메뉴 건너뛰기




Volumn 3, Issue 2, 1997, Pages 175-185

Nuclear pre-tRNA terminal structure and RNase P recognition

Author keywords

enzyme substrate interaction; kinetic constants; nuclear RNase P; pre tRNA structure

Indexed keywords

RIBONUCLEASE P; RNA PRECURSOR; TRANSFER RNA;

EID: 0031029862     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (37)

References (53)
  • 1
    • 0024529973 scopus 로고
    • Ribonuclease P: An enzyme with a catalytic RNA subunit
    • Altman S. 1989. Ribonuclease P: An enzyme with a catalytic RNA subunit. Adv Enzymol Relat Areas Mol Biol 62:1-36.
    • (1989) Adv Enzymol Relat Areas Mol Biol , vol.62 , pp. 1-36
    • Altman, S.1
  • 3
    • 0025171938 scopus 로고
    • RNA bulges and the helical periodicity of double-stranded RNA
    • Bhattacharyya A, Murchie AIH, Lilley DMJ. 1990. RNA bulges and the helical periodicity of double-stranded RNA. Nature 343:484-487.
    • (1990) Nature , vol.343 , pp. 484-487
    • Bhattacharyya, A.1    Murchie, A.I.H.2    Lilley, D.M.J.3
  • 7
    • 0025357508 scopus 로고
    • Characterization of ribonuclease P from the archaebacterium Sulfolobus colfataricus
    • Darr SC, Pace B, Pace NR. 1990. Characterization of ribonuclease P from the archaebacterium Sulfolobus colfataricus. J Biol Chem 265:12927-12932.
    • (1990) J Biol Chem , vol.265 , pp. 12927-12932
    • Darr, S.C.1    Pace, B.2    Pace, N.R.3
  • 8
    • 0024340676 scopus 로고
    • Substrate structural requirements of Schizosaccharomyces pombe RNase P
    • Drainas D, Zimmerly S, Willis I, Soil D. 1989. Substrate structural requirements of Schizosaccharomyces pombe RNase P. FEBS Lett 251:84-88.
    • (1989) FEBS Lett , vol.251 , pp. 84-88
    • Drainas, D.1    Zimmerly, S.2    Willis, I.3    Soil, D.4
  • 9
    • 0022996130 scopus 로고
    • 2-dimethyl guanosine modification of both mitochondrial and cytoplasmic tRNA in Saccharomyces cerevisiae
    • 2-dimethyl guanosine modification of both mitochondrial and cytoplasmic tRNA in Saccharomyces cerevisiae. J Biol Chem 261:9703-9709.
    • (1986) J Biol Chem , vol.261 , pp. 9703-9709
    • Ellis, S.R.1    Morales, M.J.2    Li, J.M.3    Hopper, A.K.4    Martin, N.C.5
  • 10
    • 0021894203 scopus 로고
    • Asp dimeric precursor by a homologous component from Saccharomyces cerevisiae
    • Asp dimeric precursor by a homologous component from Saccharomyces cerevisiae. J Biol Chem 260:1271-1279.
    • (1985) J Biol Chem , vol.260 , pp. 1271-1279
    • Engelke, D.R.1    Gegenheimer, P.2    Abelson, J.3
  • 11
    • 0014430593 scopus 로고
    • Depolymerization of ribonucleic acid by plumbous ion
    • Farkas WR. 1968. Depolymerization of ribonucleic acid by plumbous ion. Biochim Biophys Acta 155:401-409.
    • (1968) Biochim Biophys Acta , vol.155 , pp. 401-409
    • Farkas, W.R.1
  • 12
    • 0027295270 scopus 로고
    • Modification interference approach to detect ribose moieties important for the optimal activity of a ribozyme
    • Gaur RK, Krupp G. 1993. Modification interference approach to detect ribose moieties important for the optimal activity of a ribozyme. Nucleic Acids Res 21:21-26.
    • (1993) Nucleic Acids Res , vol.21 , pp. 21-26
    • Gaur, R.K.1    Krupp, G.2
  • 14
    • 0023864815 scopus 로고
    • His precursors by the catalytic RNA component of RNase P
    • His precursors by the catalytic RNA component of RNase P. J Biol Chem 263:652-657.
    • (1988) J Biol Chem , vol.263 , pp. 652-657
    • Green, C.J.1    Void, B.S.2
  • 15
    • 0021013526 scopus 로고
    • The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme
    • Guerrier-Takada C, Gardiner K, Marsh T, Pace N, Altman S. 1983. The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme. Cell 35:849-857.
    • (1983) Cell , vol.35 , pp. 849-857
    • Guerrier-Takada, C.1    Gardiner, K.2    Marsh, T.3    Pace, N.4    Altman, S.5
  • 16
    • 0029018021 scopus 로고
    • Rp-phosphorothioate modifications in RNase P RNA that interfere with tRNA binding
    • Hardt WD, Warnecke JM, Erdmann VA, Hartmann RK. 1995. Rp-phosphorothioate modifications in RNase P RNA that interfere with tRNA binding. EMBO J 14:2935-2944.
    • (1995) EMBO J , vol.14 , pp. 2935-2944
    • Hardt, W.D.1    Warnecke, J.M.2    Erdmann, V.A.3    Hartmann, R.K.4
  • 17
    • 0027990605 scopus 로고
    • Use of photoaffinity crosslinking and molecular modeling to analyze the global architecture of ribonuclease P RNA
    • Harris ME, Nolan JM, Malhorta A, Brown JW, Harvey SC, Pace NR. 1994. Use of photoaffinity crosslinking and molecular modeling to analyze the global architecture of ribonuclease P RNA. EMBO J 13:3953-3963.
    • (1994) EMBO J , vol.13 , pp. 3953-3963
    • Harris, M.E.1    Nolan, J.M.2    Malhorta, A.3    Brown, J.W.4    Harvey, S.C.5    Pace, N.R.6
  • 18
    • 0028279011 scopus 로고
    • Further perspective on the catalytic core and secondary structure of ribonuclease P RNA
    • Hass ES, Brown JW, Pitulle C, Pace NR. 1994. Further perspective on the catalytic core and secondary structure of ribonuclease P RNA. Proc Natl Acad Sci USA 91:2527-2531.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 2527-2531
    • Hass, E.S.1    Brown, J.W.2    Pitulle, C.3    Pace, N.R.4
  • 19
    • 0023651432 scopus 로고
    • Alteration of a mitochondrial tRNA precursor 5′ leader abolishes its cleavage by yeast mitochondrial RNase P
    • Hollingsworth MJ, Martin NC. 1987. Alteration of a mitochondrial tRNA precursor 5′ leader abolishes its cleavage by yeast mitochondrial RNase P. Nucleic Acids Res 15:8845-8860.
    • (1987) Nucleic Acids Res , vol.15 , pp. 8845-8860
    • Hollingsworth, M.J.1    Martin, N.C.2
  • 20
    • 0026592457 scopus 로고
    • The acceptor stem in pre-tRNAs determines the cleavage specificity of RNase P
    • Holm PS, Krupp G. 1992. The acceptor stem in pre-tRNAs determines the cleavage specificity of RNase P. Nucleic Acids Res 20:421-423.
    • (1992) Nucleic Acids Res , vol.20 , pp. 421-423
    • Holm, P.S.1    Krupp, G.2
  • 21
    • 0022545540 scopus 로고
    • Direct identification of small sequences changes in chromosomal DNA
    • Huibregtse J, Engelke DR. 1986. Direct identification of small sequences changes in chromosomal DNA. Gene 44:151-158.
    • (1986) Gene , vol.44 , pp. 151-158
    • Huibregtse, J.1    Engelke, D.R.2
  • 23
    • 0024286617 scopus 로고
    • The secondary structure of ribonuclease P RNA, the catalytic element of a ribonucleoprotein enzyme
    • James BD, Olsen GJ, Liu J, Pace NR. 1988. The secondary structure of ribonuclease P RNA, the catalytic element of a ribonucleoprotein enzyme. Cell 52:19-26.
    • (1988) Cell , vol.52 , pp. 19-26
    • James, B.D.1    Olsen, G.J.2    Liu, J.3    Pace, N.R.4
  • 24
    • 0025361020 scopus 로고
    • The methylation of one specific guanosine in a pre-tRNA prevents cleavage by RNase P and by the catalytic M1 RNA
    • Kahle D, Wehmeyer U, Char S, Krupp G. 1990a. The methylation of one specific guanosine in a pre-tRNA prevents cleavage by RNase P and by the catalytic M1 RNA. Nucleic Acids Res 18:837-844.
    • (1990) Nucleic Acids Res , vol.18 , pp. 837-844
    • Kahle, D.1    Wehmeyer, U.2    Char, S.3    Krupp, G.4
  • 25
    • 0025297355 scopus 로고
    • Substrate recognition by RNase P and by catalytic Ml RNA: Identification of possible contact points in pre-tRNAs
    • Kahle D, Wehmeyer U, Krupp G. 1990b. Substrate recognition by RNase P and by catalytic Ml RNA: Identification of possible contact points in pre-tRNAs. EMBO J 9:1929-1937.
    • (1990) EMBO J , vol.9 , pp. 1929-1937
    • Kahle, D.1    Wehmeyer, U.2    Krupp, G.3
  • 26
    • 0024360443 scopus 로고
    • Transcription factor IIIB generates extended DNA interactions in RNA polymerase III transcription complexes on tRNA genes
    • Kassavetis GA, Riggs DL, Negri R, Nguyen LH, Geiduschek EP. 1989. Transcription factor IIIB generates extended DNA interactions in RNA polymerase III transcription complexes on tRNA genes. Mol Cell Biol 9:2551-2566.
    • (1989) Mol Cell Biol , vol.9 , pp. 2551-2566
    • Kassavetis, G.A.1    Riggs, D.L.2    Negri, R.3    Nguyen, L.H.4    Geiduschek, E.P.5
  • 27
    • 0024974797 scopus 로고
    • Reaction in vitro of some mutants of RNase P with wild-type and temperature-sensitive substrates
    • Kirsebom LA, Altman S. 1989. Reaction in vitro of some mutants of RNase P with wild-type and temperature-sensitive substrates. J Mol Biol 207:837-840.
    • (1989) J Mol Biol , vol.207 , pp. 837-840
    • Kirsebom, L.A.1    Altman, S.2
  • 28
    • 0026555146 scopus 로고
    • The kinetics and specificity of cleavage by RNase P is mainly dependent on the structure of the amino acid acceptor stem
    • Kirsebom LA, Svärd SG. 1992. The kinetics and specificity of cleavage by RNase P is mainly dependent on the structure of the amino acid acceptor stem. Nucleic Acids Res 20:425-432.
    • (1992) Nucleic Acids Res , vol.20 , pp. 425-432
    • Kirsebom, L.A.1    Svärd, S.G.2
  • 29
    • 0027973546 scopus 로고
    • Base pairing between Escherichia coli RNase P RNA and its substrate
    • Kirsebom LA, Svärd SG. 1994. Base pairing between Escherichia coli RNase P RNA and its substrate. EMBO J 13:4870-4876.
    • (1994) EMBO J , vol.13 , pp. 4870-4876
    • Kirsebom, L.A.1    Svärd, S.G.2
  • 30
    • 0025601901 scopus 로고
    • Protection from chemical modification of nucleotides in complexes of M1 RNA, the catalytic subunit of RNase P from E. coli and tRNA precursors
    • Knap AK, Wesolowski D, Altman S. 1990. Protection from chemical modification of nucleotides in complexes of M1 RNA, the catalytic subunit of RNase P from E. coli and tRNA precursors. Biochimie 72:779-790.
    • (1990) Biochimie , vol.72 , pp. 779-790
    • Knap, A.K.1    Wesolowski, D.2    Altman, S.3
  • 31
    • 0026016866 scopus 로고
    • Sequence changes in both flanking sequences of a pre-tRNA influence the cleavage specificity of RNase P
    • Krupp G, Kahle D, Vogt T, Char S. 1991. Sequence changes in both flanking sequences of a pre-tRNA influence the cleavage specificity of RNase P. J Mol Biol 217:637-648.
    • (1991) J Mol Biol , vol.217 , pp. 637-648
    • Krupp, G.1    Kahle, D.2    Vogt, T.3    Char, S.4
  • 32
    • 0024674579 scopus 로고
    • Partial characterization of an RNA component that copurifies with Saccharomyces cerevisiae RNase P
    • Lee JY, Engelke DR. 1989. Partial characterization of an RNA component that copurifies with Saccharomyces cerevisiae RNase P. Mol Cell Biol 9:2536-2543.
    • (1989) Mol Cell Biol , vol.9 , pp. 2536-2543
    • Lee, J.Y.1    Engelke, D.R.2
  • 33
    • 0025977154 scopus 로고
    • Characterization of RPR1, an essential gene encoding the RNA component of Saccharomyces cerevisiae nuclear RNase P
    • Lee JY, Rohlman CE, Molony LA, Engelke DR. 1991. Characterization of RPR1, an essential gene encoding the RNA component of Saccharomyces cerevisiae nuclear RNase P. Mol Cell Biol 11:721-730.
    • (1991) Mol Cell Biol , vol.11 , pp. 721-730
    • Lee, J.Y.1    Rohlman, C.E.2    Molony, L.A.3    Engelke, D.R.4
  • 34
    • 0021951252 scopus 로고
    • Transfer RNA splicing in Saccharomyces cerevisiae
    • Lee MC, Knapp G. 1985. Transfer RNA splicing in Saccharomyces cerevisiae. J Biol Chem 260:3108-3115.
    • (1985) J Biol Chem , vol.260 , pp. 3108-3115
    • Lee, M.C.1    Knapp, G.2
  • 35
    • 0024296378 scopus 로고
    • Effects of tRNA-intron structure on cleavage of precursor tRNAs by RNase P from Saccharomyces cerevisiae
    • Leontis N, Dalio A, Strobel M, Engelke D. 1988. Effects of tRNA-intron structure on cleavage of precursor tRNAs by RNase P from Saccharomyces cerevisiae. Nucleic Acids Res 16:2537-2552.
    • (1988) Nucleic Acids Res , vol.16 , pp. 2537-2552
    • Leontis, N.1    Dalio, A.2    Strobel, M.3    Engelke, D.4
  • 37
    • 0021064385 scopus 로고
    • tRNA gene transcription in yeast: Effects of specified base substitutions in the intragenic promoter
    • Newman AJ, Ogden RC, Abelson J. 1983. tRNA gene transcription in yeast: Effects of specified base substitutions in the intragenic promoter. Cell 35:117-125.
    • (1983) Cell , vol.35 , pp. 117-125
    • Newman, A.J.1    Ogden, R.C.2    Abelson, J.3
  • 38
    • 0023968857 scopus 로고
    • Yeast RNase P: Catalytic activity and substrate binding are specific functions
    • Nichols M, Soll D, Willis I. 1988. Yeast RNase P: Catalytic activity and substrate binding are specific functions. Proc Natl Acad Sci USA 85:1379-1383.
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 1379-1383
    • Nichols, M.1    Soll, D.2    Willis, I.3
  • 39
    • 0027182379 scopus 로고
    • Circularly permuted tRNAs as specific photoaffinity probes of ribonuclease P RNA structure
    • Nolan JM, Burke DH, Pace NR. 1993. Circularly permuted tRNAs as specific photoaffinity probes of ribonuclease P RNA structure. Science 261:762-765.
    • (1993) Science , vol.261 , pp. 762-765
    • Nolan, J.M.1    Burke, D.H.2    Pace, N.R.3
  • 40
    • 0029854088 scopus 로고    scopus 로고
    • Mutational analysis of Saccharomyces cerevisiae nuclear RNase P: Randomization of universally conserved positions in the RNA subunit
    • Pagán-Ramos E, Lee Y, Engelke DR. 1996a. Mutational analysis of Saccharomyces cerevisiae nuclear RNase P: Randomization of universally conserved positions in the RNA subunit. RNA 2:441-451.
    • (1996) RNA , vol.2 , pp. 441-451
    • Pagán-Ramos, E.1    Lee, Y.2    Engelke, D.R.3
  • 41
    • 0029959585 scopus 로고    scopus 로고
    • A conserved RNA motif involved in divalent cation utilization by nuclear RNase P RNA
    • Pagán-Ramos E, Lee Y, Engelke DR. 1996b. A conserved RNA motif involved in divalent cation utilization by nuclear RNase P RNA. RNA 2:1100-1109.
    • (1996) RNA , vol.2 , pp. 1100-1109
    • Pagán-Ramos, E.1    Lee, Y.2    Engelke, D.R.3
  • 43
    • 0021100048 scopus 로고
    • The role of non-coding DNA sequences in transcription and processing of a yeast tRNA
    • Raymond GJ, Johnson JD. 1983. The role of non-coding DNA sequences in transcription and processing of a yeast tRNA. Nucleic Acids Res 11:5969-5988.
    • (1983) Nucleic Acids Res , vol.11 , pp. 5969-5988
    • Raymond, G.J.1    Johnson, J.D.2
  • 44
    • 0023865082 scopus 로고
    • Role of the protein moiety of ribonuclease P, a ribonucleoprotein enzyme
    • Reich C, Olsen GJ, Pace B, Pace NR. 1988. Role of the protein moiety of ribonuclease P, a ribonucleoprotein enzyme. Science 239:178-181.
    • (1988) Science , vol.239 , pp. 178-181
    • Reich, C.1    Olsen, G.J.2    Pace, B.3    Pace, N.R.4
  • 45
    • 0024669291 scopus 로고
    • A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae
    • Sikorski RS, Hieter P. 1989. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 322:19-27.
    • (1989) Genetics , vol.322 , pp. 19-27
    • Sikorski, R.S.1    Hieter, P.2
  • 46
    • 0028927259 scopus 로고
    • Partial purification and characterization of RNase P from Dictyostelium discoideum
    • Stathopoulos C, Kalpaxis DL, Drainas D. 1995. Partial purification and characterization of RNase P from Dictyostelium discoideum. Eur J Biochem 228:976-980.
    • (1995) Eur J Biochem , vol.228 , pp. 976-980
    • Stathopoulos, C.1    Kalpaxis, D.L.2    Drainas, D.3
  • 47
    • 0022751167 scopus 로고
    • Effect of intron mutations on processing and function of Saccharomyces cerevisiae SUP53 tRNA in vitro and in vivo
    • Strobel MC, Abelson J. 1986a. Effect of intron mutations on processing and function of Saccharomyces cerevisiae SUP53 tRNA in vitro and in vivo. Mol Cell Biol 6:2663-2673.
    • (1986) Mol Cell Biol , vol.6 , pp. 2663-2673
    • Strobel, M.C.1    Abelson, J.2
  • 48
    • 0022755667 scopus 로고
    • Intron mutations affect splicing of Saccharomyces cerevisiae SUP53 precursor tRNA
    • Strobel MC, Abelson J. 1986b. Intron mutations affect splicing of Saccharomyces cerevisiae SUP53 precursor tRNA. Mol Cell Biol 6:2674-2683.
    • (1986) Mol Cell Biol , vol.6 , pp. 2674-2683
    • Strobel, M.C.1    Abelson, J.2
  • 49
    • 0029903905 scopus 로고    scopus 로고
    • Phylogenetic comparative mutational analysis of the base-pairing between RNase P RNA and its substrate
    • Svärd SG, Kagardt U, Kirsebom LA. 1996. Phylogenetic comparative mutational analysis of the base-pairing between RNase P RNA and its substrate. RNA 2:463-472.
    • (1996) RNA , vol.2 , pp. 463-472
    • Svärd, S.G.1    Kagardt, U.2    Kirsebom, L.A.3
  • 50
    • 0025980210 scopus 로고
    • Nucleotides in precursor tRNAs that are required intact for catalysis by RNase P RNAs
    • Thurlow DL, Shilowski D, Marsh TL. 1991. Nucleotides in precursor tRNAs that are required intact for catalysis by RNase P RNAs. Nucleic Acids Res 19:885-891.
    • (1991) Nucleic Acids Res , vol.19 , pp. 885-891
    • Thurlow, D.L.1    Shilowski, D.2    Marsh, T.L.3
  • 51
    • 0027295076 scopus 로고
    • Comparative structural analysis of nuclear RNase P RNAs from yeast
    • Tranguch AJ, Engelke DR. 1993. Comparative structural analysis of nuclear RNase P RNAs from yeast. J Biol Chem 268:14045-14055.
    • (1993) J Biol Chem , vol.268 , pp. 14045-14055
    • Tranguch, A.J.1    Engelke, D.R.2
  • 53
    • 0028362214 scopus 로고
    • Three-dimensional working model of M1 RNA, the catalytic RNA subunit of ribonuclease P from Escherichia coli
    • Westhof E, Altman S. 1994. Three-dimensional working model of M1 RNA, the catalytic RNA subunit of ribonuclease P from Escherichia coli. Proc Natl Acad Sci USA 91:5133-5137.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 5133-5137
    • Westhof, E.1    Altman, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.