-
1
-
-
84893542053
-
An environmental bacterial taxon with a large and distinct metabolic repertoire
-
Wilson, M.C., Mori, T., Rückert, C., Uria, A.R., Helf, M.J., Takada, K., Gernert, C., Steffens, U.A.E., Heycke, N., Schmitt, S. et al. (2014) An environmental bacterial taxon with a large and distinct metabolic repertoire. Nature, 506, 58-62.
-
(2014)
Nature
, vol.506
, pp. 58-62
-
-
Wilson, M.C.1
Mori, T.2
Rückert, C.3
Uria, A.R.4
Helf, M.J.5
Takada, K.6
Gernert, C.7
Steffens, U.A.E.8
Heycke, N.9
Schmitt, S.10
-
2
-
-
84929329445
-
Complex archaea that bridge the gap between prokaryotes and eukaryotes
-
Spang, A., Saw, J.H., Jørgensen, S.L., Zaremba-Niedzwiedzka, K., Martijn, J., Lind, A.E., van Eijk, R., Schleper, C., Guy, L. and Ettema, T.J.G. (2015) Complex archaea that bridge the gap between prokaryotes and eukaryotes. Nature, 521, 173-179.
-
(2015)
Nature
, vol.521
, pp. 173-179
-
-
Spang, A.1
Saw, J.H.2
Jørgensen, S.L.3
Zaremba-Niedzwiedzka, K.4
Martijn, J.5
Lind, A.E.6
Van Eijk, R.7
Schleper, C.8
Guy, L.9
Ettema, T.J.G.10
-
3
-
-
85012284419
-
New CRISPR-Cas systems from uncultivated microbes
-
Burstein, D., Harrington, L.B., Strutt, S.C., Probst, A.J., Anantharaman, K., Thomas, B.C., Doudna, J.A. and Banfeld, J.F. (2017) New CRISPR-Cas systems from uncultivated microbes. Nature, 542, 237-241.
-
(2017)
Nature
, vol.542
, pp. 237-241
-
-
Burstein, D.1
Harrington, L.B.2
Strutt, S.C.3
Probst, A.J.4
Anantharaman, K.5
Thomas, B.C.6
Doudna, J.A.7
Banfeld, J.F.8
-
4
-
-
85010073180
-
Protein structure determination using metagenome sequence data
-
Ovchinnikov, S., Park, H., Varghese, N., Huang, P.-S., Pavlopoulos, G.A., Kim, D.E., Kamisetty, H., Kyrpides, N.C. and Baker, D. (2017) Protein structure determination using metagenome sequence data. Science, 355, 294-298.
-
(2017)
Science
, vol.355
, pp. 294-298
-
-
Ovchinnikov, S.1
Park, H.2
Varghese, N.3
Huang, P.-S.4
Pavlopoulos, G.A.5
Kim, D.E.6
Kamisetty, H.7
Kyrpides, N.C.8
Baker, D.9
-
5
-
-
84977496039
-
An expansion of rare lineage intestinal microbes characterizes rheumatoid arthritis
-
Chen, J., Wright, K., Davis, J.M., Jeraldo, P., Marietta, E.V., Murray, J., Nelson, H., Matteson, E.L. and Taneja, V. (2016) An expansion of rare lineage intestinal microbes characterizes rheumatoid arthritis. Genome Med., 8, 43.
-
(2016)
Genome Med.
, vol.8
, pp. 43
-
-
Chen, J.1
Wright, K.2
Davis, J.M.3
Jeraldo, P.4
Marietta, E.V.5
Murray, J.6
Nelson, H.7
Matteson, E.L.8
Taneja, V.9
-
6
-
-
85001930733
-
Gut microbiota regulate motor defcits and neuroinfammation in a model of Parkinson's disease
-
Sampson, T.R., Debelius, J.W., Thron, T., Janssen, S., Shastri, G.G., Ilhan, Z.E., Challis, C., Schretter, C.E., Rocha, S., Gradinaru, V. et al. (2016) Gut microbiota regulate motor defcits and neuroinfammation in a model of Parkinson's disease. Cell, 167, 1469-1480.
-
(2016)
Cell
, vol.167
, pp. 1469-1480
-
-
Sampson, T.R.1
Debelius, J.W.2
Thron, T.3
Janssen, S.4
Shastri, G.G.5
Ilhan, Z.E.6
Challis, C.7
Schretter, C.E.8
Rocha, S.9
Gradinaru, V.10
-
7
-
-
84858863014
-
Individual genome assembly from complex community short-read metagenomic datasets
-
Luo, C., Tsementzi, D., Kyrpides, N.C. and Konstantinidis, K.T. (2012) Individual genome assembly from complex community short-read metagenomic datasets. ISME J., 6, 898-901.
-
(2012)
ISME J.
, vol.6
, pp. 898-901
-
-
Luo, C.1
Tsementzi, D.2
Kyrpides, N.C.3
Konstantinidis, K.T.4
-
8
-
-
85022098159
-
290 metagenome-assembled genomes from the Mediterranean Sea: A resource for marine microbiology
-
Tully, B.J., Sachdeva, R., Graham, E.D. and Heidelberg, J.F. (2017) 290 metagenome-assembled genomes from the Mediterranean Sea: a resource for marine microbiology. Peer J., 5, e3558.
-
(2017)
Peer J.
, vol.5
, pp. e3558
-
-
Tully, B.J.1
Sachdeva, R.2
Graham, E.D.3
Heidelberg, J.F.4
-
9
-
-
84966701582
-
Metagenomics reveals pervasive bacterial populations and reduced community diversity across the Alaska Tundra Ecosystem
-
Johnston, E.R., Rodriguez-R, L.M., Luo, C., Yuan, M.M., Wu, L., He, Z., Schuur, E.A.G., Luo, Y., Tiedje, J.M., Zhou, J. et al. (2016) Metagenomics reveals pervasive bacterial populations and reduced community diversity across the Alaska Tundra Ecosystem. Front. Microbiol., 7, 579.
-
(2016)
Front. Microbiol.
, vol.7
, pp. 579
-
-
Johnston, E.R.1
Rodriguez-R, L.M.2
Luo, C.3
Yuan, M.M.4
Wu, L.5
He, Z.6
Schuur, E.A.G.7
Luo, Y.8
Tiedje, J.M.9
Zhou, J.10
-
10
-
-
85019133486
-
MetaSPAdes: A new versatile metagenomic assembler
-
Nurk, S., Meleshko, D., Korobeynikov, A. and Pevzner, P.A. (2017) metaSPAdes: a new versatile metagenomic assembler. Genome Res., 27, 824-834.
-
(2017)
Genome Res.
, vol.27
, pp. 824-834
-
-
Nurk, S.1
Meleshko, D.2
Korobeynikov, A.3
Pevzner, P.A.4
-
11
-
-
79952422304
-
Quality control and preprocessing of metagenomic datasets
-
Schmieder, R. and Edwards, R. (2011) Quality control and preprocessing of metagenomic datasets. Bioinformatics, 27, 863-864.
-
(2011)
Bioinformatics
, vol.27
, pp. 863-864
-
-
Schmieder, R.1
Edwards, R.2
-
12
-
-
78650812650
-
Benchmarking of gene prediction programs for metagenomic data
-
Yok, N. and Rosen, G. (2010) Benchmarking of gene prediction programs for metagenomic data. Conf. Proc. IEEE Eng. Med. Biol. Soc., 2010, 6190-6193.
-
(2010)
Conf. Proc. IEEE Eng. Med. Biol. Soc.
, vol.2010
, pp. 6190-6193
-
-
Yok, N.1
Rosen, G.2
-
13
-
-
78651326786
-
FragGeneScan: Predicting genes in short and error-prone reads
-
Rho, M., Tang, H. and Ye, Y. (2010) FragGeneScan: predicting genes in short and error-prone reads. Nucleic Acids Res., 38, e191.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. e191
-
-
Rho, M.1
Tang, H.2
Ye, Y.3
-
14
-
-
85009967892
-
Comparing and evaluating metagenome assembly tools from a microbiologist's perspective-not only size matters!
-
Vollmers, J., Wiegand, S. and Kaster, A.-K. (2017) Comparing and evaluating metagenome assembly tools from a microbiologist's perspective-not only size matters!. PLoS ONE, 12, e0169662.
-
(2017)
PLoS ONE
, vol.12
, pp. e0169662
-
-
Vollmers, J.1
Wiegand, S.2
Kaster, A.-K.3
-
15
-
-
84954556725
-
An evaluation of the accuracy and speed of metagenome analysis tools
-
Lindgreen, S., Adair, K.L. and Gardner, P.P. (2016) An evaluation of the accuracy and speed of metagenome analysis tools. Sci. Rep., 6, 19233.
-
(2016)
Sci. Rep.
, vol.6
, pp. 19233
-
-
Lindgreen, S.1
Adair, K.L.2
Gardner, P.P.3
-
16
-
-
85008395097
-
Assessment of common and emerging bioinformatics pipelines for targeted metagenomics
-
Siegwald, L., Touzet, H., Lemoine, Y., Hot, D., Audebert, C. and Caboche, S. (2017) Assessment of common and emerging bioinformatics pipelines for targeted metagenomics. PLoS ONE, 12, e0169563.
-
(2017)
PLoS ONE
, vol.12
, pp. e0169563
-
-
Siegwald, L.1
Touzet, H.2
Lemoine, Y.3
Hot, D.4
Audebert, C.5
Caboche, S.6
-
17
-
-
85020038934
-
Evaluating the accuracy of amplicon-based microbiome computational pipelines on simulated human gut microbial communities
-
Golob, J.L., Margolis, E., Hoffman, N.G. and Fredricks, D.N. (2017) Evaluating the accuracy of amplicon-based microbiome computational pipelines on simulated human gut microbial communities. BMC Bioinformatics, 18, 283.
-
(2017)
BMC Bioinformatics
, vol.18
, pp. 283
-
-
Golob, J.L.1
Margolis, E.2
Hoffman, N.G.3
Fredricks, D.N.4
-
18
-
-
53549118607
-
The metagenomics RAST server-A public resource for the automatic phylogenetic and functional analysis of metagenomes
-
Meyer, F., Paarmann, D., D'Souza, M., Olson, R., Glass, E.M., Kubal, M., Paczian, T., Rodriguez, A., Stevens, R., Wilke, A. et al. (2008) The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics, 9, 386.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 386
-
-
Meyer, F.1
Paarmann, D.2
D'Souza, M.3
Olson, R.4
Glass, E.M.5
Kubal, M.6
Paczian, T.7
Rodriguez, A.8
Stevens, R.9
Wilke, A.10
-
19
-
-
85016101571
-
IMG/M: Integrated genome and metagenome comparative data analysis system
-
Chen, I.-M.A., Markowitz, V.M., Chu, K., Palaniappan, K., Szeto, E., Pillay, M., Ratner, A., Huang, J., Andersen, E., Huntemann, M. et al. (2017) IMG/M: integrated genome and metagenome comparative data analysis system. Nucleic Acids Res., 45, D507-D516.
-
(2017)
Nucleic Acids Res.
, vol.45
, pp. D507-D516
-
-
Chen, I.-M.A.1
Markowitz, V.M.2
Chu, K.3
Palaniappan, K.4
Szeto, E.5
Pillay, M.6
Ratner, A.7
Huang, J.8
Andersen, E.9
Huntemann, M.10
-
20
-
-
84899518211
-
InterProScan 5: Genome-scale protein function classifcation
-
Jones, P., Binns, D., Chang, H.-Y., Fraser, M., Li, W., McAnulla, C., McWilliam, H., Maslen, J., Mitchell, A., Nuka, G. et al. (2014) InterProScan 5: genome-scale protein function classifcation. Bioinformatics, 30, 1236-1240.
-
(2014)
Bioinformatics
, vol.30
, pp. 1236-1240
-
-
Jones, P.1
Binns, D.2
Chang, H.-Y.3
Fraser, M.4
Li, W.5
McAnulla, C.6
McWilliam, H.7
Maslen, J.8
Mitchell, A.9
Nuka, G.10
-
21
-
-
84905049901
-
Trimmomatic: A fexible trimmer for Illumina sequence data
-
Bolger, A.M., Lohse, M. and Usadel, B. (2014) Trimmomatic: a fexible trimmer for Illumina sequence data. Bioinformatics, 30, 2114-2120.
-
(2014)
Bioinformatics
, vol.30
, pp. 2114-2120
-
-
Bolger, A.M.1
Lohse, M.2
Usadel, B.3
-
22
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso, J.G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F.D., Costello, E.K., Fierer, N., Peña, A.G., Goodrich, J.K., Gordon, J.I. et al. (2010) QIIME allows analysis of high-throughput community sequencing data. Nat. Methods, 7, 335-336.
-
(2010)
Nat. Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Peña, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
-
23
-
-
85040949451
-
Slim-o-matic: A semi-automated way to generate Gene Ontology slims
-
Courtot, M., Mitchell, A., Scheremetjew, M., Pinero, J., Furlong, L.I., Finn, R.D. and Parkinson, H. (2016) Slim-o-matic: a semi-automated way to generate Gene Ontology slims. SWAT4LS, 2016.
-
(2016)
SWAT4LS
, vol.2016
-
-
Courtot, M.1
Mitchell, A.2
Scheremetjew, M.3
Pinero, J.4
Furlong, L.I.5
Finn, R.D.6
Parkinson, H.7
-
24
-
-
0034069495
-
Gene ontology: Tool for the unifcation of biology. The Gene Ontology Consortium
-
Ashburner, M., Ball, C.A., Blake, J.A., Botstein, D., Butler, H., Cherry, J.M., Davis, A.P., Dolinski, K., Dwight, S.S., Eppig, J.T. et al. (2000) Gene ontology: tool for the unifcation of biology. The Gene Ontology Consortium. Nat. Genet., 25, 25-29.
-
(2000)
Nat. Genet.
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
-
25
-
-
80052290460
-
RRNASelector: A computer program for selecting ribosomal RNA encoding sequences from metagenomic and metatranscriptomic shotgun libraries
-
Lee, J.-H., Yi, H. and Chun, J. (2011) rRNASelector: a computer program for selecting ribosomal RNA encoding sequences from metagenomic and metatranscriptomic shotgun libraries. J. Microbiol., 49, 689-691.
-
(2011)
J. Microbiol.
, vol.49
, pp. 689-691
-
-
Lee, J.-H.1
Yi, H.2
Chun, J.3
-
26
-
-
84890037468
-
Infernal 1.1: 100-fold faster RNA homology searches
-
Nawrocki, E.P. and Eddy, S.R. (2013) Infernal 1.1: 100-fold faster RNA homology searches. Bioinformatics, 29, 2933-2935.
-
(2013)
Bioinformatics
, vol.29
, pp. 2933-2935
-
-
Nawrocki, E.P.1
Eddy, S.R.2
-
27
-
-
84946094179
-
Rfam 12.0: Updates to the RNA families database
-
Nawrocki, E.P., Burge, S.W., Bateman, A., Daub, J., Eberhardt, R.Y, Eddy, S.R., Floden, E.W., Gardner, P.P., Jones, T.A., Tate, J. et al. (2015) Rfam 12.0: updates to the RNA families database. Nucleic Acids Res., 43, D130-D137.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D130-D137
-
-
Nawrocki, E.P.1
Burge, S.W.2
Bateman, A.3
Daub, J.4
Eberhardt, R.Y.5
Eddy, S.R.6
Floden, E.W.7
Gardner, P.P.8
Jones, T.A.9
Tate, J.10
-
28
-
-
85040920865
-
MAPseq: Highly effcient k-mer search with confdence estimates, for rRNA sequence analysis
-
Matias Rodrigues, J.F., Schmidt, T.S.B., Tackmann, J. and von Mering, C. (2017) MAPseq: highly effcient k-mer search with confdence estimates, for rRNA sequence analysis. Bioinformatics, doi:10.1093/bioinformatics/btx517.
-
(2017)
Bioinformatics
-
-
Matias Rodrigues, J.F.1
Schmidt, T.S.B.2
Tackmann, J.3
Von Mering, C.4
-
29
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
DeSantis, T.Z., Hugenholtz, P., Larsen, N., Rojas, M., Brodie, E.L., Keller, K., Huber, T., Dalevi, D., Hu, P and Andersen, G.L. (2006) Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl. Environ. Microbiol., 72, 5069-5072.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
Huber, T.7
Dalevi, D.8
Hu, P.9
Andersen, G.L.10
-
30
-
-
84873739311
-
The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools
-
Quast, C, Pruesse, E., Yilmaz, P, Gerken, J., Schweer, T., Yarza, P, Peplies, J. and Glöckner, F.O. (2013) The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res., 41, D590-D596.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. D590-D596
-
-
Quast, C.1
Pruesse, E.2
Yilmaz, P.3
Gerken, J.4
Schweer, T.5
Yarza, P.6
Peplies, J.7
Glöckner, F.O.8
-
31
-
-
77952299957
-
Prodigal: Prokaryotic gene recognition and translation initiation site identifcation
-
Hyatt, D., Chen, G-L., Locascio, PF., Land, M.L., Larimer, F.W. and Hauser, L.J. (2010) Prodigal: prokaryotic gene recognition and translation initiation site identifcation. BMC Bioinformatics, 11, 119.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 119
-
-
Hyatt, D.1
Chen, G.-L.2
Locascio, P.F.3
Land, M.L.4
Larimer, F.W.5
Hauser, L.J.6
-
32
-
-
85023199703
-
The EBI search engine: EBI search as a service-making biological data accessible for all
-
Park, YM., Squizzato, S., Buso, N, Gur, T. and Lopez, R. (2017) The EBI search engine: EBI search as a service-making biological data accessible for all. Nucleic Acids Res., 45, W545-W549.
-
(2017)
Nucleic Acids Res.
, vol.45
, pp. W545-W549
-
-
Park, Y.M.1
Squizzato, S.2
Buso, N.3
Gur, T.4
Lopez, R.5
-
33
-
-
84924629414
-
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
-
Love, M.I., Huber, W. and Anders, S. (2014) Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol, 15, 550.
-
(2014)
Genome Biol
, vol.15
, pp. 550
-
-
Love, M.I.1
Huber, W.2
Anders, S.3
-
34
-
-
84876427223
-
Phyloseq: An R package for reproducible interactive analysis and graphics of microbiome census data
-
McMurdie, PJ. and Holmes, S. (2013) phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data. PLoS ONE, 8, e61217.
-
(2013)
PLoS ONE
, vol.8
, pp. e61217
-
-
McMurdie, P.J.1
Holmes, S.2
-
35
-
-
84929626808
-
MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
-
Li, D., Liu, C.-M., Luo, R., Sadakane, K. and Lam, T-W. (2015) MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph. Bioinformatics, 31, 1674-1676.
-
(2015)
Bioinformatics
, vol.31
, pp. 1674-1676
-
-
Li, D.1
Liu, C.-M.2
Luo, R.3
Sadakane, K.4
Lam, T.-W.5
-
36
-
-
84883784774
-
Space-effcient and exact de Bruijn graph representation based on a Bloom flter
-
Chikhi, R. and Rizk, G. (2013) Space-effcient and exact de Bruijn graph representation based on a Bloom flter. Algorithms Mol. Biol., 8, 22.
-
(2013)
Algorithms Mol. Biol.
, vol.8
, pp. 22
-
-
Chikhi, R.1
Rizk, G.2
-
37
-
-
84865741828
-
The Human Microbiome Project: A community resource for the healthy human microbiome
-
Gevers, D., Knight, R., Petrosino, J.F., Huang, K., McGuire, A.L., Birren, B.W., Nelson, K.E., White, O., Methé, B.A. and Huttenhower, C. (2012) The Human Microbiome Project: a community resource for the healthy human microbiome. PLoS Biol., 10, e1001377.
-
(2012)
PLoS Biol.
, vol.10
, pp. e1001377
-
-
Gevers, D.1
Knight, R.2
Petrosino, J.F.3
Huang, K.4
McGuire, A.L.5
Birren, B.W.6
Nelson, K.E.7
White, O.8
Methé, B.A.9
Huttenhower, C.10
-
38
-
-
85016153986
-
UniProt: The universal protein knowledgebase
-
The UniProt Consortium (2017) UniProt: the universal protein knowledgebase. Nucleic Acids Res., 45, D158-D169.
-
(2017)
Nucleic Acids Res.
, vol.45
, pp. D158-D169
-
-
-
39
-
-
84941349095
-
HMMER web server: 2015 update
-
Finn, R.D., Clements, J., Arndt, W., Miller, B.L., Wheeler, T.J., Schreiber, F., Bateman, A. and Eddy, S.R. (2015) HMMER web server: 2015 update. Nucleic Acids Res., 43, W30-W38.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. W30-W38
-
-
Finn, R.D.1
Clements, J.2
Arndt, W.3
Miller, B.L.4
Wheeler, T.J.5
Schreiber, F.6
Bateman, A.7
Eddy, S.R.8
-
40
-
-
79955749319
-
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifcations
-
Yilmaz, P., Kottmann, R., Field, D., Knight, R., Cole, J.R., Amaral-Zettler, L., Gilbert, J.A., Karsch-Mizrachi, I., Johnston, A., Cochrane, G. et al. (2011) Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifcations. Nat. Biotechnol., 29, 415-420.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 415-420
-
-
Yilmaz, P.1
Kottmann, R.2
Field, D.3
Knight, R.4
Cole, J.R.5
Amaral-Zettler, L.6
Gilbert, J.A.7
Karsch-Mizrachi, I.8
Johnston, A.9
Cochrane, G.10
-
41
-
-
84976870063
-
The International Nucleotide Sequence Database Collaboration
-
Cochrane, G., Karsch-Mizrachi, I., Takagi, T. and International Nucleotide Sequence Database Collaboration (2016) The International Nucleotide Sequence Database Collaboration. Nucleic Acids Res., 44, D48-D50.
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. D48-D50
-
-
Cochrane, G.1
Karsch-Mizrachi, I.2
Takagi, T.3
-
42
-
-
84891822499
-
EBI metagenomics-A new resource for the analysis and archiving of metagenomic data
-
Hunter, S., Corbett, M., Denise, H., Fraser, M., Gonzalez-Beltran, A., Hunter, C., Jones, P., Leinonen, R., McAnulla, C., Maguire, E. et al. (2014) EBI metagenomics-a new resource for the analysis and archiving of metagenomic data. Nucleic Acids Res., 42, D600-D606.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. D600-D606
-
-
Hunter, S.1
Corbett, M.2
Denise, H.3
Fraser, M.4
Gonzalez-Beltran, A.5
Hunter, C.6
Jones, P.7
Leinonen, R.8
McAnulla, C.9
Maguire, E.10
-
43
-
-
85016141786
-
InterPro in 2017-beyond protein family and domain annotations
-
Finn, R.D., Attwood, T.K., Babbitt, P.C., Bateman, A., Bork, P., Bridge, A.J., Chang, H.-Y., Dosztányi, Z., El-Gebali, S., Fraser, M. et al. (2017) InterPro in 2017-beyond protein family and domain annotations. Nucleic Acids Res., 45, D190-D199.
-
(2017)
Nucleic Acids Res.
, vol.45
, pp. D190-D199
-
-
Finn, R.D.1
Attwood, T.K.2
Babbitt, P.C.3
Bateman, A.4
Bork, P.5
Bridge, A.J.6
Chang, H.-Y.7
Dosztányi, Z.8
El-Gebali, S.9
Fraser, M.10
-
44
-
-
85014768147
-
Interactive tree of life (iTOL) v3: An online tool for the display and annotation of phylogenetic and other trees
-
Letunic, I. and Bork, P. (2016) Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees. Nucleic Acids Res., 44, W242-W245.
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. W242-W245
-
-
Letunic, I.1
Bork, P.2
|