-
1
-
-
79952674000
-
Interactome networks and human disease
-
21414488
-
Vidal M., Cusick M.E., and Barabasi A.L., Interactome networks and human disease. Cell, 2011. 144 (6): p. 986–98. https://doi.org/10.1016/j.cell.2011.02.016 PMID: 21414488
-
(2011)
Cell
, vol.144
, Issue.6
, pp. 986-998
-
-
Vidal, M.1
Cusick, M.E.2
Barabasi, A.L.3
-
2
-
-
0034628487
-
Guilt-by-association goes global
-
10688178
-
Oliver S., Guilt-by-association goes global. Nature, 2000. 403(6770): p. 601–3. https://doi.org/10.1038/35001165 PMID: 10688178
-
(2000)
Nature
, vol.403
, Issue.6770
, pp. 601-603
-
-
Oliver, S.1
-
3
-
-
34547146985
-
Network medicine—from obesity to the "diseasome"
-
17652657
-
Barabasi A.L., Network medicine—from obesity to the "diseasome". N Engl J Med, 2007. 357(4): p. 404–7. https://doi.org/10.1056/NEJMe078114 PMID: 17652657
-
(2007)
N Engl J Med
, vol.357
, Issue.4
, pp. 404-407
-
-
Barabasi, A.L.1
-
4
-
-
34547140875
-
The human disease network
-
17502601
-
Goh K.I., et al., The human disease network. Proc Natl Acad Sci U S A, 2007. 104(21): p. 8685–90. https://doi.org/10.1073/pnas.0701361104 PMID: 17502601
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, Issue.21
, pp. 8685-8690
-
-
Goh, K.I.1
-
5
-
-
72849142731
-
Edgetic perturbation models of human inherited disorders
-
19888216
-
Zhong Q., et al., Edgetic perturbation models of human inherited disorders. Mol Syst Biol, 2009. 5: p. 321. https://doi.org/10.1038/msb.2009.80 PMID: 19888216
-
(2009)
Mol Syst Biol
, vol.5
, pp. 321
-
-
Zhong, Q.1
-
6
-
-
84863010950
-
Three-dimensional reconstruction of protein networks provides insight into human genetic disease
-
22252508
-
Wang X., et al., Three-dimensional reconstruction of protein networks provides insight into human genetic disease. Nat Biotechnol, 2012. 30(2): p. 159–64. https://doi.org/10.1038/nbt.2106 PMID: 22252508
-
(2012)
Nat Biotechnol
, vol.30
, Issue.2
, pp. 159-164
-
-
Wang, X.1
-
7
-
-
84889606541
-
Edgotype: A fundamental link between genotype and phenotype
-
24287335
-
Sahni N., et al., Edgotype: a fundamental link between genotype and phenotype. Curr Opin Genet Dev, 2013. 23(6): p. 649–57. https://doi.org/10.1016/j.gde.2013.11.002 PMID: 24287335
-
(2013)
Curr Opin Genet Dev
, vol.23
, Issue.6
, pp. 649-657
-
-
Sahni, N.1
-
8
-
-
84928389942
-
Widespread macromolecular interaction perturbations in human genetic disorders
-
25910212
-
Sahni N., et al., Widespread macromolecular interaction perturbations in human genetic disorders. Cell, 2015. 161(3): p. 647–60. https://doi.org/10.1016/j.cell.2015.04.013 PMID: 25910212
-
(2015)
Cell
, vol.161
, Issue.3
, pp. 647-660
-
-
Sahni, N.1
-
9
-
-
84864053752
-
Viral perturbations of host networks reflect disease etiology
-
22761553
-
Gulbahce N., et al., Viral perturbations of host networks reflect disease etiology. PLoS Comput Biol, 2012. 8(6): p. e1002531. https://doi.org/10.1371/journal.pcbi.1002531 PMID: 22761553
-
(2012)
Plos Comput Biol
, vol.8
, Issue.6
-
-
Gulbahce, N.1
-
10
-
-
84864285545
-
Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins
-
22810586
-
Rozenblatt-Rosen O., et al., Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins. Nature, 2012. 487(7408): p. 491–5. https://doi.org/10.1038/nature11288 PMID: 22810586
-
(2012)
Nature
, vol.487
, Issue.7408
, pp. 491-495
-
-
Rozenblatt-Rosen, O.1
-
11
-
-
33845875196
-
Relating three-dimensional structures to protein networks provides evolutionary insights
-
17185604
-
Kim P.M., et al., Relating three-dimensional structures to protein networks provides evolutionary insights. Science, 2006. 314(5807): p. 1938–41. https://doi.org/10.1126/science.1136174 PMID: 17185604
-
(2006)
Science
, vol.314
, Issue.5807
, pp. 1938-1941
-
-
Kim, P.M.1
-
12
-
-
79960617916
-
Structural principles within the human-virus protein-protein interaction network
-
21680884
-
Franzosa E.A. and Xia Y., Structural principles within the human-virus protein-protein interaction network. Proc Natl Acad Sci U S A, 2011. 108(26): p. 10538–43. https://doi.org/10.1073/pnas. 1101440108 PMID: 21680884
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, Issue.26
, pp. 10538-10543
-
-
Franzosa, E.A.1
Xia, Y.2
-
13
-
-
84892876722
-
Signatures of pleiotropy, economy and convergent evolution in a domain-resolved map of human-virus protein-protein interaction networks
-
24339775
-
Garamszegi S., Franzosa E.A., and Xia Y., Signatures of pleiotropy, economy and convergent evolution in a domain-resolved map of human-virus protein-protein interaction networks. PLoS Pathog, 2013. 9 (12): p. e1003778. https://doi.org/10.1371/journal.ppat.1003778 PMID: 24339775
-
(2013)
Plos Pathog
, vol.9
, Issue.12
-
-
Garamszegi, S.1
Franzosa, E.A.2
Xia, Y.3
-
14
-
-
84891799734
-
The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases
-
Database issue, 24234451
-
Orchard S., et al., The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases. Nucleic Acids Res, 2014. 42(Database issue): p. D358–63. https://doi.org/10.1093/nar/gkt1115 PMID: 24234451
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D358-D363
-
-
Orchard, S.1
-
15
-
-
85018308823
-
HPIDB 2.0: A curated database for host-pathogen interactions
-
Ammari M.G., et al., HPIDB 2.0: a curated database for host-pathogen interactions. Database (Oxford), 2016. 2016.
-
(2016)
Database (Oxford)
, vol.2016
-
-
Ammari, M.G.1
-
16
-
-
58149200940
-
Human immunodeficiency virus type 1, human protein interaction database at NCBI
-
Database issue, PMID: 18927109
-
Fu W., et al., Human immunodeficiency virus type 1, human protein interaction database at NCBI. Nucleic Acids Res, 2009. 37(Database issue): p. D417–22. https://doi.org/10.1093/nar/gkn708PMID: 18927109
-
(2009)
Nucleic Acids Res
, vol.37
, pp. D417-D422
-
-
Fu, W.1
-
17
-
-
58149107292
-
Cataloguing the HIV type 1 human protein interaction network
-
19025396
-
Ptak R.G., et al., Cataloguing the HIV type 1 human protein interaction network. AIDS Res Hum Retrovi-ruses, 2008. 24(12): p. 1497–502. https://doi.org/10.1089/aid.2008.0113 PMID: 19025396
-
(2008)
AIDS Res Hum Retrovi-Ruses
, vol.24
, Issue.12
, pp. 1497-1502
-
-
Ptak, R.G.1
-
18
-
-
63149177869
-
HIV-host interactions: A map of viral perturbation of the host system
-
19262354
-
Pinney J.W., et al., HIV-host interactions: a map of viral perturbation of the host system. AIDS, 2009. 23(5): p. 549–54. https://doi.org/10.1097/QAD.0b013e328325a495 PMID: 19262354
-
(2009)
AIDS
, vol.23
, Issue.5
, pp. 549-554
-
-
Pinney, J.W.1
-
19
-
-
84891779335
-
3did: A catalog of domain-based interactions of known three-dimensional structure
-
Database issue
-
Mosca R., et al., 3did: a catalog of domain-based interactions of known three-dimensional structure. Nucleic Acids Res, 2014. 42(Database issue): p. D374–9. https://doi.org/10.1093/nar/gkt887 PMID: 24081580
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D374-D379
-
-
Mosca, R.1
-
20
-
-
84976897335
-
ELM 2016—data update and new functionality of the eukaryotic linear motif resource
-
26615199
-
Dinkel H., et al., ELM 2016—data update and new functionality of the eukaryotic linear motif resource. Nucleic Acids Res, 2016. 44(D1): p. D294–300. https://doi.org/10.1093/nar/gkv1291 PMID: 26615199
-
(2016)
Nucleic Acids Res
, vol.44
, Issue.D1
, pp. D294-D300
-
-
Dinkel, H.1
-
21
-
-
84891796273
-
IPfam: A database of protein family and domain interactions found in the Protein Data Bank
-
et al, Database issue, PMID: 24297255
-
Finn R.D., et al., iPfam: a database of protein family and domain interactions found in the Protein Data Bank. Nucleic Acids Res, 2014. 42(Database issue): p. D364–73. https://doi.org/10.1093/nar/gkt1210 PMID: 24297255
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D364-D373
-
-
Finn, R.D.1
-
22
-
-
0033954256
-
The Protein Data Bank
-
10592235
-
Berman H.M., et al., The Protein Data Bank. Nucleic Acids Res, 2000. 28(1): p. 235–42. PMID: 10592235
-
(2000)
Nucleic Acids Res
, vol.28
, Issue.1
, pp. 235-242
-
-
Berman, H.M.1
-
23
-
-
84976865403
-
The Pfam protein families database: Towards a more sustainable future
-
26673716
-
Finn R.D., et al., The Pfam protein families database: towards a more sustainable future. Nucleic Acids Res, 2016. 44(D1): p. D279–85. https://doi.org/10.1093/nar/gkv1344 PMID: 26673716
-
(2016)
Nucleic Acids Res
, vol.44
, Issue.D1
, pp. D279-D285
-
-
Finn, R.D.1
-
24
-
-
84904406947
-
Genetic variations and diseases in UniProtKB/Swiss-Prot: The ins and outs of expert manual curation
-
24848695
-
Famiglietti M.L., et al., Genetic variations and diseases in UniProtKB/Swiss-Prot: the ins and outs of expert manual curation. Hum Mutat, 2014. 35(8): p. 927–35. https://doi.org/10.1002/humu.22594 PMID: 24848695
-
(2014)
Hum Mutat
, vol.35
, Issue.8
, pp. 927-935
-
-
Famiglietti, M.L.1
-
25
-
-
84976904305
-
ClinVar: Public archive of interpretations of clinically relevant variants
-
26582918
-
Landrum M.J., et al., ClinVar: public archive of interpretations of clinically relevant variants. Nucleic Acids Res, 2016. 44(D1): p. D862–8. https://doi.org/10.1093/nar/gkv1222 PMID: 26582918
-
(2016)
Nucleic Acids Res
, vol.44
, Issue.D1
, pp. D862-D868
-
-
Landrum, M.J.1
-
26
-
-
0034614637
-
The hallmarks of cancer
-
10647931
-
Hanahan D. and Weinberg R.A., The hallmarks of cancer. Cell, 2000. 100(1): p. 57–70. PMID: 10647931
-
(2000)
Cell
, vol.100
, Issue.1
, pp. 57-70
-
-
Hanahan, D.1
Weinberg, R.A.2
-
27
-
-
84896088630
-
Human viral oncogenesis: A cancer hallmarks analysis
-
24629334
-
Mesri E.A., Feitelson M.A., and Munger K., Human viral oncogenesis: a cancer hallmarks analysis. Cell Host Microbe, 2014. 15(3): p. 266–82. https://doi.org/10.1016/j.chom.2014.02.011 PMID: 24629334
-
(2014)
Cell Host Microbe
, vol.15
, Issue.3
, pp. 266-282
-
-
Mesri, E.A.1
Feitelson, M.A.2
Munger, K.3
-
28
-
-
49749222804
-
Virus Particles in Cultured Lymphoblasts from Burkitt’s Lymphoma
-
14107961
-
Epstein M.A., Achong B.G., and Barr Y.M., Virus Particles in Cultured Lymphoblasts from Burkitt’s Lymphoma. Lancet, 1964. 1(7335): p. 702–3. PMID: 14107961
-
(1964)
Lancet
, vol.1
, Issue.7335
, pp. 702-703
-
-
Epstein, M.A.1
Achong, B.G.2
Barr, Y.M.3
-
29
-
-
84969921355
-
Identification and Characterization of Epstein-Barr Virus Genomes in Lung Carcinoma Biopsy Samples by Next-Generation Sequencing Technology
-
27189712
-
Wang S., et al., Identification and Characterization of Epstein-Barr Virus Genomes in Lung Carcinoma Biopsy Samples by Next-Generation Sequencing Technology. Sci Rep, 2016. 6: p. 26156. https://doi. org/10.1038/srep26156 PMID: 27189712
-
(2016)
Sci Rep
, vol.6
, pp. 26156
-
-
Wang, S.1
-
30
-
-
84856074205
-
EBV-associated T/NK-cell lymphoproliferative diseases in nonimmunocompromised hosts: Prospective analysis of 108 cases
-
Kimura H., et al., EBV-associated T/NK-cell lymphoproliferative diseases in nonimmunocompromised hosts: prospective analysis of 108 cases. Blood, 2012. 119(3): p. 673–86. https://doi.org/10.1182/blood-2011-10-381921 PMID: 22096243
-
(2012)
Blood
, vol.119
, Issue.3
, pp. 673-686
-
-
Kimura, H.1
-
31
-
-
84909969283
-
The interplay of host genetic factors and Epstein-Barr virus in the development of nasopharyngeal carcinoma
-
25367335
-
Lung M.L., et al., The interplay of host genetic factors and Epstein-Barr virus in the development of nasopharyngeal carcinoma. Chin J Cancer, 2014. 33(11): p. 556–68. https://doi.org/10.5732/cjc.014. 10170 PMID: 25367335
-
(2014)
Chin J Cancer
, vol.33
, Issue.11
, pp. 556-568
-
-
Lung, M.L.1
-
32
-
-
50149120544
-
Epstein-Barr virus and gastric carcinoma: Virus-host interactions leading to carcinoma
-
18616681
-
Fukayama M., Hino R., and Uozaki H., Epstein-Barr virus and gastric carcinoma: virus-host interactions leading to carcinoma. Cancer Sci, 2008. 99(9): p. 1726–33. https://doi.org/10.1111/j.1349-7006.2008. 00888.x PMID: 18616681
-
(2008)
Cancer Sci
, vol.99
, Issue.9
, pp. 1726-1733
-
-
Fukayama, M.1
Hino, R.2
Uozaki, H.3
-
33
-
-
34548497655
-
Human papillomavirus and cervical cancer
-
17826171
-
Schiffman M., et al., Human papillomavirus and cervical cancer. Lancet, 2007. 370(9590): p. 890–907. https://doi.org/10.1016/S0140-6736(07)61416-0 PMID: 17826171
-
(2007)
Lancet
, vol.370
, Issue.9590
, pp. 890-907
-
-
Schiffman, M.1
-
34
-
-
85015175312
-
Analysis of The Cancer Genome Atlas sequencing data reveals novel properties of the human papillomavirus 16 genome in head and neck squamous cell carcinoma
-
PMID: 28187443
-
Nulton T.J., et al., Analysis of The Cancer Genome Atlas sequencing data reveals novel properties of the human papillomavirus 16 genome in head and neck squamous cell carcinoma. Oncotarget, 2017. 8 (11): p. 17684–17699. https://doi.org/10.18632/oncotarget.15179 PMID: 28187443
-
(2017)
Oncotarget
, vol.8
, Issue.11
, pp. 17684-17699
-
-
Nulton, T.J.1
-
35
-
-
84876418361
-
Updating the natural history of human papillomavirus and anogenital cancers
-
Moscicki A.B., et al., Updating the natural history of human papillomavirus and anogenital cancers. Vaccine, 2012. 30 Suppl 5: p. F24–33.
-
(2012)
Vaccine
, vol.30
, pp. F24-F33
-
-
Moscicki, A.B.1
-
36
-
-
79958748194
-
Human papillomavirus infection and bladder cancer risk: A meta-analysis
-
21673031
-
Li N., et al., Human papillomavirus infection and bladder cancer risk: a meta-analysis. J Infect Dis, 2011. 204(2): p. 217–23. https://doi.org/10.1093/infdis/jir248 PMID: 21673031
-
(2011)
J Infect Dis
, vol.204
, Issue.2
, pp. 217-223
-
-
Li, N.1
-
37
-
-
79958738901
-
Human papillomavirus infection and sporadic breast carcinoma risk: A meta-analysis
-
20740311
-
Li N., et al., Human papillomavirus infection and sporadic breast carcinoma risk: a meta-analysis. Breast Cancer Res Treat, 2011. 126(2): p. 515–20. https://doi.org/10.1007/s10549-010-1128-0 PMID: 20740311
-
(2011)
Breast Cancer Res Treat
, vol.126
, Issue.2
, pp. 515-520
-
-
Li, N.1
-
38
-
-
67349277104
-
Incidence of human papilloma virus in lung cancer
-
Klein F., Amin Kotb W.F., and Petersen I., Incidence of human papilloma virus in lung cancer. Lung Cancer, 2009. 65(1): p. 13–8. https://doi.org/10.1016/j.lungcan.2008.10.003PMID: 19019488
-
(2009)
Lung Cancer
, vol.65
, Issue.1
, pp. 13-18
-
-
Klein, F.1
Amin Kotb, W.F.2
Petersen, I.3
-
39
-
-
84929694497
-
Implication of high risk human papillomavirus HR-HPV infection in prostate cancer in Indian population—a pioneering case-control analysis
-
25592643
-
Singh N., et al., Implication of high risk human papillomavirus HR-HPV infection in prostate cancer in Indian population—a pioneering case-control analysis. Sci Rep, 2015. 5: p. 7822. https://doi.org/10. 1038/srep07822 PMID: 25592643
-
(2015)
Sci Rep
, vol.5
, pp. 7822
-
-
Singh, N.1
-
40
-
-
55249101754
-
HIV-induced immunodeficiency and mortality from AIDS-defining and non-AIDS-defining malignancies
-
18832878
-
Monforte A., et al., HIV-induced immunodeficiency and mortality from AIDS-defining and non-AIDS-defining malignancies. AIDS, 2008. 22(16): p. 2143–53. https://doi.org/10.1097/QAD. 0b013e3283112b77 PMID: 18832878
-
(2008)
AIDS
, vol.22
, Issue.16
, pp. 2143-2153
-
-
Monforte, A.1
-
41
-
-
34347323902
-
Incidence of cancers in people with HIV/AIDS compared with immunosuppressed transplant recipients: A meta-analysis
-
17617273
-
Grulich A.E., et al., Incidence of cancers in people with HIV/AIDS compared with immunosuppressed transplant recipients: a meta-analysis. Lancet, 2007. 370(9581): p. 59–67.https://doi.org/10.1016/S0140-6736(07)61050-2 PMID: 17617273
-
(2007)
Lancet
, vol.370
, Issue.9581
, pp. 59-67
-
-
Grulich, A.E.1
-
42
-
-
0142088865
-
Interaction between HIV-1 Tat and pRb2/p130: A possible mechanism in the pathogenesis of AIDS-related neoplasms
-
13679860
-
De Falco G., et al., Interaction between HIV-1 Tat and pRb2/p130: a possible mechanism in the pathogenesis of AIDS-related neoplasms. Oncogene, 2003. 22(40): p. 6214–9. https://doi.org/10.1038/sj.onc.1206637 PMID: 13679860
-
(2003)
Oncogene
, vol.22
, Issue.40
, pp. 6214-6219
-
-
de Falco, G.1
-
43
-
-
53149105513
-
HIV-1 Tat and AIDS-associated cancer: Targeting the cellular anti-cancer barrier?
-
18577246
-
Nunnari G., Smith J.A., and Daniel R., HIV-1 Tat and AIDS-associated cancer: targeting the cellular anti-cancer barrier? J Exp Clin Cancer Res, 2008. 27: p. 3. https://doi.org/10.1186/1756-9966-27-3 PMID: 18577246
-
(2008)
J Exp Clin Cancer Res
, vol.27
, pp. 3
-
-
Nunnari, G.1
Smith, J.A.2
Daniel, R.3
-
44
-
-
0030792141
-
SH3-mediated Hck tyrosine kinase activation and fibroblast transformation by the Nef protein of HIV-1
-
9218412
-
Briggs S.D., et al., SH3-mediated Hck tyrosine kinase activation and fibroblast transformation by the Nef protein of HIV-1. J Biol Chem, 1997. 272(29): p. 17899–902. PMID: 9218412
-
(1997)
J Biol Chem
, vol.272
, Issue.29
, pp. 17899-17902
-
-
Briggs, S.D.1
-
45
-
-
0037056082
-
Cardiovascular manifestations of HIV infection
-
12221062
-
Barbaro G., Cardiovascular manifestations of HIV infection. Circulation, 2002. 106(11): p. 1420–5. PMID: 12221062
-
(2002)
Circulation
, vol.106
, Issue.11
, pp. 1420-1425
-
-
Barbaro, G.1
-
46
-
-
0033937338
-
Impact of highly active antiretroviral therapy in HIV-positive patients with cardiac involvement
-
PMID: 10908024
-
Pugliese A., et al., Impact of highly active antiretroviral therapy in HIV-positive patients with cardiac involvement. J Infect, 2000. 40(3): p. 282–4. https://doi.org/10.1053/jinf.2000.0672 PMID: 10908024
-
(2000)
J Infect
, vol.40
, Issue.3
, pp. 282-284
-
-
Pugliese, A.1
-
47
-
-
0032102076
-
Cardiac manifestations of HIV/AIDS: A review of disease spectrum and clinical management
-
9637579
-
Yunis N.A. and Stone V.E., Cardiac manifestations of HIV/AIDS: a review of disease spectrum and clinical management. J Acquir Immune Defic Syndr Hum Retrovirol, 1998. 18(2): p. 145–54. PMID: 9637579
-
(1998)
J Acquir Immune Defic Syndr Hum Retrovirol
, vol.18
, Issue.2
, pp. 145-154
-
-
Yunis, N.A.1
Stone, V.E.2
-
48
-
-
0035936629
-
Parkinsonism as the presenting manifestation of HIV infection: Improvement on HAART
-
11160977
-
Hersh B.P., Rajendran P.R., and Battinelli D., Parkinsonism as the presenting manifestation of HIV infection: improvement on HAART. Neurology, 2001. 56(2): p. 278–9. PMID: 11160977
-
(2001)
Neurology
, vol.56
, Issue.2
, pp. 278-279
-
-
Hersh, B.P.1
Rajendran, P.R.2
Battinelli, D.3
-
49
-
-
0036322227
-
Parkinsonism in HIV dementia
-
Koutsilieri E., et al., Parkinsonism in HIV dementia. J Neural Transm (Vienna), 2002. 109(5–6): p. 767– 75.
-
(2002)
J Neural Transm (Vienna)
, vol.109
, Issue.5-6
, pp. 767-775
-
-
Koutsilieri, E.1
-
50
-
-
0031824492
-
Parkinsonism with HIV infection
-
9686775
-
Mirsattari S.M., Power C., and Nath A., Parkinsonism with HIV infection. Mov Disord, 1998. 13(4): p. 684–9. https://doi.org/10.1002/mds.870130413 PMID: 9686775
-
(1998)
Mov Disord
, vol.13
, Issue.4
, pp. 684-689
-
-
Mirsattari, S.M.1
Power, C.2
Nath, A.3
-
51
-
-
84964265139
-
Tuning of AKT-pathway by Nef and its blockade by protease inhibitors results in limited recovery in latently HIV infected T-cell line
-
27076174
-
Kumar A., et al., Tuning of AKT-pathway by Nef and its blockade by protease inhibitors results in limited recovery in latently HIV infected T-cell line. Sci Rep, 2016. 6: p. 24090. https://doi.org/10.1038/srep24090 PMID: 27076174
-
(2016)
Sci Rep
, vol.6
, pp. 24090
-
-
Kumar, A.1
-
52
-
-
0345257290
-
Epstein-Barr Virus (EBV) LMP2A induces alterations in gene transcription similar to those observed in Reed-Sternberg cells of Hodgkin lymphoma
-
12907455
-
Portis T., Dyck P., and Longnecker R.,Epstein-Barr Virus (EBV) LMP2A induces alterations in gene transcription similar to those observed in Reed-Sternberg cells of Hodgkin lymphoma. Blood, 2003. 102(12): p. 4166–78. https://doi.org/10.1182/blood-2003-04-1018 PMID: 12907455
-
(2003)
Blood
, vol.102
, Issue.12
, pp. 4166-4178
-
-
Portis, T.1
Dyck, P.2
Longnecker, R.3
-
53
-
-
84870951604
-
HIV-1 Nef in macrophage-mediated disease pathogenesis
-
PMID: 23215766
-
Lamers S.L., et al., HIV-1 Nef in macrophage-mediated disease pathogenesis. Int Rev Immunol, 2012. 31(6): p. 432–50. https://doi.org/10.3109/08830185.2012.737073 PMID: 23215766
-
(2012)
Int Rev Immunol
, vol.31
, Issue.6
, pp. 432-450
-
-
Lamers, S.L.1
-
54
-
-
84996606587
-
Global burden of cancers attributable to infections in 2012: A synthetic analysis
-
27470177
-
Plummer M., et al., Global burden of cancers attributable to infections in 2012: a synthetic analysis. Lancet Glob Health, 2016. 4(9): p. e609–16. https://doi.org/10.1016/S2214-109X(16)30143-7 PMID: 27470177
-
(2016)
Lancet Glob Health
, vol.4
, Issue.9
, pp. e609-e616
-
-
Plummer, M.1
-
55
-
-
84866347303
-
Retroviral oncogenes: A historical primer
-
22898541
-
Vogt P.K., Retroviral oncogenes: a historical primer. Nat Rev Cancer, 2012. 12(9): p. 639–48. https://doi.org/10.1038/nrc3320 PMID: 22898541
-
(2012)
Nat Rev Cancer
, vol.12
, Issue.9
, pp. 639-648
-
-
Vogt, P.K.1
-
56
-
-
70350503061
-
Immune control of mammalian gamma-herpesviruses: Lessons from murid herpesvirus-4
-
Pt 10, 19605591
-
Stevenson P.G., Simas J.P., and Efstathiou S., Immune control of mammalian gamma-herpesviruses: lessons from murid herpesvirus-4. J Gen Virol, 2009. 90(Pt 10): p. 2317–30. https://doi.org/10.1099/vir. 0.013300-0 PMID: 19605591
-
(2009)
J Gen Virol
, vol.90
, pp. 2317-2330
-
-
Stevenson, P.G.1
Simas, J.P.2
Efstathiou, S.3
-
57
-
-
0020328955
-
Human EJ bladder carcinoma oncogene is homologue of Harvey sarcoma virus ras gene
-
6283357
-
Parada L.F., et al., Human EJ bladder carcinoma oncogene is homologue of Harvey sarcoma virus ras gene. Nature, 1982. 297(5866): p. 474–8. PMID: 6283357
-
(1982)
Nature
, vol.297
, Issue.5866
, pp. 474-478
-
-
Parada, L.F.1
-
58
-
-
84964804054
-
Cancers attributable to infections among adults with HIV in the United States
-
26182198
-
de Martel C., et al., Cancers attributable to infections among adults with HIV in the United States. AIDS, 2015. 29(16): p. 2173–81. https://doi.org/10.1097/QAD.0000000000000808 PMID: 26182198
-
(2015)
AIDS
, vol.29
, Issue.16
, pp. 2173-2181
-
-
de Martel, C.1
-
59
-
-
5344221041
-
Viral Infections in Juvenile Myelomonocytic Leukemia: Prevalence and Clinical Implications
-
Manabe A., et al., Viral Infections in Juvenile Myelomonocytic Leukemia: Prevalence and Clinical Implications. J Pediatr Hematol Oncol, 2004. 26(10): p. 636–641.
-
(2004)
J Pediatr Hematol Oncol
, vol.26
, Issue.10
, pp. 636-641
-
-
Manabe, A.1
-
60
-
-
43449083229
-
Recent advances in the pathogenesis and management of juvenile myelomonocytic leukaemia
-
18422786
-
Koike K. and Matsuda K., Recent advances in the pathogenesis and management of juvenile myelomonocytic leukaemia. Br J Haematol, 2008. 141(5): p. 567–75. https://doi.org/10.1111/j.1365-2141.2008. 07104.x PMID: 18422786
-
(2008)
Br J Haematol
, vol.141
, Issue.5
, pp. 567-575
-
-
Koike, K.1
Matsuda, K.2
-
61
-
-
84995920353
-
EGFR Dynamics Change during Activation in Native Membranes as Revealed by NMR
-
27839865
-
Kaplan M., et al., EGFR Dynamics Change during Activation in Native Membranes as Revealed by NMR. Cell, 2016. 167(5): p. 1241–1251 e11. https://doi.org/10.1016/j.cell.2016.10.038 PMID: 27839865
-
(2016)
Cell
, vol.167
, Issue.5
, pp. 1241-1251
-
-
Kaplan, M.1
-
62
-
-
85038258025
-
Activation of the EGF Receptor by Ligand Binding and Oncogenic Mutations: The "Rotation Model"
-
Purba E.R., Saita E.I., and Maruyama I.N., Activation of the EGF Receptor by Ligand Binding and Oncogenic Mutations: The "Rotation Model". Cells, 2017. 6(2).
-
(2017)
Cells
, vol.6
, Issue.2
-
-
Purba, E.R.1
Saita, E.I.2
Maruyama, I.N.3
-
63
-
-
70949087383
-
Inflammatory bowel disease and mutations affecting the interleukin-10 receptor
-
19890111
-
Glocker E.O., et al., Inflammatory bowel disease and mutations affecting the interleukin-10 receptor. N Engl J Med, 2009. 361(21): p. 2033–45. https://doi.org/10.1056/NEJMoa0907206 PMID: 19890111
-
(2009)
N Engl J Med
, vol.361
, Issue.21
, pp. 2033-2045
-
-
Glocker, E.O.1
-
64
-
-
70349275250
-
Virus-encoded homologs of cellular interleukin-10 and their control of host immune function
-
19640997
-
Slobedman B., et al., Virus-encoded homologs of cellular interleukin-10 and their control of host immune function. J Virol, 2009. 83(19): p. 9618–29. https://doi.org/10.1128/JVI.01098-09 PMID: 19640997
-
(2009)
J Virol
, vol.83
, Issue.19
, pp. 9618-9629
-
-
Slobedman, B.1
-
65
-
-
0031667550
-
Lipid-mediated gene transfer of viral IL-10 prolongs vascularized cardiac allograft survival by inhibiting donor-specific cellular and humoral immune responses
-
10326031
-
DeBruyne L.A., et al., Lipid-mediated gene transfer of viral IL-10 prolongs vascularized cardiac allograft survival by inhibiting donor-specific cellular and humoral immune responses. Gene Ther, 1998. 5(8): p. 1079–87. https://doi.org/10.1038/sj.gt.3300694 PMID: 10326031
-
(1998)
Gene Ther
, vol.5
, Issue.8
, pp. 1079-1087
-
-
Debruyne, L.A.1
-
66
-
-
84938980634
-
IL10 receptor is a novel therapeutic target in DLBCLs
-
25733167
-
Beguelin W., et al., IL10 receptor is a novel therapeutic target in DLBCLs. Leukemia, 2015. 29(8): p. 1684–94. https://doi.org/10.1038/leu.2015.57 PMID: 25733167
-
(2015)
Leukemia
, vol.29
, Issue.8
, pp. 1684-1694
-
-
Beguelin, W.1
-
67
-
-
77954990257
-
Role of the Kaposi’s sarcoma-associated herpesvirus K15 SH3 binding site in inflammatory signaling and B-cell activation
-
20534855
-
Pietrek M., et al., Role of the Kaposi’s sarcoma-associated herpesvirus K15 SH3 binding site in inflammatory signaling and B-cell activation. J Virol, 2010. 84(16): p. 8231–40. https://doi.org/10.1128/JVI. 01696-09 PMID: 20534855
-
(2010)
J Virol
, vol.84
, Issue.16
, pp. 8231-8240
-
-
Pietrek, M.1
-
68
-
-
0041513490
-
C-SRC tyrosine kinase activity is associated with tumor colonization in bone and lung in an animal model of human breast cancer metastasis
-
12941830
-
Myoui A., et al., C-SRC tyrosine kinase activity is associated with tumor colonization in bone and lung in an animal model of human breast cancer metastasis. Cancer Res, 2003. 63(16): p. 5028–33. PMID: 12941830
-
(2003)
Cancer Res
, vol.63
, Issue.16
, pp. 5028-5033
-
-
Myoui, A.1
-
69
-
-
84866410479
-
Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing
-
22980975
-
Imielinski M., et al., Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing. Cell, 2012. 150(6): p. 1107–20. https://doi.org/10.1016/j.cell.2012.08.029 PMID: 22980975
-
(2012)
Cell
, vol.150
, Issue.6
, pp. 1107-1120
-
-
Imielinski, M.1
-
70
-
-
0028332032
-
Polyoma middle tumor antigen interacts with SHC protein via the NPTY (Asn-Pro-Thr-Tyr) motif in middle tumor antigen
-
8022784
-
Campbell K.S., et al., Polyoma middle tumor antigen interacts with SHC protein via the NPTY (Asn-Pro-Thr-Tyr) motif in middle tumor antigen. Proc Natl Acad Sci U S A, 1994. 91(14): p. 6344–8. PMID: 8022784
-
(1994)
Proc Natl Acad Sci U S A
, vol.91
, Issue.14
, pp. 6344-6348
-
-
Campbell, K.S.1
-
71
-
-
84880871624
-
The ShcA PTB domain functions as a biological sensor of phosphotyrosine signaling during breast cancer progression
-
23695548
-
Ahn R., et al., The ShcA PTB domain functions as a biological sensor of phosphotyrosine signaling during breast cancer progression. Cancer Res, 2013. 73(14): p. 4521–32. https://doi.org/10.1158/0008-5472.CAN-12-4178 PMID: 23695548
-
(2013)
Cancer Res
, vol.73
, Issue.14
, pp. 4521-4532
-
-
Ahn, R.1
-
72
-
-
63449121941
-
The nucleocapsid region of HIV-1 Gag cooperates with the PTAP and LYPXnL late domains to recruit the cellular machinery necessary for viral budding
-
Dussupt V., et al., The nucleocapsid region of HIV-1 Gag cooperates with the PTAP and LYPXnL late domains to recruit the cellular machinery necessary for viral budding. PLoS Pathog, 2009. 5(3): p. e1000339. https://doi.org/10.1371/journal.ppat.1000339 PMID: 19282983
-
(2009)
Plos Pathog
, vol.5
, Issue.3
-
-
Dussupt, V.1
-
73
-
-
35648941223
-
The tyrosine phosphatase HD-PTP: A novel player in endothelial migration
-
17959146
-
Castiglioni S., Maier J.A., and Mariotti M., The tyrosine phosphatase HD-PTP: A novel player in endothelial migration. Biochem Biophys Res Commun, 2007. 364(3): p. 534–9. https://doi.org/10.1016/j. bbrc.2007.10.022 PMID: 17959146
-
(2007)
Biochem Biophys Res Commun
, vol.364
, Issue.3
, pp. 534-539
-
-
Castiglioni, S.1
Maier, J.A.2
Mariotti, M.3
-
74
-
-
84971267990
-
Haploinsufficiency of the ESCRT Component HD-PTP Predisposes to Cancer
-
27210750
-
Manteghi S., et al., Haploinsufficiency of the ESCRT Component HD-PTP Predisposes to Cancer. Cell Rep, 2016. 15(9): p. 1893–900. https://doi.org/10.1016/j.celrep.2016.04.076 PMID: 27210750
-
(2016)
Cell Rep
, vol.15
, Issue.9
, pp. 1893-1900
-
-
Manteghi, S.1
-
75
-
-
64749094310
-
The cancer genome
-
19360079
-
Stratton M.R., Campbell P.J., and Futreal P.A., The cancer genome. Nature, 2009. 458(7239): p. 719– 24. https://doi.org/10.1038/nature07943 PMID: 19360079
-
(2009)
Nature
, vol.458
, Issue.7239
, pp. 719-724
-
-
Stratton, M.R.1
Campbell, P.J.2
Futreal, P.A.3
-
76
-
-
85016154270
-
COSMIC: Somatic cancer genetics at high-resolution
-
27899578
-
Forbes S.A., et al., COSMIC: somatic cancer genetics at high-resolution. Nucleic Acids Res, 2017. 45 (D1): p. D777–D783. https://doi.org/10.1093/nar/gkw1121 PMID: 27899578
-
(2017)
Nucleic Acids Res
, vol.45
, Issue.D1
, pp. D777-D783
-
-
Forbes, S.A.1
-
77
-
-
33644550021
-
Structural systems biology: Modelling protein interactions
-
16496021
-
Aloy P. and Russell R.B., Structural systems biology: modelling protein interactions. Nat Rev Mol Cell Biol, 2006. 7(3): p. 188–97. https://doi.org/10.1038/nrm1859 PMID: 16496021
-
(2006)
Nat Rev Mol Cell Biol
, vol.7
, Issue.3
, pp. 188-197
-
-
Aloy, P.1
Russell, R.B.2
-
78
-
-
42349100920
-
KSHV-transformed primary effusion lymphoma cells induce a VEGF-dependent angiogenesis and establish functional gap junctions with endothelial cells
-
18094712
-
Haddad L., et al., KSHV-transformed primary effusion lymphoma cells induce a VEGF-dependent angiogenesis and establish functional gap junctions with endothelial cells. Leukemia, 2008. 22(4): p. 826–34. https://doi.org/10.1038/sj.leu.2405081 PMID: 18094712
-
(2008)
Leukemia
, vol.22
, Issue.4
, pp. 826-834
-
-
Haddad, L.1
-
79
-
-
33645748053
-
NF-kappaB is essential for the progression of KSHV-and EBV-infected lymphomas in vivo
-
16380446
-
Keller S.A., et al., NF-kappaB is essential for the progression of KSHV-and EBV-infected lymphomas in vivo. Blood, 2006. 107(8): p. 3295–302. https://doi.org/10.1182/blood-2005-07-2730 PMID: 16380446
-
(2006)
Blood
, vol.107
, Issue.8
, pp. 3295-3302
-
-
Keller, S.A.1
-
80
-
-
49149098054
-
A meta-analysis of nonsense mutations causing human genetic disease
-
18454449
-
Mort M., et al., A meta-analysis of nonsense mutations causing human genetic disease. Hum Mutat, 2008. 29(8): p. 1037–47. https://doi.org/10.1002/humu.20763 PMID: 18454449
-
(2008)
Hum Mutat
, vol.29
, Issue.8
, pp. 1037-1047
-
-
Mort, M.1
-
81
-
-
84899518211
-
InterProScan 5: Genome-scale protein function classification
-
24451626
-
Jones P., et al., InterProScan 5: genome-scale protein function classification. Bioinformatics, 2014. 30 (9): p. 1236–40. https://doi.org/10.1093/bioinformatics/btu031 PMID: 24451626
-
(2014)
Bioinformatics
, vol.30
, Issue.9
, pp. 1236-1240
-
-
Jones, P.1
-
82
-
-
84973338712
-
The Ensembl Variant Effect Predictor
-
PMID: 27268795
-
McLaren W., et al., The Ensembl Variant Effect Predictor. Genome Biol, 2016. 17(1): p. 122. https://doi.org/10.1186/s13059-016-0974-4PMID: 27268795
-
(2016)
Genome Biol
, vol.17
, Issue.1
, pp. 122
-
-
McLaren, W.1
-
83
-
-
84941103725
-
Disease Ontology 2015 update: An expanded and updated database of human diseases for linking biomedical knowledge through disease data
-
Database issue, D1071–8
-
Kibbe W.A., et al., Disease Ontology 2015 update: an expanded and updated database of human diseases for linking biomedical knowledge through disease data. Nucleic Acids Res, 2015. 43(Database issue): p. D1071–8. https://doi.org/10.1093/nar/gku1011 PMID: 25348409
-
(2015)
Nucleic Acids Res
, Issue.43
-
-
Kibbe, W.A.1
-
84
-
-
84864358886
-
Representation of rare diseases in health information systems: The Orphanet approach to serve a wide range of end users
-
22422702
-
Rath A., et al., Representation of rare diseases in health information systems: the Orphanet approach to serve a wide range of end users. Hum Mutat, 2012. 33(5): p. 803–8. https://doi.org/10.1002/humu. 22078 PMID: 22422702
-
(2012)
Hum Mutat
, vol.33
, Issue.5
, pp. 803-808
-
-
Rath, A.1
-
86
-
-
84897873840
-
Protter: Interactive protein feature visualization and integration with experimental proteomic data
-
24162465
-
Omasits U., et al., Protter: interactive protein feature visualization and integration with experimental proteomic data. Bioinformatics, 2014. 30(6): p. 884–6. https://doi.org/10.1093/bioinformatics/btt607 PMID: 24162465
-
(2014)
Bioinformatics
, vol.30
, Issue.6
, pp. 884-886
-
-
Omasits, U.1
-
87
-
-
85016141786
-
InterPro in 2017-beyond protein family and domain annotations
-
27899635
-
Finn R.D., et al., InterPro in 2017-beyond protein family and domain annotations. Nucleic Acids Res, 2017. 45(D1): p. D190–D199. https://doi.org/10.1093/nar/gkw1107 PMID: 27899635
-
(2017)
Nucleic Acids Res
, vol.45
, Issue.D1
, pp. D190-D199
-
-
Finn, R.D.1
-
88
-
-
78149276744
-
Permutation P-values should never be zero: Calculating exact P-values when permutations are randomly drawn
-
Phipson B. and Smyth G.K., Permutation P-values should never be zero: calculating exact P-values when permutations are randomly drawn. Stat Appl Genet Mol Biol, 2010. 9: p. Article 39.
-
(2010)
Stat Appl Genet Mol Biol
, pp. 9
-
-
Phipson, B.1
Smyth, G.K.2
|