메뉴 건너뛰기




Volumn 46, Issue 6, 2017, Pages 983-991.e4

The Transcription Factor T-bet Limits Amplification of Type I IFN Transcriptome and Circuitry in T Helper 1 Cells

Author keywords

ChIP seq; immunoregulation; interferon gamma; JAK STAT pathway; RNA seq; signal transducer and activator of transcription; STAT; T helper cells; T bet; transcription; type I interferons

Indexed keywords

GAMMA INTERFERON; INTERFERON REGULATORY FACTOR 7; STAT1 PROTEIN; STAT2 PROTEIN; TRANSCRIPTION FACTOR T BET; TRANSCRIPTOME; INTERFERON; T BOX TRANSCRIPTION FACTOR; T-BOX TRANSCRIPTION FACTOR TBX21;

EID: 85020642282     PISSN: 10747613     EISSN: 10974180     Source Type: Journal    
DOI: 10.1016/j.immuni.2017.05.005     Document Type: Article
Times cited : (65)

References (45)
  • 5
    • 0028234529 scopus 로고
    • Jak-STAT pathways and transcriptional activation in response to IFNs and other extracellular signaling proteins
    • Darnell, J.E.J. Jr., Kerr, I.M., Stark, G.R., Jak-STAT pathways and transcriptional activation in response to IFNs and other extracellular signaling proteins. Science 264 (1994), 1415–1421.
    • (1994) Science , vol.264 , pp. 1415-1421
    • Darnell, J.E.J.1    Kerr, I.M.2    Stark, G.R.3
  • 6
    • 25444495693 scopus 로고    scopus 로고
    • The yin and yang of type I interferon activity in bacterial infection
    • Decker, T., Müller, M., Stockinger, S., The yin and yang of type I interferon activity in bacterial infection. Nat. Rev. Immunol. 5 (2005), 675–687.
    • (2005) Nat. Rev. Immunol. , vol.5 , pp. 675-687
    • Decker, T.1    Müller, M.2    Stockinger, S.3
  • 7
    • 33846489173 scopus 로고    scopus 로고
    • Transcription factors T-bet and Runx3 cooperate to activate Ifng and silence Il4 in T helper type 1 cells
    • Djuretic, I.M., Levanon, D., Negreanu, V., Groner, Y., Rao, A., Ansel, K.M., Transcription factors T-bet and Runx3 cooperate to activate Ifng and silence Il4 in T helper type 1 cells. Nat. Immunol. 8 (2007), 145–153.
    • (2007) Nat. Immunol. , vol.8 , pp. 145-153
    • Djuretic, I.M.1    Levanon, D.2    Negreanu, V.3    Groner, Y.4    Rao, A.5    Ansel, K.M.6
  • 9
    • 84971523245 scopus 로고    scopus 로고
    • The transcription factors ZEB2 and T-bet cooperate to program cytotoxic T cell terminal differentiation in response to LCMV viral infection
    • Dominguez, C.X., Amezquita, R.A., Guan, T., Marshall, H.D., Joshi, N.S., Kleinstein, S.H., Kaech, S.M., The transcription factors ZEB2 and T-bet cooperate to program cytotoxic T cell terminal differentiation in response to LCMV viral infection. J. Exp. Med. 212 (2015), 2041–2056.
    • (2015) J. Exp. Med. , vol.212 , pp. 2041-2056
    • Dominguez, C.X.1    Amezquita, R.A.2    Guan, T.3    Marshall, H.D.4    Joshi, N.S.5    Kleinstein, S.H.6    Kaech, S.M.7
  • 10
  • 11
    • 33846689706 scopus 로고    scopus 로고
    • Using GOstats to test gene lists for GO term association
    • Falcon, S., Gentleman, R., Using GOstats to test gene lists for GO term association. Bioinformatics 23 (2007), 257–258.
    • (2007) Bioinformatics , vol.23 , pp. 257-258
    • Falcon, S.1    Gentleman, R.2
  • 13
    • 0027382381 scopus 로고
    • Host resistance to Toxoplasma gondii: model for studying the selective induction of cell-mediated immunity by intracellular parasites
    • Gazzinelli, R.T., Denkers, E.Y., Sher, A., Host resistance to Toxoplasma gondii: model for studying the selective induction of cell-mediated immunity by intracellular parasites. Infect. Agents Dis. 2 (1993), 139–149.
    • (1993) Infect. Agents Dis. , vol.2 , pp. 139-149
    • Gazzinelli, R.T.1    Denkers, E.Y.2    Sher, A.3
  • 14
    • 84866086842 scopus 로고    scopus 로고
    • High resolution genome wide binding event finding and motif discovery reveals transcription factor spatial binding constraints
    • Guo, Y., Mahony, S., Gifford, D.K., High resolution genome wide binding event finding and motif discovery reveals transcription factor spatial binding constraints. PLoS Comput. Biol., 8, 2012, e1002638.
    • (2012) PLoS Comput. Biol. , vol.8 , pp. e1002638
    • Guo, Y.1    Mahony, S.2    Gifford, D.K.3
  • 18
    • 33846234336 scopus 로고    scopus 로고
    • Type I interferon gene induction by the interferon regulatory factor family of transcription factors
    • Honda, K., Takaoka, A., Taniguchi, T., Type I interferon gene induction by the interferon regulatory factor family of transcription factors. Immunity 25 (2006), 349–360.
    • (2006) Immunity , vol.25 , pp. 349-360
    • Honda, K.1    Takaoka, A.2    Taniguchi, T.3
  • 20
    • 77955895425 scopus 로고    scopus 로고
    • BigWig and BigBed: enabling browsing of large distributed datasets
    • Kent, W.J., Zweig, A.S., Barber, G., Hinrichs, A.S., Karolchik, D., BigWig and BigBed: enabling browsing of large distributed datasets. Bioinformatics 26 (2010), 2204–2207.
    • (2010) Bioinformatics , vol.26 , pp. 2204-2207
    • Kent, W.J.1    Zweig, A.S.2    Barber, G.3    Hinrichs, A.S.4    Karolchik, D.5
  • 21
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead, B., Trapnell, C., Pop, M., Salzberg, S.L., Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol., 10, 2009, R25.
    • (2009) Genome Biol. , vol.10 , pp. R25
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 24
    • 84978151266 scopus 로고    scopus 로고
    • Differential analysis of RNA-Seq incorporating quantification uncertainty
    • Pimentel, H.J., Bray, N., Puente, S., Melsted, P., Pachter, L., Differential analysis of RNA-Seq incorporating quantification uncertainty. bioRxiv, 2016, 10.1101/058164.
    • (2016) bioRxiv
    • Pimentel, H.J.1    Bray, N.2    Puente, S.3    Melsted, P.4    Pachter, L.5
  • 25
    • 77951770756 scopus 로고    scopus 로고
    • BEDTools: a flexible suite of utilities for comparing genomic features
    • Quinlan, A.R., Hall, I.M., BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 26 (2010), 841–842.
    • (2010) Bioinformatics , vol.26 , pp. 841-842
    • Quinlan, A.R.1    Hall, I.M.2
  • 27
    • 84969754451 scopus 로고    scopus 로고
    • Heterogeneity of Human CD4(+) T Cells Against Microbes
    • Sallusto, F., Heterogeneity of Human CD4(+) T Cells Against Microbes. Annu. Rev. Immunol. 34 (2016), 317–334.
    • (2016) Annu. Rev. Immunol. , vol.34 , pp. 317-334
    • Sallusto, F.1
  • 28
    • 84896987305 scopus 로고    scopus 로고
    • Interferon-stimulated genes: a complex web of host defenses
    • Schneider, W.M., Chevillotte, M.D., Rice, C.M., Interferon-stimulated genes: a complex web of host defenses. Annu. Rev. Immunol. 32 (2014), 513–545.
    • (2014) Annu. Rev. Immunol. , vol.32 , pp. 513-545
    • Schneider, W.M.1    Chevillotte, M.D.2    Rice, C.M.3
  • 32
    • 0034677646 scopus 로고    scopus 로고
    • A novel transcription factor, T-bet, directs Th1 lineage commitment
    • Szabo, S.J., Kim, S.T., Costa, G.L., Zhang, X., Fathman, C.G., Glimcher, L.H., A novel transcription factor, T-bet, directs Th1 lineage commitment. Cell 100 (2000), 655–669.
    • (2000) Cell , vol.100 , pp. 655-669
    • Szabo, S.J.1    Kim, S.T.2    Costa, G.L.3    Zhang, X.4    Fathman, C.G.5    Glimcher, L.H.6
  • 35
    • 84875634162 scopus 로고    scopus 로고
    • Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
    • Thorvaldsdóttir, H., Robinson, J.T., Mesirov, J.P., Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration. Brief. Bioinform. 14 (2013), 178–192.
    • (2013) Brief. Bioinform. , vol.14 , pp. 178-192
    • Thorvaldsdóttir, H.1    Robinson, J.T.2    Mesirov, J.P.3
  • 37
    • 77953917067 scopus 로고    scopus 로고
    • Discrete roles of STAT4 and STAT6 transcription factors in tuning epigenetic modifications and transcription during T helper cell differentiation
    • Wei, L., Vahedi, G., Sun, H.-W., Watford, W.T., Takatori, H., Ramos, H.L., Takahashi, H., Liang, J., Gutierrez-Cruz, G., Zang, C., et al. Discrete roles of STAT4 and STAT6 transcription factors in tuning epigenetic modifications and transcription during T helper cell differentiation. Immunity 32 (2010), 840–851.
    • (2010) Immunity , vol.32 , pp. 840-851
    • Wei, L.1    Vahedi, G.2    Sun, H.-W.3    Watford, W.T.4    Takatori, H.5    Ramos, H.L.6    Takahashi, H.7    Liang, J.8    Gutierrez-Cruz, G.9    Zang, C.10
  • 41
    • 84990988075 scopus 로고    scopus 로고
    • Writ large: Genomic dissection of the effect of cellular environment on immune response
    • Yosef, N., Regev, A., Writ large: Genomic dissection of the effect of cellular environment on immune response. Science 354 (2016), 64–68.
    • (2016) Science , vol.354 , pp. 64-68
    • Yosef, N.1    Regev, A.2
  • 44
    • 77956019250 scopus 로고    scopus 로고
    • Induction and inhibition of type I interferon responses by distinct components of lymphocytic choriomeningitis virus
    • Zhou, S., Cerny, A.M., Zacharia, A., Fitzgerald, K.A., Kurt-Jones, E.A., Finberg, R.W., Induction and inhibition of type I interferon responses by distinct components of lymphocytic choriomeningitis virus. J. Virol. 84 (2010), 9452–9462.
    • (2010) J. Virol. , vol.84 , pp. 9452-9462
    • Zhou, S.1    Cerny, A.M.2    Zacharia, A.3    Fitzgerald, K.A.4    Kurt-Jones, E.A.5    Finberg, R.W.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.