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Grasses as a single genetic system: Genome composition, colinearity, and compatibility
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Bennetzen JL, Freeling M. Grasses as a single genetic system: genome composition, colinearity, and compatibility. Trends Genet. 9:1993;259-261.
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Trends Genet
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Bennetzen, J.L.1
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Havukkala IJ. Cereal genome analysis using rice as a model. Curr Opin Genet Dev. 6:1996;711-714.
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Comparative mapping in Arabidopsis and Brassica, fine scale genome colinearity and congruence of genes controlling flowering time
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Lagercrantz U, Putterill J, Coupland G, Lydiate D. Comparative mapping in Arabidopsis and Brassica, fine scale genome colinearity and congruence of genes controlling flowering time. Plant J. 9:1996;13-20.
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Lagercrantz, U.1
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0029133699
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Convergent domestication of cereal crops by independent mutations at corresponding genetic loci
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Paterson AH, Lin Y-R, Li Z, Schertz KF, Doebley JF, Pinson SRM, Liu S-C, Stansel JW, Irvine JE. Convergent domestication of cereal crops by independent mutations at corresponding genetic loci. Science. 269:1995;1714-1718.
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Paterson, A.H.1
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Microcolinearity in sh2-homologous regions of the maize, rice, and sorghum genomes
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of outstanding interest. This first detailed analysis of colinearity at the sub-centimorgan level among three grass genomes indicates that gene isolation from the larger grass genomes can be expedited, in some cases, by cross-referencing with the rice and sorghum genomes.
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Chen M, Sanmiguel P, De Oliveira AC, Woo S-S, Zhang H, Wing RA, Bennetzen JL. Microcolinearity in sh2-homologous regions of the maize, rice, and sorghum genomes. of outstanding interest Proc Natl Acad Sci USA. 97:1997;3431-3435 This first detailed analysis of colinearity at the sub-centimorgan level among three grass genomes indicates that gene isolation from the larger grass genomes can be expedited, in some cases, by cross-referencing with the rice and sorghum genomes.
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Proc Natl Acad Sci USA
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Chen, M.1
Sanmiguel, P.2
De Oliveira, A.C.3
Woo S-S4
Zhang, H.5
Wing, R.A.6
Bennetzen, J.L.7
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6
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0030482085
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Gene identification in a complex chromosomal continuum by local genomic cross-referencing
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of outstanding interest. A clear demonstration that gene identification can be facilitated within a syntenic region by relying on the DNA sequence conservation of genes when compared with divergent repetitive DNAs. This technique should be generalizable to other plant species and may also permit the identification of conserved sequences other than genes (e.g. centromeres).
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Avramova Z, Tikhonov A, Sanmiguel P, Jin Y-K, Liu C, Woo S-S, Wing RA, Bennetzen JL. Gene identification in a complex chromosomal continuum by local genomic cross-referencing. of outstanding interest Plant J. 10:1996;1163-1168 A clear demonstration that gene identification can be facilitated within a syntenic region by relying on the DNA sequence conservation of genes when compared with divergent repetitive DNAs. This technique should be generalizable to other plant species and may also permit the identification of conserved sequences other than genes (e.g. centromeres).
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Plant J
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Avramova, Z.1
Tikhonov, A.2
Sanmiguel, P.3
Jin Y-K4
Liu, C.5
Woo S-S6
Wing, R.A.7
Bennetzen, J.L.8
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7
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Toward a unified genetic map of higher plants, transcending the monocot-dicot divergence
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of outstanding interest. This compelling report of conserved gene order between Arabidopsis (a dicot) and sorghum (a monocot) indicates that genomic cross-referencing might be possible between well-characterized model plants and crop species where more agronomic traits have been mapped.
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Paterson AH, Feldmann KA, Wendel JF. Toward a unified genetic map of higher plants, transcending the monocot-dicot divergence. of outstanding interest Nat Genet. 14:1996;380-383 This compelling report of conserved gene order between Arabidopsis (a dicot) and sorghum (a monocot) indicates that genomic cross-referencing might be possible between well-characterized model plants and crop species where more agronomic traits have been mapped.
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Nat Genet
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Paterson, A.H.1
Feldmann, K.A.2
Wendel, J.F.3
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8
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A PCR-based approach for isolating pathogen resistance genes from potato with potential for wide application in plants
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Leister D, Ballvora A, Salamini F, Gebhardt C. A PCR-based approach for isolating pathogen resistance genes from potato with potential for wide application in plants. Nat Genet. 14:1996;421-429.
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Nat Genet
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Leister, D.1
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Gebhardt, C.4
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Isolation of a superfamily of candidate disease-resistance genes in soybean based on a conserved nucleotide-binding site
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Yu YG, Buss GR, Maroof MAS. Isolation of a superfamily of candidate disease-resistance genes in soybean based on a conserved nucleotide-binding site. Proc Natl Acad Sci USA. 93:1996;11751-11756.
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Yu, Y.G.1
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Maroof, M.A.S.3
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Kanazin V, Marek LF, Shoemaker RC. Resistance gene anologs are conserved and clustered in soybean. Proc Natl Acad Sci USA. 93:1996;11746-11750.
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Proc Natl Acad Sci USA
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Kanazin, V.1
Marek, L.F.2
Shoemaker, R.C.3
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11
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Map positions of 47 Arabidopsis sequences with similarity to disease resistance genes
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of outstanding interest. This comprehensive identification and mapping of many R gene homologs in Arabidopsis, (and in other species [8-10]), demonstrates the power of combining degenerate PCR and EST database searches with genetic and physical mapping. A similar strategy aplied to other gene products with conserved features (e.g. transcription factors) should greatly expedite gene identification when combined with mutant analysis.
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Botella MA, Coleman MJ, Hughes DE, Nishimura MT, Jones JDG, Somerville SC. Map positions of 47 Arabidopsis sequences with similarity to disease resistance genes. of outstanding interest Plant J. 12:1997;1197-1211 This comprehensive identification and mapping of many R gene homologs in Arabidopsis, (and in other species [8-10]), demonstrates the power of combining degenerate PCR and EST database searches with genetic and physical mapping. A similar strategy aplied to other gene products with conserved features (e.g. transcription factors) should greatly expedite gene identification when combined with mutant analysis.
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Plant J
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Botella, M.A.1
Coleman, M.J.2
Hughes, D.E.3
Nishimura, M.T.4
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Somerville, S.C.6
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Young ND. QTL mapping and quantitative disease resistance in plants. Annu Rev Phytopathol. 34:1996;479-501.
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Young, N.D.1
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Characterization of fs8.1, a major QTL influencing fruit shape in tomato
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Grandilo S, Ku H-M, Tanksley SD. Characterization of fs8.1, a major QTL influencing fruit shape in tomato. Mol Breeding. 2:1996;251-260.
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Mol Breeding
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Grandilo, S.1
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14
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0030479076
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High-resolution mapping and isolation of a yeast artificial chromosome contig containing fw2.2: A major fruit weight quantitative trait locus in tomato
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of outstanding interest. This is the first example where very high resolution mapping has made feasible the map-based cloning of an economically important QTL. The fw2.2 gene will likely be the first QTL to be molecularly characterized and its study should lead to new insights into fruit development.
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Alpert KB, Tanksley SD. High-resolution mapping and isolation of a yeast artificial chromosome contig containing fw2.2: a major fruit weight quantitative trait locus in tomato. of outstanding interest Proc Natl Acad Sci USA. 93:1996;15503-15507 This is the first example where very high resolution mapping has made feasible the map-based cloning of an economically important QTL. The fw2.2 gene will likely be the first QTL to be molecularly characterized and its study should lead to new insights into fruit development.
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(1996)
Proc Natl Acad Sci USA
, vol.93
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Alpert, K.B.1
Tanksley, S.D.2
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A genome-wide search for wild-species alleles that increase horticulture yield of processing tomatoes
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Eshed Y, Gera G, Zamir D. A genome-wide search for wild-species alleles that increase horticulture yield of processing tomatoes. Theor Appl Genet. 93:1996;877-886.
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Theor Appl Genet
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Eshed, Y.1
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Zamir, D.3
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Advanced backcross QTL analysis of tomato. I. Identification of QTL for traits for agronomic importance from Lycopersicon hirsutum
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in press
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Bernacchi D, Beck-Bunn T, Eshed Y, Lopez J, Petiard V, Uhlig J, Zamir D, Tanksley SD. Advanced backcross QTL analysis of tomato. I. Identification of QTL for traits for agronomic importance from Lycopersicon hirsutum. Theor Appl Genet. 1998;. in press.
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Theor Appl Genet
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Bernacchi, D.1
Beck-Bunn, T.2
Eshed, Y.3
Lopez, J.4
Petiard, V.5
Uhlig, J.6
Zamir, D.7
Tanksley, S.D.8
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17
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0030880972
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Seed banks and molecular maps: Unlocking genetic potential from the wild
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of outstanding interest. This excellent review article discusses inherent limitations in the current approach to utilizing exotic germplasm and presents a new paradigm for molecular breeding based on QTL mapping. The advanced backcross QTL mapping method will have a major impact on germplasm utilization for plant breeding and gene isolation.
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Tanksley SD, McCouch SR. Seed banks and molecular maps: unlocking genetic potential from the wild. of outstanding interest Science. 277:1997;1063-1066 This excellent review article discusses inherent limitations in the current approach to utilizing exotic germplasm and presents a new paradigm for molecular breeding based on QTL mapping. The advanced backcross QTL mapping method will have a major impact on germplasm utilization for plant breeding and gene isolation.
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Science
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Tanksley, S.D.1
McCouch, S.R.2
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Chromosome landing: A new paradigm for map-based cloning in species with large genomes
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Tanksley SD, Ganal MW, Martin GB. Chromosome landing: a new paradigm for map-based cloning in species with large genomes. Trends Genet. 11:1995;63-68.
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Trends Genet
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Tanksley, S.D.1
Ganal, M.W.2
Martin, G.B.3
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19
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The Arabidopsis NPR1 gene that controls systemic acquired resistance encodes a novel protein containing ankyrin repeats
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Cao H, Glazebrook J, Clarke JD, Volko S, Dong X. The Arabidopsis NPR1 gene that controls systemic acquired resistance encodes a novel protein containing ankyrin repeats. Cell. 88:1997;57-63.
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Cell
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Cao, H.1
Glazebrook, J.2
Clarke, J.D.3
Volko, S.4
Dong, X.5
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20
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14444268507
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Positional cloning of a gene for nematode resistance in sugar beet
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Cai D, Kleine M, Kiflr S, Harloff H-J, Sandal NN, Marcker KA, Klein-Lankhorst RM, Salentijn EM, Lange W, Stiekema WJ, et al. Positional cloning of a gene for nematode resistance in sugar beet. Science. 275:1997;832-834.
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Science
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Cai, D.1
Kleine, M.2
Kiflr, S.3
Harloff H-J4
Sandal, N.N.5
Marcker, K.A.6
Klein-Lankhorst, R.M.7
Salentijn, E.M.8
Lange, W.9
Stiekema, W.J.10
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21
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0030612658
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The l2C family from the wilt disease resistance locus l2 belongs to the nucleotide binding leucine-rich repeat superfamily of plant resistance genes
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Ori N, Eshed Y, Paran I, Preseting G, Aviv D, Tanksley SD, Zamir D, Fluhr R. The l2C family from the wilt disease resistance locus l2 belongs to the nucleotide binding leucine-rich repeat superfamily of plant resistance genes. Plant Cell. 9:1997;521-532.
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Plant Cell
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Ori, N.1
Eshed, Y.2
Paran, I.3
Preseting, G.4
Aviv, D.5
Tanksley, S.D.6
Zamir, D.7
Fluhr, R.8
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22
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0041095589
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The barely Mlo gene: A novel control element of plant pathogen resistance
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of outstanding interest. This is an especially elegant example of map-based cloning and subsequent verification of an important R gene from a plant species with a genome almost twice the size of the human genome.
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Buschges R, Hollricher K, Panstruga R, Simons G, Wolter M, Frijters A, van Daelen R, van der Lee T, Diergaarde P, Groenendijk J, et al. The barely Mlo gene: a novel control element of plant pathogen resistance. of outstanding interest Cell. 88:1997;695-705 This is an especially elegant example of map-based cloning and subsequent verification of an important R gene from a plant species with a genome almost twice the size of the human genome.
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Cell
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Buschges, R.1
Hollricher, K.2
Panstruga, R.3
Simons, G.4
Wolter, M.5
Frijters, A.6
Van Daelen, R.7
Van Der Lee, T.8
Diergaarde, P.9
Groenendijk, J.10
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23
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AFLP: A new concept for DNA fingerprinting
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Vos P, Hogers R, Bleeker M, Reijans M, Van de Lee T, Hornes M, Frijters A, Pot J, Peleman J, Kuiper M, Zabeau M. AFLP: a new concept for DNA fingerprinting. Nucleic Acids Res. 23:1995;4407-4414.
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Vos, P.1
Hogers, R.2
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Hornes, M.6
Frijters, A.7
Pot, J.8
Peleman, J.9
Kuiper, M.10
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Simple sequence repeats for germplasm analysis and mapping in maize
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Taramino G, Tingey S. Simple sequence repeats for germplasm analysis and mapping in maize. Genome. 39:1996;277-287.
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Genome
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Taramino, G.1
Tingey, S.2
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Assessment of genetic diversity in dent and popcorn (Zea mays L.) inbred lines using inter-simple sequence repeat (ISSR) amplification.
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Kantety RV, Zeng X, Bennetzen JL, Zehr BE. Assessment of genetic diversity in dent and popcorn (Zea mays L.) inbred lines using inter-simple sequence repeat (ISSR) amplification. Mol Breeding. 1:1995;365-373.
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Kantety, R.V.1
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Zehr, B.E.4
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High-resolution genetical and physical mapping of the Rx gene for extreme resistance to potato virus X in tetraploid potato
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Bendahmane A, Kanyuka K, Baulcombe DC. High-resolution genetical and physical mapping of the Rx gene for extreme resistance to potato virus X in tetraploid potato. Theor Appl Genet. 95:1997;153-162.
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Theor Appl Genet
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Saturation mapping with subclones of YACs: DNA marker production targeting the rice blast disease resistance gene, Pi-b
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Monna L, Miyao A, Zhong HS, Yano M, Iwamoto M, Umehara Y, Kurata N, Hayasaka H, Sasaki T. Saturation mapping with subclones of YACs: DNA marker production targeting the rice blast disease resistance gene, Pi-b. Theor Appl Genet. 94:1997;170-176.
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Monna, L.1
Miyao, A.2
Zhong, H.S.3
Yano, M.4
Iwamoto, M.5
Umehara, Y.6
Kurata, N.7
Hayasaka, H.8
Sasaki, T.9
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28
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Construction of an 800-kb contig in the near-centomeric region of the rice blast resistance gene Pi-ta2 using a highly representative rice BAC library
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Nakamura S, Asakawa S, Ohmido N, Fukui K, Shimizu N, Kawasaki S. Construction of an 800-kb contig in the near-centomeric region of the rice blast resistance gene Pi-ta2 using a highly representative rice BAC library. Mol Gen Genet. 254:1997;611-620.
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Somerville C. The physical map of an Arabidopsis chromosome. Trends Plant Sci. 1:1996;3.
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Construction and characterization of two rice bacterial artificial chromosome libraries from the parents of a permanent recombinant inbred mapping population
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Zhang HB, Choi SD, Woo SS, Li ZK, Wing RA. Construction and characterization of two rice bacterial artificial chromosome libraries from the parents of a permanent recombinant inbred mapping population. Mol Breeding. 2:1996;11-24.
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Mol Breeding
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Zhang, H.B.1
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Woo, S.S.3
Li, Z.K.4
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The construction of bacterial artificial chromosome (BAC) libraries
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S. Gelvin, Schilperoot R. Dordrecht: Kluwer Academic Publishers. in press
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Choi S, Wing RA. The construction of bacterial artificial chromosome (BAC) libraries. Gelvin S, Schilperoot R. Plant Molecular Biology Manual. 1998;Kluwer Academic Publishers, Dordrecht. in press.
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Plant Molecular Biology Manual
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Choi, S.1
Wing, R.A.2
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32
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0030731043
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A binary-BAC system for plant transformation with high-molecular-weight DNA
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of special interest. Direct transformation of BAC clones using this novel vector system will expedite map-based cloning in plant species that are readily transformed by Agrobacterium.
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Hamilton CM. A binary-BAC system for plant transformation with high-molecular-weight DNA. of special interest Gene. 200:1997;107-116 Direct transformation of BAC clones using this novel vector system will expedite map-based cloning in plant species that are readily transformed by Agrobacterium.
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Gene
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Hamilton, C.M.1
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Retrofitting YACs for direct DNA transfer into plant cells
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of special interest. Addition of plant selectable markers to the arms of YAC clones spanning a target locus allows direct transformation into plant cells and increases the usefulness of many plant YAC libraries.
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Adam G, Mullen JA, Kindle K. Retrofitting YACs for direct DNA transfer into plant cells. of special interest Plant J. 11:1997;1349-1358 Addition of plant selectable markers to the arms of YAC clones spanning a target locus allows direct transformation into plant cells and increases the usefulness of many plant YAC libraries.
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Plant J
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Adam, G.1
Mullen, J.A.2
Kindle, K.3
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Century KS, Shapiro AD, Repeti PP, Dahlbeck D, Holub E, Staskawicz BJ. NDR1, a pathogen-induced component required for Arabidopsis disease resistance. Science. 278:1997;1963-1965.
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Science
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Century, K.S.1
Shapiro, A.D.2
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Dahlbeck, D.4
Holub, E.5
Staskawicz, B.J.6
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35
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0031214156
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Rapid construction of a transcription map for a cosmid contig of Arabidopsis thaliana genome using a novel cDNA selection method
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of outstanding interest. This refinement of earlier cDNA selection methods provides a powerful approach to quickly identify transcribed regions within a target region to expedite map-based cloning.
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Seki M, Hayashida N, Kato N, Yohda M, Shinozaki K. Rapid construction of a transcription map for a cosmid contig of Arabidopsis thaliana genome using a novel cDNA selection method. of outstanding interest Plant J. 12:1997;481-487 This refinement of earlier cDNA selection methods provides a powerful approach to quickly identify transcribed regions within a target region to expedite map-based cloning.
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Plant J
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Seki, M.1
Hayashida, N.2
Kato, N.3
Yohda, M.4
Shinozaki, K.5
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A novel suppressor of cell death in plants encoded by the Lis1 gene of maize
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Gray J, Close PS, Briggs SP, Johal GS. A novel suppressor of cell death in plants encoded by the Lis1 gene of maize. Cell. 89:1997;25-31.
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Cell
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Gray, J.1
Close, P.S.2
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Johal, G.S.4
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Use of Ac as an insertional mutagen in Arabidopsis
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Bhatt AM, Page T, Lawson EJR, Lister C, Dean C. Use of Ac as an insertional mutagen in Arabidopsis. Plant J. 9:1996;935-945.
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Plant J
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Bhatt, A.M.1
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Cooley MB, Goldsbrough AP, Still DW, Yoder JI. Site-selected insertional mutagenesis of tomato with maize Ac and Ds elements. Mol Gen Genet. 252:1996;184-194.
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Mol Gen Genet
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Cooley, M.B.1
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of special interest. An excellent review of T-DNA tagging for gene cloning that also presents a multiplex approach for reverse genetics.
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Azpiroz-Leehan R, Feldmann KA. T-DNA insertion mutagenesis in Arabidopsis - going back and forth. of special interest Trends Genet. 13:1997;152-156 An excellent review of T-DNA tagging for gene cloning that also presents a multiplex approach for reverse genetics.
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Trends Genet
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Feldmann, K.A.2
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40
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A general method for gene isolation in tagging approaches: Amplification of insertion mutagenized sites (AIMS)
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A novel approach to identify transposon or T-DNA tagged genes that utilizes AFLP-based technology to simplify the identification of DNA fragments which co-segregate with the mutant allele. Will be especially useful in maize but also in other systems where high copy number of transposons obscures co-segregation analysis. of special interest
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Frey M, Stettner C, Gierl A. A general method for gene isolation in tagging approaches: amplification of insertion mutagenized sites (AIMS). of special interest Plant J. 1998; A novel approach to identify transposon or T-DNA tagged genes that utilizes AFLP-based technology to simplify the identification of DNA fragments which co-segregate with the mutant allele. Will be especially useful in maize but also in other systems where high copy number of transposons obscures co-segregation analysis.
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(1998)
Plant J
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Frey, M.1
Stettner, C.2
Gierl, A.3
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41
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0030268328
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Characterization and mapping of Ds-GUS-T-DNA lines for targeted insertional mutagenesis
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Smith D, Yanai Y, Liu Y-G, Ishiguro S, Okada K, Shibita D, Whittier RF, Fedoroff NV. Characterization and mapping of Ds-GUS-T-DNA lines for targeted insertional mutagenesis. Plant J. 10:1996;721-732.
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Plant J
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Smith, D.1
Yanai, Y.2
Liu Y-G3
Ishiguro, S.4
Okada, K.5
Shibita, D.6
Whittier, R.F.7
Fedoroff, N.V.8
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42
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0031148746
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Increased Ac excision (iae): Arabidopsis thaliana mutations affecting Ac transposition
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Jarvis P, Belzile F, Pages T, Dean C. Increased Ac excision (iae): Arabidopsis thaliana mutations affecting Ac transposition. Plant J. 11:1997;907-919.
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Plant J
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Jarvis, P.1
Belzile, F.2
Pages, T.3
Dean, C.4
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43
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0030774282
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Efficient gene tagging in Arabidopsis thaliana using a gene trap approach
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of special interest. A T-DNA carrying a kanamycin resistance gene was constructed that generates a translational fusion when it integrates into a plant gene. This system increase the recovery of plants with T-DNA-tagged genes and is applicable to other plant species.
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Babiychuk E, Fuanghthong M, Van Montagu M, Inze D, Kushnir S. Efficient gene tagging in Arabidopsis thaliana using a gene trap approach. of special interest Proc Natl Acad Sci USA. 94:1997;12722-12727 A T-DNA carrying a kanamycin resistance gene was constructed that generates a translational fusion when it integrates into a plant gene. This system increase the recovery of plants with T-DNA-tagged genes and is applicable to other plant species.
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(1997)
Proc Natl Acad Sci USA
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Babiychuk, E.1
Fuanghthong, M.2
Van Montagu, M.3
Inze, D.4
Kushnir, S.5
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44
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0031238581
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Retrotransposons of rice: Their regulation and use for genome analysis
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Hirochika H. Retrotransposons of rice: their regulation and use for genome analysis. Plant Mol Biol. 35:1997;231-240.
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Plant Mol Biol
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Hirochika, H.1
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45
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0030272124
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Genetic and biochemical probes for protein - Protein interactions
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Mcnabb DS, Guarente L. Genetic and biochemical probes for protein - protein interactions. Curr Opin Biotechnol. 7:1996;557-559.
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Curr Opin Biotechnol
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McNabb, D.S.1
Guarente, L.2
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46
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0028124463
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The two-hybrid system: An assay for protein - Protein interactions
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Fields S, Sternglanz R. The two-hybrid system: an assay for protein - protein interactions. Trends Genet. 10:1994;286-292.
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Trends Genet
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Fields, S.1
Sternglanz, R.2
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47
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0030448263
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Initiation of plant disease resistance by physical interaction of AvrPto and the Pto kinase
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Tang X, Frederick RD, Zhou J, Halterman DA, Jia Y, Martin GB. Initiation of plant disease resistance by physical interaction of AvrPto and the Pto kinase. Science. 274:1996;2060-2063.
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Science
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Tang, X.1
Frederick, R.D.2
Zhou, J.3
Halterman, D.A.4
Jia, Y.5
Martin, G.B.6
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48
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0030475465
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Molecular basis of gene-for-gene specificity in bacterial speck disease of tomato
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Scofield SR, Tobias CM, Rathjen JP, Chang JH, Lavelle DT, Michelmore RW, Staskawicz BJ. Molecular basis of gene-for-gene specificity in bacterial speck disease of tomato. Science. 274:1996;2063-2065.
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Science
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Scofield, S.R.1
Tobias, C.M.2
Rathjen, J.P.3
Chang, J.H.4
Lavelle, D.T.5
Michelmore, R.W.6
Staskawicz, B.J.7
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49
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0029560869
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The tomato gene Pti1 encodes a serine/threonine kinase that is phosphorylated by Pto and is involved in the hypersensitive response
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Zhou J, Loh Y-T, Bressan RA, Martin GB. The tomato gene Pti1 encodes a serine/threonine kinase that is phosphorylated by Pto and is involved in the hypersensitive response. Cell. 83:1995;925-935.
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Cell
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Zhou, J.1
Loh Y-T2
Bressan, R.A.3
Martin, G.B.4
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50
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0030973457
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The Pto kinase conferring resistance to tomato bacterial speck disease interacts with proteins that bind a cis-element of pathogenesis-related genes
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of special interest. This paper and that of Zhou 1995 [49] are early reports of using the yeast two-hybrid system to isolate genes involved in plant signal transduction and defense responses.
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Zhou J, Tang X, Martin GB. The Pto kinase conferring resistance to tomato bacterial speck disease interacts with proteins that bind a cis-element of pathogenesis-related genes. of special interest EMBO J. 16:1997;3207-3218 This paper and that of Zhou 1995 [49] are early reports of using the yeast two-hybrid system to isolate genes involved in plant signal transduction and defense responses.
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(1997)
EMBO J
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, pp. 3207-3218
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Zhou, J.1
Tang, X.2
Martin, G.B.3
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51
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0030839266
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The Arabidopsis Cks1At protein binds the cyclin-dependent kinases Cd2aAt and Cdc2bAt
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De Veylder L, Segers G, Glab N, Casteels P, Van Montagu M, Inze D. The Arabidopsis Cks1At protein binds the cyclin-dependent kinases Cd2aAt and Cdc2bAt. FEBS Lett. 412:1997;446-452.
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(1997)
FEBS Lett
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, pp. 446-452
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De Veylder, L.1
Segers, G.2
Glab, N.3
Casteels, P.4
Van Montagu, M.5
Inze, D.6
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52
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0031170798
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Characterization and expression of a rice RAD23 gene
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Schultz TF, Quatrano RS. Characterization and expression of a rice RAD23 gene. Plant Mol Biol. 34:1997;557-562.
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(1997)
Plant Mol Biol
, vol.34
, pp. 557-562
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Schultz, T.F.1
Quatrano, R.S.2
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53
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0030924125
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CP12 provides a new mode of light regulation of Calvin cycle activity in higher plants
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Wedel N, Soll J, Paap B. CP12 provides a new mode of light regulation of Calvin cycle activity in higher plants. Proc Natl Acad Sci USA. 94:1997;10479-10484.
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(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 10479-10484
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Wedel, N.1
Soll, J.2
Paap, B.3
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54
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0031570363
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Dampening of bait proteins in the two-hybrid system
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Cormack RS, Somssich IE. Dampening of bait proteins in the two-hybrid system. Anal Biochem. 248:1997;184-186.
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(1997)
Anal Biochem
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Cormack, R.S.1
Somssich, I.E.2
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55
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0030923133
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Isolation of an Ap-1 repressor by a novel method for detecting protein - Protein interactions
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of special interest. This new genetic screening system detects protein - protein interactions in the yeast cytoplasm rather than relying on transcription of reporter genes. It should provide a useful alternative for bait proteins that are troublesome in the standard two-hybrid system.
-
Aronheim A, Zandi E, Hennemann H, Elledge SJ, Karin M. Isolation of an Ap-1 repressor by a novel method for detecting protein - protein interactions. of special interest Mol Cell Biol. 17:1997;3094-3102 This new genetic screening system detects protein - protein interactions in the yeast cytoplasm rather than relying on transcription of reporter genes. It should provide a useful alternative for bait proteins that are troublesome in the standard two-hybrid system.
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(1997)
Mol Cell Biol
, vol.17
, pp. 3094-3102
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Aronheim, A.1
Zandi, E.2
Hennemann, H.3
Elledge, S.J.4
Karin, M.5
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56
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0030738524
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Monitoring protein - Protein interactions in intact eukaryotic cells by β-glacatosidase complementation
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Rossi F, Charlton CA, Blau HM. Monitoring protein - protein interactions in intact eukaryotic cells by β-glacatosidase complementation. Proc Natl Acad Sci USA. 94:1997;8405-8410.
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(1997)
Proc Natl Acad Sci USA
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, pp. 8405-8410
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Rossi, F.1
Charlton, C.A.2
Blau, H.M.3
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57
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0031040787
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The Arabidopsis thaliana cDNA sequencing projects
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Delseny M, Cooke R, Raynal M, Grellet F. The Arabidopsis thaliana cDNA sequencing projects. FEBS Lett. 403:1997;221-224.
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(1997)
FEBS Lett
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, pp. 221-224
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Delseny, M.1
Cooke, R.2
Raynal, M.3
Grellet, F.4
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58
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0031127749
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Plant biology in the post-Gutenberg era
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of outstanding interest. A comprehensive and very clear introduction to the vast amount of information on plant biology available on the World Wide Web. Web sites covering all aspects of plant biology from taxonomy to DNA sequence databases are discussed making this a useful guide which saves much random browsing time.
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Somerville C, Flanders D, Cherry JM. Plant biology in the post-Gutenberg era. of outstanding interest Plant Physiol. 113:1997;1015-1022 A comprehensive and very clear introduction to the vast amount of information on plant biology available on the World Wide Web. Web sites covering all aspects of plant biology from taxonomy to DNA sequence databases are discussed making this a useful guide which saves much random browsing time.
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(1997)
Plant Physiol
, vol.113
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Somerville, C.1
Flanders, D.2
Cherry, J.M.3
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59
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0030993043
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Cellulose synthesis: Cloning in silico
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Cutler S, Somerville C. Cellulose synthesis: cloning in silico. Curr Biol. 7:1997;108-111.
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(1997)
Curr Biol
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Cutler, S.1
Somerville, C.2
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60
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0030296158
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The construction of Arabidopsis expressed sequence tag assemblies
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of special interest. Redundant ESTS in the Arabidopsis database were grouped using computer programs optimized on the human EST collection to develop a minimal set of cDNA contigs. This approach will prove generally useful for all plant EST projects and will facilitate the development of cDNA microarray chips.
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Rounsley SD, Glodek A, Sutton G, Adams MD, Somerville CR, Venter JG, Kerlavage AR. The construction of Arabidopsis expressed sequence tag assemblies. of special interest Plant Physiol. 112:1996;1177-1183 Redundant ESTS in the Arabidopsis database were grouped using computer programs optimized on the human EST collection to develop a minimal set of cDNA contigs. This approach will prove generally useful for all plant EST projects and will facilitate the development of cDNA microarray chips.
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(1996)
Plant Physiol
, vol.112
, pp. 1177-1183
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Rounsley, S.D.1
Glodek, A.2
Sutton, G.3
Adams, M.D.4
Somerville, C.R.5
Venter, J.G.6
Kerlavage, A.R.7
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Genome analysis with gene expression microarrays
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Schena M. Genome analysis with gene expression microarrays. Bioessays. 18:1996;427-431.
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Parallel human genome analysis: Microarray-based expression monitoring of 1000 genes
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Schena M, Shalon D, Heller R, Chai A, Brown PO, Davis RW. Parallel human genome analysis: microarray-based expression monitoring of 1000 genes. Proc Natl Acad Sci USA. 93:1996;10614-10619.
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Proc Natl Acad Sci USA
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Schena, M.1
Shalon, D.2
Heller, R.3
Chai, A.4
Brown, P.O.5
Davis, R.W.6
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63
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0030669030
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Exploring the metabolic and genetic control of gene expression on a genomic scale
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of outstanding interest. This paper and Zhang [64] have used the same experimental method to analyze gene expression. They both provide excellent examples of the tremendous potential for genome-wide expression analysis. In both papers, large numbers of genes were shown to be differently expressed as a result of environmental stimuli or specific mutations in the cell lines. Application of these approaches to plants should be straightforward and will provide unprecedented insight into the molecular basis of economically important traits.
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Derisi JL, Iyer VR, Brown PO. Exploring the metabolic and genetic control of gene expression on a genomic scale. of outstanding interest Science. 278:1997;680-686 This paper and Zhang [64] have used the same experimental method to analyze gene expression. They both provide excellent examples of the tremendous potential for genome-wide expression analysis. In both papers, large numbers of genes were shown to be differently expressed as a result of environmental stimuli or specific mutations in the cell lines. Application of these approaches to plants should be straightforward and will provide unprecedented insight into the molecular basis of economically important traits.
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(1997)
Science
, vol.278
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Derisi, J.L.1
Iyer, V.R.2
Brown, P.O.3
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64
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0030962307
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Gene expression profiles in normal and cancer cells
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of outstanding interest. This report and Derisi [63] are excellent examples of the tremendous potential for genome-wide expression analysis. In both papers, large numbers of genes were shown to be differentially expressed as a result of environmental stimuli or specific mutations in the cell lines. Application of these approaches to plants should be straightforward and will provide unprecedented insight into the molecular basis of economically important traits.
-
Zhang L, Zhou W, Velculescu VE, Kem SE, Hruban RH, Hamilton SR, Vogelstein B, Kinzler KW. Gene expression profiles in normal and cancer cells. of outstanding interest Science. 276:1997;1268-1272 This report and Derisi [63] are excellent examples of the tremendous potential for genome-wide expression analysis. In both papers, large numbers of genes were shown to be differentially expressed as a result of environmental stimuli or specific mutations in the cell lines. Application of these approaches to plants should be straightforward and will provide unprecedented insight into the molecular basis of economically important traits.
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(1997)
Science
, vol.276
, pp. 1268-1272
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Zhang, L.1
Zhou, W.2
Velculescu, V.E.3
Kem, S.E.4
Hruban, R.H.5
Hamilton, S.R.6
Vogelstein, B.7
Kinzler, K.W.8
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