-
1
-
-
40549120596
-
The RAST server: Rapid annotations using subsystems technology
-
Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, et al. 2008. The RAST Server: rapid annotations using subsystems technology. BMC Genomics 9: 75.
-
(2008)
BMC Genomics
, vol.9
, pp. 75
-
-
Aziz, R.K.1
Bartels, D.2
Best, A.A.3
DeJongh, M.4
Disz, T.5
Edwards, R.A.6
Formsma, K.7
Gerdes, S.8
Glass, E.M.9
Kubal, M.10
-
2
-
-
38449108664
-
-
(ed. The C. elegans Research Community)
-
Bessereau JL 2006. Transposons in C. elegans. In WormBook (ed. The C. elegans Research Community). doi/10.1895/wormbook.1.70.1, http://www.wormbook.org.
-
(2006)
Transposons in C. Elegans
-
-
Bessereau, J.L.1
-
3
-
-
0016063911
-
The genetics of caenorhabditis elegans
-
Brenner S. 1974. The genetics of Caenorhabditis elegans. Genetics 77: 71-94.
-
(1974)
Genetics
, vol.77
, pp. 71-94
-
-
Brenner, S.1
-
4
-
-
0032509302
-
Genome sequence of the nematode C. Elegans: A platform for investigating biology
-
The C. elegans Sequencing Consortium
-
The C. elegans Sequencing Consortium. 1998. Genome sequence of the nematode C. elegans: a platform for investigating biology. Science 282: 2012-2018.
-
(1998)
Science
, vol.282
, pp. 2012-2018
-
-
-
5
-
-
0024281825
-
Genome linking with Yeast artificial chromosomes
-
Coulson A, Waterston R, Kiff J, Sulston J, Kohara Y. 1988. Genome linking with yeast artificial chromosomes. Nature 335: 184-186.
-
(1988)
Nature
, vol.335
, pp. 184-186
-
-
Coulson, A.1
Waterston, R.2
Kiff, J.3
Sulston, J.4
Kohara, Y.5
-
6
-
-
0026210647
-
YACs and the C. Elegans genome
-
Coulson A, Kozono Y, Lutterbach B, Shownkeen R, Sulston J, Waterston R. 1991. YACs and the C. elegans genome. Bioessays 13: 413-417.
-
(1991)
Bioessays
, vol.13
, pp. 413-417
-
-
Coulson, A.1
Kozono, Y.2
Lutterbach, B.3
Shownkeen, R.4
Sulston, J.5
Waterston, R.6
-
9
-
-
85014634138
-
Metagenome-assembled draft genome sequence of a novel microbial stenotrophomonas maltophilia strain isolated from caenorhabditis remanei tissue
-
Fierst JL, Murdock DA, Thanthiriwatte C, Willis JH, Phillips PC. 2017. Metagenome-assembled draft genome sequence of a novel microbial Stenotrophomonas maltophilia strain isolated from Caenorhabditis remanei tissue. Genome Announc 5: e01646-16.
-
(2017)
Genome Announc
, vol.5
, pp. e01646-e01716
-
-
Fierst, J.L.1
Murdock, D.A.2
Thanthiriwatte, C.3
Willis, J.H.4
Phillips, P.C.5
-
10
-
-
77955499817
-
Whole-genome profiling of mutagenesis in caenorhabditis elegans
-
Flibotte S, Edgley ML, Chaudhry I, Taylor J, Neil SE, Rogula A, Zapf R, Hirst M, Butterfield Y, Jones SJ, et al. 2010. Whole-genome profiling of mutagenesis in Caenorhabditis elegans. Genetics 185: 431-441.
-
(2010)
Genetics
, vol.185
, pp. 431-441
-
-
Flibotte, S.1
Edgley, M.L.2
Chaudhry, I.3
Taylor, J.4
Neil, S.E.5
Rogula, A.6
Zapf, R.7
Hirst, M.8
Butterfield, Y.9
Jones, S.J.10
-
11
-
-
84946557268
-
Oxford nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome
-
Goodwin S, Gurtowski J, Ethe-Sayers S, Deshpande P, Schatz MC, McCombie WR. 2015. Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome. Genome Res 25: 1750-1756.
-
(2015)
Genome Res
, vol.25
, pp. 1750-1756
-
-
Goodwin, S.1
Gurtowski, J.2
Ethe-Sayers, S.3
Deshpande, P.4
Schatz, M.C.5
McCombie, W.R.6
-
13
-
-
0002271636
-
Nondisjunction mutants of the nematode caenorhabditis elegans
-
Hodgkin J, Horvitz HR, Brenner S. 1979. Nondisjunction mutants of the nematode Caenorhabditis elegans. Genetics 91: 67-94.
-
(1979)
Genetics
, vol.91
, pp. 67-94
-
-
Hodgkin, J.1
Horvitz, H.R.2
Brenner, S.3
-
14
-
-
84998996876
-
The oxford nanopore MinION: Delivery of nanopore sequencing to the genomics community
-
Jain M, Olsen HE, Paten B, Akeson M, Branton D, Daniel B, Deamer D, Andre M, Hagan B, Benner S, et al. 2016. The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community. Genome Biol 17: 239.
-
(2016)
Genome Biol
, vol.17
, pp. 239
-
-
Jain, M.1
Olsen, H.E.2
Paten, B.3
Akeson, M.4
Branton, D.5
Daniel, B.6
Deamer, D.7
Andre, M.8
Hagan, B.9
Benner, S.10
-
15
-
-
85020235714
-
Nanopore sequencing and assembly of a human genome with ultra-long reads
-
Jain M, Koren S, Quick J, Rand AC, Sasani TA, Tyson JR, Beggs AD, Dilthey AT, Fiddes IT, Malla S, et al. 2017. Nanopore sequencing and assembly of a human genome with ultra-long reads. bioRxiv doi: 10.1101/128835.
-
(2017)
BioRxiv
-
-
Jain, M.1
Koren, S.2
Quick, J.3
Rand, A.C.4
Sasani, T.A.5
Tyson, J.R.6
Beggs, A.D.7
Dilthey, A.T.8
Fiddes, I.T.9
Malla, S.10
-
16
-
-
85019066712
-
Canu: Scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
-
Koren S, Walenz BP, Berlin K, Miller JR, Bergman NH, Phillippy AM. 2017. Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation. Genome Res 27: 722-736.
-
(2017)
Genome Res
, vol.27
, pp. 722-736
-
-
Koren, S.1
Walenz, B.P.2
Berlin, K.3
Miller, J.R.4
Bergman, N.H.5
Phillippy, A.M.6
-
17
-
-
2942538300
-
Versatile and open software for comparing large genomes
-
Kurtz S, Phillippy A, Delcher AL, Smoot M, Shumway M, Antonescu C, Salzberg SL. 2004. Versatile and open software for comparing large genomes. Genome Biol 5: R12.
-
(2004)
Genome Biol
, vol.5
, pp. R12
-
-
Kurtz, S.1
Phillippy, A.2
Delcher, A.L.3
Smoot, M.4
Shumway, M.5
Antonescu, C.6
Salzberg, S.L.7
-
18
-
-
84948774105
-
Chromothripsis: A new mechanism for rapid karyotype evolution
-
Leibowitz ML, Zhang C-Z, Pellman D. 2015. Chromothripsis: a new mechanism for rapid karyotype evolution. AnnuRev Genet 49: 183-211.
-
(2015)
AnnuRev Genet
, vol.49
, pp. 183-211
-
-
Leibowitz, M.L.1
Zhang, C.-Z.2
Pellman, D.3
-
20
-
-
84930667103
-
Illumina synthetic long read sequencing allows recovery of missing sequences even in the "finished" C. Elegans genome
-
Li R, Hsieh C-L, Young A, Zhang Z, Ren X, Zhao Z. 2015. Illumina synthetic long read sequencing allows recovery of missing sequences even in the "finished" C. elegans genome. Sci Rep 5: 10814.
-
(2015)
Sci Rep
, vol.5
, pp. 10814
-
-
Li, R.1
Hsieh, C.-L.2
Young, A.3
Zhang, Z.4
Ren, X.5
Zhao, Z.6
-
21
-
-
84938421951
-
A complete bacterial genome assembled de novo using only nanopore sequencing data
-
Loman NJ, Quick J, Simpson JT. 2015. A complete bacterial genome assembled de novo using only nanopore sequencing data. Nat Methods 12: 733-735.
-
(2015)
Nat Methods
, vol.12
, pp. 733-735
-
-
Loman, N.J.1
Quick, J.2
Simpson, J.T.3
-
22
-
-
84959039248
-
Nanopore sequencing detects structural variants in cancer
-
Norris AL, Workman RE, Fan Y, Eshleman JR, Timp W. 2016. Nanopore sequencing detects structural variants in cancer. Cancer Biol Ther 17: 246-253.
-
(2016)
Cancer Biol Ther
, vol.17
, pp. 246-253
-
-
Norris, A.L.1
Workman, R.E.2
Fan, Y.3
Eshleman, J.R.4
Timp, W.5
-
23
-
-
0035099902
-
Creation of low-copy integrated transgenic lines in caenorhabditis elegans
-
Praitis V, Casey E, Collar D, Austin J. 2001. Creation of low-copy integrated transgenic lines in Caenorhabditis elegans. Genetics 157: 1217-1226.
-
(2001)
Genetics
, vol.157
, pp. 1217-1226
-
-
Praitis, V.1
Casey, E.2
Collar, D.3
Austin, J.4
-
24
-
-
84914689868
-
Pilon: An integrated tool for comprehensive microbial variant detection and genome assembly improvement
-
Walker BJ, Abeel T, Shea T, Priest M, Abouelliel A, Sakthikumar S, Cuomo CA, Zeng Q Wortman J, Young SK, et al. 2014. Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement. PLoS One 9: e112963.
-
(2014)
PLoS One
, vol.9
, pp. e112963
-
-
Walker, B.J.1
Abeel, T.2
Shea, T.3
Priest, M.4
Abouelliel, A.5
Sakthikumar, S.6
Cuomo, C.A.7
Zeng, Q.8
Wortman, J.9
Young, S.K.10
-
25
-
-
84953865446
-
Rapid short-read sequencing and aneuploidy detection using MinION nanopore technology
-
Wei S, Williams Z. 2016. Rapid short-read sequencing and aneuploidy detection using MinION nanopore technology. Genetics 202: 37-44.
-
(2016)
Genetics
, vol.202
, pp. 37-44
-
-
Wei, S.1
Williams, Z.2
-
26
-
-
33745407668
-
Homologous recombination is required for genome stability in the absence of DOG-1 in caenorhabditis elegans
-
Youds JL, ONeil NJ, Rose AM. 2006. Homologous recombination is required for genome stability in the absence of DOG-1 in Caenorhabditis elegans. Genetics 173: 697-708.
-
(2006)
Genetics
, vol.173
, pp. 697-708
-
-
Youds, J.L.1
O'Neil, N.J.2
Rose, A.M.3
-
27
-
-
38349187301
-
Poly-G/poly-C tracts in the genomes of caenorhabditis
-
Zhao Y, ONeil NJ, Rose AM. 2007. Poly-G/poly-C tracts in the genomes of Caenorhabditis. BMC Genomics 8: 403.
-
(2007)
BMC Genomics
, vol.8
, pp. 403
-
-
Zhao, Y.1
O'Neil, N.J.2
Rose, A.M.3
|