Proteomics of endoplasmic reticulum-golgi intermediate compartment (ERGIC) membranes from brefeldin A-treated HepG2 cells identifies ERGIC-32, a new cycling protein that interacts with human Erv46

Journal of Biological Chemistry

Volumn 279, Issue 45, 2004, Pages 47242-47253

  Breuza, Lionel ^a   Halbeisen, Regula ^a   Jenö, Paul ^a   Otte, Stefan ^b,d   Barlowe, Charles ^b   Hong, Wanjin ^c   Hauri, Hans Peter ^a  

^a UNIVERSITY OF BASEL   (Switzerland)

^b DARTMOUTH MEDICAL SCHOOL   (United States)

^c INSTITUTE OF MOLECULAR AND CELL BIOLOGY   (Singapore)

^d UNIVERSITY OF ILLINOIS AT CHICAGO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MEMBRANES; CELLS; MASS SPECTROMETRY; RNA; YEAST;

ENDOPLASMIC RETICULUM (ER); GOLGI; MEMBRANE TRAFFIC;

PROTEINS;

BREFELDIN A; ENDOPLASMIC RETICULUM GOLGI INTERMEDIATE COMPARTMENT PROTEIN 32; MEMBRANE PROTEIN; PROTEIN; PROTEIN ERV 46; SMALL INTERFERING RNA; UNCLASSIFIED DRUG;

ARTICLE; CONTROLLED STUDY; CROSS LINKING; ENDOPLASMIC RETICULUM; GOLGI COMPLEX; HEP 2 CELL; HUMAN; HUMAN CELL; MASS SPECTROMETRY; MEMBRANE TRANSPORT; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN FOLDING; PROTEIN INTERACTION; PROTEIN LOCALIZATION; PROTEIN METABOLISM; PROTEIN PROCESSING; PROTEIN PURIFICATION; PROTEIN TARGETING; PROTEOMICS; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; ANIMALS; BREFELDIN A; CARRIER PROTEINS; CELL LINE; CELL MEMBRANE; CROSS-LINKING REAGENTS; CYTOPLASM; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ENDOPLASMIC RETICULUM; GOLGI APPARATUS; HELA CELLS; HUMANS; IMMUNOBLOTTING; IMMUNOPRECIPITATION; MASS SPECTROMETRY; MEMBRANE PROTEINS; MICE; MICROSCOPY, FLUORESCENCE; MODELS, BIOLOGICAL; MOLECULAR SEQUENCE DATA; PHYLOGENY; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; PROTEOME; RNA INTERFERENCE; SACCHAROMYCES CEREVISIAE PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; SUBCELLULAR FRACTIONS; VESICULAR TRANSPORT PROTEINS;

EID: 8744259809     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M406644200     Document Type: Article

References (84)

1. Hauri, H. P., Kappeler, F., Andersson, H., and Appenzeller, C. (2000) J. Cell Sci. 113, 587-596
2. Hammond, A. T., and Glick, B. S. (2000) Mol. Biol. Cell 11, 3013-3030
3. Stephens, D. J., Lin-Marq, N., Pagano, A., Pepperkok, R., and Paccaud, J. P. (2000) J. Cell Sci. 113, 2177-2185
4. Schweizer, A., Matter, K., Ketcham, C. M., and Hauri, H. P. (1991) J. Cell Biol. 113, 45-54
5. Schweizer, A., Fransen, J. A., Bachi, T., Ginsel, L., and Hauri, H. P. (1988) J. Cell Biol. 107, 1643-1653
6. Lahtinen, U., Hellman, U., Wernstedt, C., Saraste, J., and Pettersson, R. F. (1996) J. Biol. Chem. 271, 4031-4037
7. Klumperman, J., Schweizer, A., Clausen, H., Tang, B. L., Hong, W., Oorschot, V., and Hauri, H. P. (1998) J. Cell Sci. 111, 3411-3425
8. Vollenweider, F., Kappeler, F., Itin, C., and Hauri, H. P. (1998) J. Cell Biol. 142, 377-389
9. Appenzeller, C., Andersson, H., Kappeler, F., and Hauri, H. P. (1999) Nat. Cell Biol. 1, 330-334
10. Nichols, W. C., Seligsohn, U., Zivelin, A., Terry, V. H., Hertel, C. E., Wheatley, M. A., Moussalli, M. J., Hauri, H. P., Ciavarella, N., Kaufman, R. J., and Ginsburg, D. (1998) Cell 93, 61-70
11. Tang, B. L., Wong, S. H., Qi, X. L., Low, S. H., and Hong, W. (1993) J. Cell Biol. 120, 325-328
12. Rojo, M., Pepperkok, R., Emery, G., Kellner, R., Stang, E., Parton, R. G., and Gruenberg, J. (1997) J. Cell Biol. 139, 1119-1135
13. Blum, R., Pfeiffer, F., Feick, P., Nastainczyk, W., Kohler, B., Schafer, K. H., and Schulz, I. (1999) J. Cell Sci. 112, 537-548
14. Jenne, N., Frey, K., Brugger, B., and Wieland, F. T. (2002) J. Biol. Chem. 277, 46504-46511
15. Hui, N., Nakamura, N., Sonnichsen, B., Shima, D. T., Nilsson, T., and Warren, G. (1997) Mol. Biol. Cell 8, 1777-1787
16. Rowe, T., Dascher, C., Bannykh, S., Plutner, H., and Balch, W. E. (1998) Science 279, 696-700
17. Zhang, T., Wong, S. H., Tang, B. L., Xu, Y., Peter, F., Subramaniam, V. N., and Hong, W. (1997) J. Cell Biol. 139, 1157-1168
18. Zhang, T., Wong, S. H., Tang, B. L., Xu, Y., and Hong, W. (1999) Mol. Biol. Cell 10, 435-453
19. Hatsuzawa, K., Hirose, H., Tani, K., Yamamoto, A., Scheller, R. H., and Tagaya, M. (2000) J. Biol. Chem. 275, 13713-13720
20. Tisdale, E. J., Bourne, J. R., Khosravi-Far, R., Der, C. J., and Balch, W. E. (1992) J. Cell Biol. 119, 749-761
21. Griffiths, G., Ericsson, M., Krijnse-Locker, J., Nilsson, T., Goud, B., Soling, H. D., Tang, B. L., Wong, S. H., and Hong, W. (1994) J. Cell Biol. 127, 1557-1574
22. Saraste, J., Lahtinen, U., and Goud, B. (1995) J. Cell Sci. 108, 1541-1552
23. Ellgaard, L., and Helenius, A. (2003) Nat. Rev. Mol. Cell. Biol. 4, 181-191
24. Hammond, C., and Helenius, A. (1994) J. Cell Biol. 126, 41-52
25. Spiro, M. J., and Spiro, R. G. (2001) Glycobiology 11, 803-811
26. Yamamoto, K., Fujii, R., Toyofuku, Y., Saito, T., Koseki, H., Hsu, V. W., and Aoe, T. (2001) EMBO J. 20, 3082-3091
27. Mezzacasa, A., and Helenius, A. (2002) Traffic 3, 833-849
28. Raposo, G., van Santen, H. M., Leijendekker, R., Geuze, H. J., and Ploegh, H. L. (1995) J. Cell Biol. 131, 1403-1419
29. Chardin, P., and McCormick, F. (1999) Cell 97, 153-155
30. Jackson, C. L., and Casanova, J. E. (2000) Trends Cell Biol. 10, 60-67
31. Klausner, R. D., Donaldson, J. G., and Lippincott-Schwartz, J. (1992) J. Cell Biol. 116, 1071-1080
32. Lippincott-Schwartz, J., Donaldson, J. G., Schweizer, A., Berger, E. G., Hauri, H. P., Yuan, L. C., and Klausner, R. D. (1990) Cell 60, 821-836
33. Sciaky, N., Presley, J., Smith, C., Zaal, K. J., Cole, N., Moreira, J. E., Terasaki, M., Siggia, E., and Lippincott-Schwartz, J. (1997) J. Cell Biol. 139, 1137-1155
34. Fullekrug, J., Sonnichsen, B., Schafer, U., Nguyen Van, P., Soling, H. D., and Mieskes, G. (1997) FEBS Lett. 404, 75-81
35. Tang, B. L., Low, S. H., and Hong, W. (1995) Eur. J. Cell Biol. 68, 199-205
36. Fullekrug, J., Suganuma, T., Tang, B. L., Hong, W., Storrie, B., and Nilsson, T. (1999) Mol. Biol. Cell 10, 1939-1955
37. Chen, J. W., Pan, W., D'Souza, M. P., and August, J. T. (1985) Arch. Biochem. Biophys. 239, 574-586
38. Schweizer, A., Ericsson, M., Bachi, T., Griffiths, G., and Hauri, H. P. (1993) J. Cell Sci. 104, 671-683
39. Linstedt, A. D., and Hauri, H. P. (1993) Mol. Biol. Cell 4, 679-693
40. Linstedt, A. D., Mehta, A., Suhan, J., Reggio, H., and Hauri, H. P. (1997) Mol. Biol. Cell 8, 1073-1087
41. Orci, L., Ravazzola, M., Mack, G. J., Barlowe, C., and Otte, S. (2003) Proc. Natl. Acad. Sci. U. S. A. 100, 4586-4591
42. Prescott, A. R., Lucocq, J. M., James, J., Lister, J. M., and Ponnambalam, S. (1997) Eur. J. Cell Biol. 72, 238-246
43. Majoul, I., Sohn, K., Wieland, F. T., Pepperkok, R., Pizza, M., Hillemann, J., and Soling, H. D. (1998) J. Cell Biol. 143, 601-612
44. Shugrue, C. A., Kolen, E. R., Peters, H., Czernik, A., Kaiser, C., Matovcik, L., Hubbard, A. L., and Gorelick, F. (1999) J. Cell Sci. 112, 4547-4556
45. Balch, W. E., and Rothman, J. E. (1985) Arch. Biochem. Biophys. 240, 413-425
46. Shevchenko, A., Wilm, M., Vorm, O., and Mann, M. (1996) Anal. Chem. 68, 850-858
47. Hirosawa, M., Nagase, T., Ishikawa, K., Kikuno, R., Nomura, N., and Ohara, O. (1999) DNA Res. 6, 329-336
48. Schindler, R., Itin, C., Zerial, M., Lottspeich, F., and Hauri, H. P. (1993) Eur. J. Cell Biol. 61, 1-9
49. Kappeler, F., Klopfenstein, D. R., Foguet, M., Paccaud, J. P., and Hauri, H. P. (1997) J. Biol. Chem. 272, 31801-31808
50. Santoni, V., Molloy, M., and Rabilloud, T. (2000) Electrophoresis 21, 1054-1070
51. Fiedler, K., Parton, R. G., Kellner, R., Etzold, T., and Simons, K. (1994) EMBO J. 13, 1729-1740
52. Fiedler, K., and Simons, K. (1994) Cell 77, 625-626
53. Fullekrug, J., Scheiffele, P., and Simons, K. (1999) J. Cell Sci. 112, 2813-2821
54. Hara-Kuge, S., Ohkura, T., Ideo, H., Shimada, O., Atsumi, S., and Yamashita, K. (2002) J. Biol. Chem. 277, 16332-16339
55. Muniz, M., Nuoffer, C., Hauri, H. P., and Riezman, H. (2000) J. Cell Biol. 148, 925-930
56. Fiedler, K., Veit, M., Stamnes, M. A., and Rothman, J. E. (1996) Science 273, 1396-1399
57. Dominguez, M., Dejgaard, K., Fullekrug, J., Dahan, S., Fazel, A., Paccaud, J. P., Thomas, D. Y., Bergeron, J. J., and Nilsson, T. (1998) J. Cell Biol. 140, 751-765
58. Nickel, W., Brugger, B., and Wieland, F. T. (2002) J. Cell Sci. 115, 3235-3240
59. Alvarez, C., Garcia-Mata, R., Hauri, H. P., and Sztul, E. (2001) J. Biol. Chem. 276, 2693-2700
60. Shorter, J., Beard, M. B., Seemann, J., Dirac-Svejstrup, A. B., and Warren, G. (2002) J. Cell Biol. 157, 45-62
61. Seemann, J., Jokitalo, E., Pypaert, M., and Warren, G. (2000) Nature 407, 1022-1026
62. Pelham, H. R. (1988) EMBO J. 7, 913-918
63. Bieberich, E., Treml, K., Volker, C., Rolfs, A., Kalz-Fuller, B., and Bause, E. (1997) Eur. J. Biochem, 246, 681-689
64. Satoh, M., Hirayoshi, K., Yokota, S., Hosokawa, N., and Nagata, K. (1996) J. Cell Biol. 133, 469-483
65. Lin, P., Le-Niculescu, H., Hofmeister, R., McCaffery, J. M., Jin, M., Hennemann, H., McQuistan, T., De Vries, L., and Farquhar, M. G. (1998) J. Cell Biol. 141, 1515-1527
66. Otte, S., Beiden, W. J., Heidtman, M., Liu, J., Jensen, O. N., and Barlowe, C. (2001) J. Cell Biol. 152, 503-518
67. Duhig, T., Ruhrberg, C., Mor, O., and Fried, M. (1998) Genomics 52, 72-78
68. Belden, W. J., and Barlowe, C. (2001) Science 294, 1528-1531
69. Reeves, J. E., and Fried, M. (1995) Mol. Membr. Biol. 12, 201-208
70. Singer, S. J. (1990) Annu. Rev. Cell Biol. 6, 247-296
71. Bu, G., Geuze, H. J., Strous, G. J., and Schwartz, A. L. (1995) EMBO J. 14, 2269-2280
72. Subramaniam, V. N., Krijnse-Locker, J., Tang, B. L., Ericsson, M., Yusoff, A. R., Griffiths, G., and Hong, W. (1995) J. Cell Sci. 108, 2405-2414
73. Linstedt, A. D., Foguet, M., Renz, M., Seelig, H. P., Glick, B. S., and Hauri, H. P. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 5102-5105
74. Bachert, C., Lee, T. H., and Linstedt, A. D. (2001) Mol. Biol. Cell 12, 3152-3160
75. Otte, S., and Barlowe, C. (2002) EMBO J. 21, 6095-6104
76. Elbashir, S. M., Harborth, J., Lendeckel, W., Yalcin, A., Weber, K., and Tuschl, T. (2001) Nature 411, 494-498
77. Annaert, W. G., Leveaque, L., Craessaerts, K., Dierinck, I., Snellings, G., Westaway, D., George-Hyslop, P. S., Cordell, B., Fraser, P., and De Strooper, B. (1999) J. Cell Biol. 147, 277-294
78. Bell, A. W., Ward, M. A., Blackstock, W. P., Freeman, H. N., Choudhary, J. S., Lewis, A. P., Chotai, D., Fazel, A., Gushue, J. N., Paiement, J., Palcy, S., Chevet, E., Lafreniere-Roula, M., Solari, R., Thomas, D. Y., Rowley, A., and Bergeron, J. J. (2001) J. Biol. Chem. 276, 5152-5165
79. Ward, T. H., Polishchuk, R. S., Caplan, S., Hirschberg, K., and Lippincott-Schwartz, J. (2001) J. Cell Biol. 155, 557-570
80. Smith, T., Ferreira, L. R., Hebert, C., Norris, K., and Sauk, J. J. (1995) J. Biol. Chem. 270, 18323-18328
81. Matern, H., Yang, X., Andrulis, E., Sternglanz, R., Trepte, H. H., and Gallwitz, D. (2000) EMBO J. 19, 4485-4492
82. Barrowman, J., Wang, W., Zhang, Y., and Ferro-Novick, S. (2003) J. Biol. Chem. 278, 19878-19884
83. Hardt, B., Aparicio, R., Breuer, W., and Bause, E. (2001) Biol. Chem. 382, 1039-1047
84. Claros, M. G., and von Heijne, G. (1994) Comput. Appl. Biosci. 10, 685-686