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Volumn 16, Issue 1, 2017, Pages

Biosensor-aided high-throughput screening of hyper-producing cells for malonyl-CoA-derived products

Author keywords

High throughput screening; Malonyl CoA; Phloroglucinol; Triacetic acid lactone; Whole cell biosensor

Indexed keywords

FATTY ACID; IRON; MALONYL COENZYME A; PHLOROGLUCINOL; POLYKETIDE; TRIACETIC ACID LACTONE; UNCLASSIFIED DRUG; PYRONE DERIVATIVE;

EID: 85032745920     PISSN: None     EISSN: 14752859     Source Type: Journal    
DOI: 10.1186/s12934-017-0794-6     Document Type: Article
Times cited : (20)

References (44)
  • 3
    • 33645392725 scopus 로고    scopus 로고
    • Biosynthesis of pipecolic acid by RapL, a lysine cyclodeaminase encoded in the rapamycin gene cluster
    • Gatto GJ, Boyne MT, Kelleher NL, Walsh CT. Biosynthesis of pipecolic acid by RapL, a lysine cyclodeaminase encoded in the rapamycin gene cluster. J Am Chem Soc. 2006;128:3838-47.
    • (2006) J Am Chem Soc , vol.128 , pp. 3838-3847
    • Gatto, G.J.1    Boyne, M.T.2    Kelleher, N.L.3    Walsh, C.T.4
  • 4
    • 84871324576 scopus 로고    scopus 로고
    • Airborne allergic contact dermatitis from tylosin in pharmacy compounders and cross-sensitization to macrolide antibiotics
    • Malaiyandi V, Houle MC, Skotnickigrant S. Airborne allergic contact dermatitis from tylosin in pharmacy compounders and cross-sensitization to macrolide antibiotics. Dermatitis. 2012;23:227-30.
    • (2012) Dermatitis , vol.23 , pp. 227-230
    • Malaiyandi, V.1    Houle, M.C.2    Skotnickigrant, S.3
  • 6
    • 85017657564 scopus 로고    scopus 로고
    • A novel synthetic pathway enables microbial production of polyphenols independent from the endogenous aromatic amino acid metabolism
    • Kallscheuer N, Vogt M, Marienhagen J. A novel synthetic pathway enables microbial production of polyphenols independent from the endogenous aromatic amino acid metabolism. ACS Synth Biol. 2016;6:410-5.
    • (2016) ACS Synth Biol , vol.6 , pp. 410-415
    • Kallscheuer, N.1    Vogt, M.2    Marienhagen, J.3
  • 7
    • 84961113267 scopus 로고    scopus 로고
    • Recent progress in therapeutic natural product biosynthesis using Escherichia coli
    • Ahmadi MK, Pfeifer BA. Recent progress in therapeutic natural product biosynthesis using Escherichia coli. Curr Opin Biotechnol. 2016;42:7-12.
    • (2016) Curr Opin Biotechnol , vol.42 , pp. 7-12
    • Ahmadi, M.K.1    Pfeifer, B.A.2
  • 8
    • 34250849659 scopus 로고    scopus 로고
    • Engineering central metabolic pathways for high-level flavonoid production in Escherichia coli
    • Leonard E, Lim KH, Saw PN, Koffas MA. Engineering central metabolic pathways for high-level flavonoid production in Escherichia coli. Appl Environ Microbiol. 2007;73:3877-86.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 3877-3886
    • Leonard, E.1    Lim, K.H.2    Saw, P.N.3    Koffas, M.A.4
  • 9
    • 63649137435 scopus 로고    scopus 로고
    • Improving cellular malonyl-CoA level in Escherichia coli via metabolic engineering
    • Zha W, Rubin-Pitel SB, Shao Z, Zhao H. Improving cellular malonyl-CoA level in Escherichia coli via metabolic engineering. Metab Eng. 2009;11:192-8.
    • (2009) Metab Eng , vol.11 , pp. 192-198
    • Zha, W.1    Rubin-Pitel, S.B.2    Shao, Z.3    Zhao, H.4
  • 10
    • 8044240279 scopus 로고    scopus 로고
    • Competition between beta-ketothiolase and citrate synthase during poly(beta-hydroxybutyrate) synthesis in Methylobacterium rhodesianum
    • Mothes GR, Rivera IS, Babel W. Competition between beta-ketothiolase and citrate synthase during poly(beta-hydroxybutyrate) synthesis in Methylobacterium rhodesianum. Arch Microbiol. 1996;166:405-10.
    • (1996) Arch Microbiol , vol.166 , pp. 405-410
    • Mothes, G.R.1    Rivera, I.S.2    Babel, W.3
  • 11
    • 0032878549 scopus 로고    scopus 로고
    • The regulation of acetyl-CoA carboxylase-a potential target for the action of hypolipidemic agents
    • Munday MR, Hemingway CJ. The regulation of acetyl-CoA carboxylase-a potential target for the action of hypolipidemic agents. Adv Enzyme Regul. 1999;39:205-34.
    • (1999) Adv Enzyme Regul , vol.39 , pp. 205-234
    • Munday, M.R.1    Hemingway, C.J.2
  • 12
    • 0034666431 scopus 로고    scopus 로고
    • Overproduction of acetyl-CoA carboxylase activity increases the rate of fatty acid biosynthesis in Escherichia coli
    • Davis MS, Solbiati J, Cronan JE Jr. Overproduction of acetyl-CoA carboxylase activity increases the rate of fatty acid biosynthesis in Escherichia coli. J Biol Chem. 2000;275:28593-8.
    • (2000) J Biol Chem , vol.275 , pp. 28593-28598
    • Davis, M.S.1    Solbiati, J.2    Cronan, J.E.3
  • 13
    • 84869122829 scopus 로고    scopus 로고
    • Engineering Escherichia coli to synthesize free fatty acids
    • Lennen RM, Pfleger BF. Engineering Escherichia coli to synthesize free fatty acids. Trends Biotechnol. 2012;30:659-67.
    • (2012) Trends Biotechnol , vol.30 , pp. 659-667
    • Lennen, R.M.1    Pfleger, B.F.2
  • 14
    • 84857449564 scopus 로고    scopus 로고
    • Production of 3-hydroxypropionic acid via malonyl-CoA pathway using recombinant Escherichia coli strains
    • Rathnasingh C, Raj SM, Lee Y, Catherine C, Ashok S, Park S. Production of 3-hydroxypropionic acid via malonyl-CoA pathway using recombinant Escherichia coli strains. J Biotechnol. 2011;157:633-40.
    • (2011) J Biotechnol , vol.157 , pp. 633-640
    • Rathnasingh, C.1    Raj, S.M.2    Lee, Y.3    Catherine, C.4    Ashok, S.5    Park, S.6
  • 15
    • 0021716027 scopus 로고
    • Error-prone mutagenesis detected in mammalian cells by a shuttle vector containing the supf gene of Escherichia coli
    • Sarkar S, Dasgupta UB, Summers WC. Error-prone mutagenesis detected in mammalian cells by a shuttle vector containing the supf gene of Escherichia coli. Mol Cell Biol. 1984;4:2227-30.
    • (1984) Mol Cell Biol , vol.4 , pp. 2227-2230
    • Sarkar, S.1    Dasgupta, U.B.2    Summers, W.C.3
  • 16
    • 34249989455 scopus 로고    scopus 로고
    • Simultaneous quantification of malonyl-CoA and several other short-chain acyl-CoAs in animal tissues by ion-pairing reversed-phase HPLC/MS
    • Gao L, Chiou W, Tang H, Cheng XH, Camp HS, Burns DJ. Simultaneous quantification of malonyl-CoA and several other short-chain acyl-CoAs in animal tissues by ion-pairing reversed-phase HPLC/MS. J Chromatogr B. 2007;853:303-13.
    • (2007) J Chromatogr B , vol.853 , pp. 303-313
    • Gao, L.1    Chiou, W.2    Tang, H.3    Cheng, X.H.4    Camp, H.S.5    Burns, D.J.6
  • 17
    • 84879999713 scopus 로고    scopus 로고
    • Screening for enhanced triacetic acid lactone production by recombinant Escherichia coli expressing a designed triacetic acid lactone reporter
    • Tang SY, Qian S, Akinterinwa O, Frei CS, Gredell JA, Cirino PC. Screening for enhanced triacetic acid lactone production by recombinant Escherichia coli expressing a designed triacetic acid lactone reporter. J Am Chem Soc. 2013;135:10099-103.
    • (2013) J Am Chem Soc , vol.135 , pp. 10099-10103
    • Tang, S.Y.1    Qian, S.2    Akinterinwa, O.3    Frei, C.S.4    Gredell, J.A.5    Cirino, P.C.6
  • 18
    • 0032490937 scopus 로고    scopus 로고
    • Triclosan targets lipid synthesis
    • Mcmurry LM, Oethinger M, Levy SB. Triclosan targets lipid synthesis. Nature. 1998;394:531-2.
    • (1998) Nature , vol.394 , pp. 531-532
    • Mcmurry, L.M.1    Oethinger, M.2    Levy, S.B.3
  • 19
    • 0035126479 scopus 로고    scopus 로고
    • Triclosan offers protection against blood stages of malaria by inhibiting enoyl-ACP reductase of Plasmodium falciparum
    • Surolia N, Surolia A. Triclosan offers protection against blood stages of malaria by inhibiting enoyl-ACP reductase of Plasmodium falciparum. Nat Med. 2001;7:167-73.
    • (2001) Nat Med , vol.7 , pp. 167-173
    • Surolia, N.1    Surolia, A.2
  • 20
    • 0032414254 scopus 로고    scopus 로고
    • Transmembrane signaling across the ligand-gated FhuA receptor: crystal structures of free and ferrichrome-bound states reveal allosteric changes
    • Locher KP, Rees B, Koebnik R, Mitschler A, Moulinier L, Rosenbusch JP, Moras D. Transmembrane signaling across the ligand-gated FhuA receptor: crystal structures of free and ferrichrome-bound states reveal allosteric changes. Cell. 1998;95:771-8.
    • (1998) Cell , vol.95 , pp. 771-778
    • Locher, K.P.1    Rees, B.2    Koebnik, R.3    Mitschler, A.4    Moulinier, L.5    Rosenbusch, J.P.6    Moras, D.7
  • 21
    • 52949102566 scopus 로고    scopus 로고
    • TonB induces conformational changes in surface-exposed loops of FhuA, outer membrane receptor of Escherichia coli
    • James K, Hancock MA, Moreau V, Molina F, Coulton J. TonB induces conformational changes in surface-exposed loops of FhuA, outer membrane receptor of Escherichia coli. Protein Sci. 2008;17:1679-88.
    • (2008) Protein Sci , vol.17 , pp. 1679-1688
    • James, K.1    Hancock, M.A.2    Moreau, V.3    Molina, F.4    Coulton, J.5
  • 22
    • 0030465238 scopus 로고    scopus 로고
    • Superoxide accelerates DNA damage by elevating free-iron levels
    • Keyer K, Imlay JA. Superoxide accelerates DNA damage by elevating free-iron levels. Proc Natl Acad Sci USA. 1996;93:13635-40.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 13635-13640
    • Keyer, K.1    Imlay, J.A.2
  • 23
    • 33845968510 scopus 로고    scopus 로고
    • Characterization of the substrate specificity of PhlD, a type III polyketide synthase from Pseudomonas fluorescens
    • Zha W, Rubinpitel SB, Zhao H. Characterization of the substrate specificity of PhlD, a type III polyketide synthase from Pseudomonas fluorescens. J Biol Chem. 2006;281:32036.
    • (2006) J Biol Chem , vol.281 , pp. 32036
    • Zha, W.1    Rubinpitel, S.B.2    Zhao, H.3
  • 24
    • 0026446522 scopus 로고
    • Fumarase A from Escherichia coli-purification and characterization as an iron sulfur cluster containing enzyme
    • Flint DH, Emptage MH, Guest JR. Fumarase A from Escherichia coli-purification and characterization as an iron sulfur cluster containing enzyme. Biochemistry. 1992;31:10331-7.
    • (1992) Biochemistry , vol.31 , pp. 10331-10337
    • Flint, D.H.1    Emptage, M.H.2    Guest, J.R.3
  • 25
    • 0032739921 scopus 로고    scopus 로고
    • Direct evidence for mRNA binding and post-transcriptional regulation by Escherichia coli aconitases
    • Tang Y, Guest JR. Direct evidence for mRNA binding and post-transcriptional regulation by Escherichia coli aconitases. Microbiology. 1999;145:3069-79.
    • (1999) Microbiology , vol.145 , pp. 3069-3079
    • Tang, Y.1    Guest, J.R.2
  • 26
    • 0037007078 scopus 로고    scopus 로고
    • A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli
    • Masse E, Gottesman S. A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli. Proc Natl Acad Sci USA. 2002;99:4620-5.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 4620-4625
    • Masse, E.1    Gottesman, S.2
  • 27
    • 0038392248 scopus 로고    scopus 로고
    • Variation in proton donor/acceptor pathways in succinate:quinone oxidoreductases
    • Cecchini G, Maklashina E, Yankovskaya V, Iverson TM, Iwata S. Variation in proton donor/acceptor pathways in succinate:quinone oxidoreductases. FEBS Lett. 2003;545:31-8.
    • (2003) FEBS Lett , vol.545 , pp. 31-38
    • Cecchini, G.1    Maklashina, E.2    Yankovskaya, V.3    Iverson, T.M.4    Iwata, S.5
  • 29
    • 0032925895 scopus 로고    scopus 로고
    • Escherichia coli RcsA, a positive activator of colanic acid capsular polysaccharide synthesis, functions to activate its own expression
    • Ebel W, Trempy JE. Escherichia coli RcsA, a positive activator of colanic acid capsular polysaccharide synthesis, functions to activate its own expression. J Bacteriol. 1999;181:577-84.
    • (1999) J Bacteriol , vol.181 , pp. 577-584
    • Ebel, W.1    Trempy, J.E.2
  • 31
    • 84945270373 scopus 로고    scopus 로고
    • Development of a synthetic malonyl-CoA sensor in Saccharomyces cerevisiae for intracellular metabolite monitoring and genetic screening
    • Li SJ, Si T, Wang M, Zhao HM. Development of a synthetic malonyl-CoA sensor in Saccharomyces cerevisiae for intracellular metabolite monitoring and genetic screening. ACS Synth Biol. 2015;4:1308-15.
    • (2015) ACS Synth Biol , vol.4 , pp. 1308-1315
    • Li, S.J.1    Si, T.2    Wang, M.3    Zhao, H.M.4
  • 32
    • 84905668376 scopus 로고    scopus 로고
    • Improving fatty acids production by engineering dynamic pathway regulation and metabolic control
    • Xu P, Li LY, Zhang FM, Stephanopoulos G, Koffas M. Improving fatty acids production by engineering dynamic pathway regulation and metabolic control. Proc Natl Acad Sci USA. 2014;111:11299-304.
    • (2014) Proc Natl Acad Sci USA , vol.111 , pp. 11299-11304
    • Xu, P.1    Li, L.Y.2    Zhang, F.M.3    Stephanopoulos, G.4    Koffas, M.5
  • 33
    • 84961778420 scopus 로고    scopus 로고
    • Flux control at the malonyl-CoA node through hierarchical dynamic pathway regulation in Saccharomyces cerevisiae
    • David F, Nielsen J, Siewers V. Flux control at the malonyl-CoA node through hierarchical dynamic pathway regulation in Saccharomyces cerevisiae. ACS Synth Biol. 2016;5:224-33.
    • (2016) ACS Synth Biol , vol.5 , pp. 224-233
    • David, F.1    Nielsen, J.2    Siewers, V.3
  • 34
    • 84924239544 scopus 로고    scopus 로고
    • Negative feedback regulation of fatty acid production based on a malonyl-CoA sensor-actuator
    • Liu D, Xiao Y, Evans BS, Zhang FZ. Negative feedback regulation of fatty acid production based on a malonyl-CoA sensor-actuator. ACS Synth Biol. 2015;4:132-40.
    • (2015) ACS Synth Biol , vol.4 , pp. 132-140
    • Liu, D.1    Xiao, Y.2    Evans, B.S.3    Zhang, F.Z.4
  • 35
    • 84896702596 scopus 로고    scopus 로고
    • Design and kinetic analysis of a hybrid promoter-regulator system for malonyl-CoA sensing in Escherichia coli
    • Xu P, Wang WY, Li LY, Bhan N, Zhang FM, Koffas MAG. Design and kinetic analysis of a hybrid promoter-regulator system for malonyl-CoA sensing in Escherichia coli. ACS Chem Biol. 2014;9:451-8.
    • (2014) ACS Chem Biol , vol.9 , pp. 451-458
    • Xu, P.1    Wang, W.Y.2    Li, L.Y.3    Bhan, N.4    Zhang, F.M.5    Koffas, M.A.G.6
  • 36
    • 0035682064 scopus 로고    scopus 로고
    • Conditional replication, integration, excision, and retrieval plasmid-host systems for gene structure-function studies of bacteria
    • Haldimann A, Wanner BL. Conditional replication, integration, excision, and retrieval plasmid-host systems for gene structure-function studies of bacteria. J Bacteriol. 2001;183:6384-93.
    • (2001) J Bacteriol , vol.183 , pp. 6384-6393
    • Haldimann, A.1    Wanner, B.L.2
  • 37
    • 77956247211 scopus 로고    scopus 로고
    • Characterization of the roles of the catalytic domains of Mycobacterium tuberculosis ligase D in Ku-dependent error-prone DNA end joining
    • Wright D, DeBeaux A, Shi RH, Doherty AJ, Harrison L. Characterization of the roles of the catalytic domains of Mycobacterium tuberculosis ligase D in Ku-dependent error-prone DNA end joining. Mutagenesis. 2010;25:473-81.
    • (2010) Mutagenesis , vol.25 , pp. 473-481
    • Wright, D.1    DeBeaux, A.2    Shi, R.H.3    Doherty, A.J.4    Harrison, L.5
  • 38
    • 84935854110 scopus 로고    scopus 로고
    • Design of an ectoine-responsive AraC mutant and its application in metabolic engineering of ectoine biosynthesis
    • Chen W, Zhang S, Jiang P, Yao J, He Y, Chen L, Gui X, Dong Z, Tang SY. Design of an ectoine-responsive AraC mutant and its application in metabolic engineering of ectoine biosynthesis. Metab Eng. 2015;30:149-55.
    • (2015) Metab Eng , vol.30 , pp. 149-155
    • Chen, W.1    Zhang, S.2    Jiang, P.3    Yao, J.4    He, Y.5    Chen, L.6    Gui, X.7    Dong, Z.8    Tang, S.Y.9
  • 41
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko KA, Wanner BL. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA. 2000;97:6640-5.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 42
    • 0028949381 scopus 로고
    • Thermal asymmetric interlaced PCR-automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking
    • Liu YG, Whittier RF. Thermal asymmetric interlaced PCR-automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking. Genomics. 1995;25:674-81.
    • (1995) Genomics , vol.25 , pp. 674-681
    • Liu, Y.G.1    Whittier, R.F.2
  • 44
    • 0032145257 scopus 로고    scopus 로고
    • Assessment of aryl hydrocarbon receptor complex interactions using pBEVY plasmids: expressionvectors with bi-directional promoters for use in Saccharomyces cerevisiae
    • Rd MC, Martinat MA, Hyman LE. Assessment of aryl hydrocarbon receptor complex interactions using pBEVY plasmids: expressionvectors with bi-directional promoters for use in Saccharomyces cerevisiae. Nucleic Acids Res. 1998;26:3577.
    • (1998) Nucleic Acids Res , vol.26 , pp. 3577
    • Rd, M.C.1    Martinat, M.A.2    Hyman, L.E.3


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