28
    • 0028982837 scopus 로고
    • fMet by Escherichia coli RNase P is specified by a guanosine of the 5′-flanking sequence
    • fMet by Escherichia coli RNase P is specified by a guanosine of the 5′-flanking sequence. J. Biol. Chem. 270:1995;15908-15914
    • (1995) J. Biol. Chem. , vol.270 , pp. 15908-15914
    • Meinnel, T.1    Blanquet, S.2
  • 30
    • 0025040619 scopus 로고
    • The organization and evolution of transfer RNA genes in Mycoplasma capricolum
    • Muto A., Andachi Y., Yuzawa H., Yamao F., Osawa S. The organization and evolution of transfer RNA genes in Mycoplasma capricolum. Nucl. Acids Res. 17:1990;5037-5043
    • (1990) Nucl. Acids Res. , vol.17 , pp. 5037-5043
    • Muto, A.1    Andachi, Y.2    Yuzawa, H.3    Yamao, F.4    Osawa, S.5
  • 31
    • 0028131972 scopus 로고
    • Interaction of the 3′-end of tRNA with ribonuclease P RNA
    • Oh B-K., Pace N.R. Interaction of the 3′-end of tRNA with ribonuclease P RNA. Nucl. Acids Res. 22:1994;4087-4094
    • (1994) Nucl. Acids Res. , vol.22 , pp. 4087-4094
    • Oh, B.-K.1    Pace, N.R.2
  • 32
    • 0029874464 scopus 로고    scopus 로고
    • Multiple substrate binding sites in the ribozyme from Bacillus subtilis RNase P
    • Pan T., Jakacka M. Multiple substrate binding sites in the ribozyme from Bacillus subtilis RNase P. EMBO J. 15:1996;2249-2255
    • (1996) EMBO J. , vol.15 , pp. 2249-2255
    • Pan, T.1    Jakacka, M.2
  • 33
    • 0027223564 scopus 로고
    • Pathway of activation by magnesium ions of substrates for the catalytic subunit of RNase P from Escherichia coli
    • Perreault J.-P., Altman S. Pathway of activation by magnesium ions of substrates for the catalytic subunit of RNase P from Escherichia coli. J. Mol. Biol. 230:1993;750-756
    • (1993) J. Mol. Biol. , vol.230 , pp. 750-756
    • Perreault, J.-P.1    Altman, S.2
  • 34
    • 0022369309 scopus 로고
    • Cloning and nucleotide sequence analysis of transfer RNA genes from Mycoplasma mycoides
    • Samuelsson T., Elias P., Lustig F., Guindy Y.S. Cloning and nucleotide sequence analysis of transfer RNA genes from Mycoplasma mycoides. Biochem. J. 232:1985;223-228
    • (1985) Biochem. J. , vol.232 , pp. 223-228
    • Samuelsson, T.1    Elias, P.2    Lustig, F.3    Guindy, Y.S.4
  • 35
    • 0026497278 scopus 로고
    • Several regions of a tRNA precursor determine the Escherichia coli RNase P cleavage site
    • Svärd S.G., Kirsebom L.A. Several regions of a tRNA precursor determine the Escherichia coli RNase P cleavage site. J. Mol. Biol. 227:1992;1019-1031
    • (1992) J. Mol. Biol. , vol.227 , pp. 1019-1031
    • Svärd, S.G.1    Kirsebom, L.A.2
  • 36
    • 0028322224 scopus 로고
    • Cloning and characterization of the RNase P RNA genes from two porcine mycoplasmas
    • Svärd S.G., Mattsson J.G., Johansson K.-E., Kirsebom L.A. Cloning and characterization of the RNase P RNA genes from two porcine mycoplasmas. Mol. Microbiol. 11:1994;849-859
    • (1994) Mol. Microbiol. , vol.11 , pp. 849-859
    • Svärd, S.G.1    Mattsson, J.G.2    Johansson, K.-E.3    Kirsebom, L.A.4
  • 37
    • 0029903905 scopus 로고    scopus 로고
    • Phylogenetic comparative mutational analysis of the base-pairing between RNase P RNA and its substrate
    • Svärd S.G., Kagardt U., Kirsebom L.A. Phylogenetic comparative mutational analysis of the base-pairing between RNase P RNA and its substrate. RNA. 2:1996;463-472
    • (1996) RNA , vol.2 , pp. 463-472
    • Svärd, S.G.1    Kagardt, U.2    Kirsebom, L.A.3
  • 38
    • 0027174003 scopus 로고
    • Product release is a rate-limiting step during cleavage by the catalytic RNA subunit of Escherichia coli RNase P
    • Tallsjö A., Kirsebom L.A. Product release is a rate-limiting step during cleavage by the catalytic RNA subunit of Escherichia coli RNase P. Nucl. Acids Res. 21:1993;51-57
    • (1993) Nucl. Acids Res. , vol.21 , pp. 51-57
    • Tallsjö, A.1    Kirsebom, L.A.2
  • 39
    • 0029827586 scopus 로고    scopus 로고
    • Interaction between Escherichia coli RNase P RNA and the discriminator base results in slow product release
    • Tallsjö A., Kufel J., Kirsebom L.A. Interaction between Escherichia coli RNase P RNA and the discriminator base results in slow product release. RNA. 2:1996;299-307
    • (1996) RNA , vol.2 , pp. 299-307
    • Tallsjö, A.1    Kufel, J.2    Kirsebom, L.A.3
  • 41
    • 0027295076 scopus 로고
    • Comparative structural analysis of nuclear RNase P RNAs from yeast
    • Tranguch A.J., Engelke D.R. Comparative structural analysis of nuclear RNase P RNAs from yeast. Biochemistry. 268:1993;14045-14055
    • (1993) Biochemistry , vol.268 , pp. 14045-14055
    • Tranguch, A.J.1    Engelke, D.R.2
  • 42
    • 0030796854 scopus 로고    scopus 로고
    • The RNase P RNA from cyanobacteria: Short tandemly repeated repetitive (STRR) sequences are present within the RNase P RNA gene in heterocyst-forming cyanobacteria
    • Vioque A. The RNase P RNA from cyanobacteria short tandemly repeated repetitive (STRR) sequences are present within the RNase P RNA gene in heterocyst-forming cyanobacteria. Nucl. Acids Res. 25:1997;3471-3477
    • (1997) Nucl. Acids Res. , vol.25 , pp. 3471-3477
    • Vioque, A.1
  • 43
    • 0023696278 scopus 로고
    • Protein-RNA interactions in the RNase P holoenzyme from Escherichia coli
    • Vioque A., Arnez J., Altman S. Protein-RNA interactions in the RNase P holoenzyme from Escherichia coli. J. Mol. Biol. 202:1988;835-848
    • (1988) J. Mol. Biol. , vol.202 , pp. 835-848
    • Vioque, A.1    Arnez, J.2    Altman, S.3
  • 44
    • 0027729890 scopus 로고
    • Lead-catalyzed cleavage of ribonuclease P RNA as a probe for integrity of tertiary structure
    • Zito K., Hüttenhofer A., Pace N.R. Lead-catalyzed cleavage of ribonuclease P RNA as a probe for integrity of tertiary structure. Nucl. Acids Res. 21:1993;5916-5920
    • (1993) Nucl. Acids Res. , vol.21 , pp. 5916-5920
    • Zito, K.1    Hüttenhofer, A.2    Pace, N.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.