메뉴 건너뛰기




Volumn 46, Issue D1, 2018, Pages D661-D667

WikiPathways: A multifaceted pathway database bridging metabolomics to other omics research

(22)  Slenter, Denise N a   Kutmon, Martina a   Hanspers, Kristina b   Riutta, Anders b   Windsor, Jacob a   Nunes, Nuno a   Mélius, Jonathan a   Cirillo, Elisa a   Coort, Susan L a   DIgles, Daniela c   Ehrhart, Friederike a   Giesbertz, Pieter d   Kalafati, Marianthi a   Martens, Marvin a   Miller, Ryan a   Nishida, Kozo e   Rieswijk, Linda f   Waagmeester, Andra a,g   Eijssen, Lars M T a,h   Evelo, Chris T a   more..


Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOLOGY; CHEMISTRY; COMPUTER AIDED DESIGN; DATA BASE; DATA MINING; INTERNET; METABOLITE; METABOLOMICS; ONLINE SYSTEM; PRIORITY JOURNAL; QUALITY CONTROL; RESEARCH; SOFTWARE; ANIMAL; CHEMICAL DATABASE; GENETIC DATABASE; HUMAN; INFORMATION PROCESSING; METABOLISM; SEARCH ENGINE; STANDARDS;

EID: 85040865212     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkx1064     Document Type: Article
Times cited : (687)

References (33)
  • 2
    • 84881234211 scopus 로고    scopus 로고
    • WikiPathways for plants: A community pathwaycuration portal and a case study in rice and arabidopsis seeddevelopment networks
    • Hanumappa, M., Preece, J., Elser, J., Nemeth, D., Bono, G., Wu, K. andJaiswal, P. (2013) WikiPathways for plants: A community pathwaycuration portal and a case study in rice and arabidopsis seeddevelopment networks. Rice, 6, 14.
    • (2013) Rice , vol.6 , pp. 14
    • Hanumappa, M.1    Preece, J.2    Elser, J.3    Nemeth, D.4    Bono, G.5    Wu, K.6    Jaiswal, P.7
  • 8
    • 84876008750 scopus 로고    scopus 로고
    • TheConsensusPathDB interaction database: 2013 update
    • Kamburov, A., Stelzl, U., Lehrach, H., Herwig, R. (2013) TheConsensusPathDB interaction database: 2013 update. Nucleic AcidsRes., 41, D793-D800.
    • (2013) Nucleic AcidsRes. , vol.41 , pp. D793-D800
    • Kamburov, A.1    Stelzl, U.2    Lehrach, H.3    Herwig, R.4
  • 9
    • 77957684689 scopus 로고    scopus 로고
    • Biotransformation pathway maps inWikiPathways enable direct visualization of drug metabolism relatedexpression changes
    • Jennen, D.G., Gaj, S., Giesbertz, P.J., van Delft, J.H., Evelo, C.T. andKleinjans, J.C. (2010) Biotransformation pathway maps inWikiPathways enable direct visualization of drug metabolism relatedexpression changes. Drug Discov. Today, 15, 851-858.
    • (2010) Drug Discov. Today , vol.15 , pp. 851-858
    • Jennen, D.G.1    Gaj, S.2    Giesbertz, P.J.3    Van Delft, J.H.4    Evelo, C.T.5    Kleinjans, J.C.6
  • 10
    • 84979657059 scopus 로고    scopus 로고
    • Integration of targeted metabolomics and transcriptomicsidentifies deregulation of phosphatidylcholine metabolism inHuntington's disease peripheral blood samples
    • Mastrokolias, A., Pool, R., Mina, E., Hettne, K., van Duijn, E., van derMast, R., van Ommen, G., 't Hoen, P., Prehn, C., Adamski, J., et al.(2016) Integration of targeted metabolomics and transcriptomicsidentifies deregulation of phosphatidylcholine metabolism inHuntington's disease peripheral blood samples. Metabolomics, 12, 137.
    • (2016) Metabolomics , vol.12 , pp. 137
    • Mastrokolias, A.1    Pool, R.2    Mina, E.3    Hettne, K.4    Van Duijn, E.5    Van DerMast, R.6    Van Ommen, G.7    Thoen, P.8    Prehn, C.9    Adamski, J.10
  • 12
    • 85015275888 scopus 로고    scopus 로고
    • Bayesian model of signalrewiring reveals mechanisms of gene dysregulation in acquired drugresistance in breast cancer
    • Azad, A., Lawen, A., Keith, J.M. (2017) Bayesian model of signalrewiring reveals mechanisms of gene dysregulation in acquired drugresistance in breast cancer. PLoS ONE, 12, e0173331.
    • (2017) PLoS ONE , vol.12 , pp. e0173331
    • Azad, A.1    Lawen, A.2    Keith, J.M.3
  • 16
    • 84985918208 scopus 로고    scopus 로고
    • The metabolome 18 years on: Aconcept comes of age
    • Kell, D.B., Oliver, S.G. (2016) The metabolome 18 years on: Aconcept comes of age. Metabolomics, 12, 148.
    • (2016) Metabolomics , vol.12 , pp. 148
    • Kell, D.B.1    Oliver, S.G.2
  • 23
    • 84949178013 scopus 로고    scopus 로고
    • Multivariate analysis of analytical chemistry data and utility of theKNApSAcK family database to understand metabolic diversity inmedicinal plants
    • Springer
    • Okada, T., Afendi, F.M., Katoh, A., Hirai, A., Kanaya, S. (2013)Multivariate analysis of analytical chemistry data and utility of theKNApSAcK family database to understand metabolic diversity inmedicinal plants. In: Biotechnology for Medicinal Plants. Springer, pp. 413-438.
    • (2013) Biotechnology for Medicinal Plants , pp. 413-438
    • Okada, T.1    Afendi, F.M.2    Katoh, A.3    Hirai, A.4    Kanaya, S.5
  • 25
    • 85006337290 scopus 로고    scopus 로고
    • Identifying knownunknowns using the US EPA's CompTox Chemistry Dashboard
    • McEachran, A., Sobus, J., Williams, A. (2017) Identifying knownunknowns using the US EPA's CompTox Chemistry Dashboard.Anal. Bioanal. Chem., 409, 1729-1735.
    • (2017) Anal. Bioanal. Chem. , vol.409 , pp. 1729-1735
    • McEachran, A.1    Sobus, J.2    Williams, A.3
  • 26
    • 84857876341 scopus 로고    scopus 로고
    • Mining and integration ofpathway diagrams from imaging data
    • Kozhenkov, S., Baitaluk, M. (2012) Mining and integration ofpathway diagrams from imaging data. Bioinformatics, 28, 739-742.
    • (2012) Bioinformatics , vol.28 , pp. 739-742
    • Kozhenkov, S.1    Baitaluk, M.2
  • 27
    • 79959988943 scopus 로고    scopus 로고
    • BioPortal: Enhancedfunctionality via new Web services from the National Center forBiomedical Ontology to access and use ontologies in softwareapplications
    • Whetzel, P.L., Noy, N.F., Shah, N.H., Alexander, P.R., Nyulas, C., Tudorache, T., Musen, M.A. (2011) BioPortal: Enhancedfunctionality via new Web services from the National Center forBiomedical Ontology to access and use ontologies in softwareapplications. Nucleic Acids Res., 39, W541-W545.
    • (2011) Nucleic Acids Res. , vol.39 , pp. W541-W545
    • Whetzel, P.L.1    Noy, N.F.2    Shah, N.H.3    Alexander, P.R.4    Nyulas, C.5    Tudorache, T.6    Musen, M.A.7
  • 28
    • 84915746374 scopus 로고    scopus 로고
    • WikiPathways App for Cytoscape: Making biological pathwaysamenable to network analysis and visualization [version 2; Referees: 2approved]
    • Kutmon, M., Lotia, S., Evelo, C.T., Pico, A.R. (2014)WikiPathways App for Cytoscape: Making biological pathwaysamenable to network analysis and visualization [version 2; referees: 2approved]. F1000Research, 3, 152.
    • (2014) F1000Research , vol.3 , pp. 152
    • Kutmon, M.1    Lotia, S.2    Evelo, C.T.3    Pico, A.R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.