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Volumn 83, Issue 12, 2017, Pages

Experimental evaluation of host adaptation of Lactobacillus reuteri to different vertebrate species

Author keywords

Host adaptation; Lactobacillus reuteri; Probiotics; Symbiosis

Indexed keywords

GENES;

EID: 85019987878     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00132-17     Document Type: Article
Times cited : (75)

References (65)
  • 1
    • 33750003359 scopus 로고    scopus 로고
    • Symbiosis
    • Moran NA. 2006. Symbiosis. Curr Biol 16:R866-R871. https://doi.org/10.1016/j.cub.2006.09.019
    • (2006) Curr Biol , vol.16 , pp. R866-R871
    • Moran, N.A.1
  • 2
    • 0031893151 scopus 로고    scopus 로고
    • Contributions of microbes in vertebrate gastrointestinal tract to production and conservation of nutrients
    • Stevens CE, Huma ID. 1998. Contributions of microbes in vertebrate gastrointestinal tract to production and conservation of nutrients. Physiol Rev 78:393-427
    • (1998) Physiol Rev , vol.78 , pp. 393-427
    • Stevens, C.E.1    Huma, I.D.2
  • 3
    • 35348961403 scopus 로고    scopus 로고
    • An ecological and evolutionary perspective on human-microbe mutualism and disease
    • Dethlefsen L, McFall-Ngai M, Relman DA. 2007. An ecological and evolutionary perspective on human-microbe mutualism and disease. Nature 449:811-818. https://doi.org/10.1038/nature06245
    • (2007) Nature , vol.449 , pp. 811-818
    • Dethlefsen, L.1    McFall-Ngai, M.2    Relman, D.A.3
  • 6
    • 52049092682 scopus 로고    scopus 로고
    • Worlds within worlds: evolution of the vertebrate gut microbiota
    • Ley RE, Lozupone CA, Hamady M, Knight R, Gordon JI. 2008. Worlds within worlds: evolution of the vertebrate gut microbiota. Nat Rev Microbiol 6:776-788. https://doi.org/10.1038/nrmicro1978
    • (2008) Nat Rev Microbiol , vol.6 , pp. 776-788
    • Ley, R.E.1    Lozupone, C.A.2    Hamady, M.3    Knight, R.4    Gordon, J.I.5
  • 7
    • 77954859068 scopus 로고    scopus 로고
    • Why bacteria matter in animal development and evolution
    • Fraune S, Bosch TCG. 2010. Why bacteria matter in animal development and evolution. Bioessays 32:571-580. https://doi.org/10.1002/bies.200900192
    • (2010) Bioessays , vol.32 , pp. 571-580
    • Fraune, S.1    Bosch, T.C.G.2
  • 8
    • 84965133964 scopus 로고    scopus 로고
    • Microbes drive evolution of animals and plants: the hologenome concept
    • Rosenberg E, Zilber-Rosenberg I. 2016. Microbes drive evolution of animals and plants: the hologenome concept. mBio 7:e01395-15. https://doi.org/10.1128/mBio.01395-15
    • (2016) mBio , vol.7
    • Rosenberg, E.1    Zilber-Rosenberg, I.2
  • 9
    • 79952747399 scopus 로고    scopus 로고
    • Host-microbial symbiosis in the vertebrate gastrointestinal tract and the Lactobacillus reuteri paradigm
    • Walter J, Britton RA, Roos S. 2011. Host-microbial symbiosis in the vertebrate gastrointestinal tract and the Lactobacillus reuteri paradigm. Proc Natl Acad Sci U S A 108(Suppl):4645-4652. https://doi.org/10.1073/pnas.1000099107
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 4645-4652
    • Walter, J.1    Britton, R.A.2    Roos, S.3
  • 12
    • 84907984943 scopus 로고    scopus 로고
    • The symbiont side of symbiosis: do microbes really benefit?
    • Garcia JR, Gerardo NM. 2014. The symbiont side of symbiosis: do microbes really benefit? Front Microbiol 5:510. https://doi.org/10.3389/fmicb.2014.00510
    • (2014) Front Microbiol , vol.5 , pp. 510
    • Garcia, J.R.1    Gerardo, N.M.2
  • 13
    • 33746669364 scopus 로고    scopus 로고
    • Molecular interactions between bacterial symbionts and their hosts
    • Dale C, Moran NA. 2006. Molecular interactions between bacterial symbionts and their hosts. Cell 126:453-465. https://doi.org/10.1016/j.cell.2006.07.014
    • (2006) Cell , vol.126 , pp. 453-465
    • Dale, C.1    Moran, N.A.2
  • 14
    • 84905671437 scopus 로고    scopus 로고
    • Genomics and host specialization of honey bee and bumble bee gut symbionts
    • Kwong WK, Engel P, Koch H, Moran NA. 2014. Genomics and host specialization of honey bee and bumble bee gut symbionts. Proc Natl Acad Sci U S A 111:11509-11514. https://doi.org/10.1073/pnas.1405838111
    • (2014) Proc Natl Acad Sci U S A , vol.111 , pp. 11509-11514
    • Kwong, W.K.1    Engel, P.2    Koch, H.3    Moran, N.A.4
  • 15
    • 84855978901 scopus 로고    scopus 로고
    • Phylogeny and fitness of Vibrio fischeri from the light organs of Euprymna scolopes in two Oahu, Hawaii populations
    • Wollenberg MS, Ruby EG. 2012. Phylogeny and fitness of Vibrio fischeri from the light organs of Euprymna scolopes in two Oahu, Hawaii populations. ISME J 6:352-362. https://doi.org/10.1038/ismej.2011.92
    • (2012) ISME J , vol.6 , pp. 352-362
    • Wollenberg, M.S.1    Ruby, E.G.2
  • 16
    • 84964649300 scopus 로고    scopus 로고
    • A genomic comparison of 13 symbiotic Vibrio fischeri isolates from the perspective of their host source and colonization behavior
    • Bongrand C, Koch EJ, Moriano-Gutierrez S, Cordero OX, McFall-Ngai M, Polz MF, Ruby EG. 2016. A genomic comparison of 13 symbiotic Vibrio fischeri isolates from the perspective of their host source and colonization behavior. ISME J 10:2907-2917. https://doi.org/10.1038/ismej.2016.69
    • (2016) ISME J , vol.10 , pp. 2907-2917
    • Bongrand, C.1    Koch, E.J.2    Moriano-Gutierrez, S.3    Cordero, O.X.4    McFall-Ngai, M.5    Polz, M.F.6    Ruby, E.G.7
  • 17
    • 77149149718 scopus 로고    scopus 로고
    • Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution
    • Oh PL, Benson AK, Peterson DA, Patil PB, Moriyama EN, Roos S, Walter J. 2010. Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution. ISME J 4:377-387. https://doi.org/10.1038/ismej.2009.123
    • (2010) ISME J , vol.4 , pp. 377-387
    • Oh, P.L.1    Benson, A.K.2    Peterson, D.A.3    Patil, P.B.4    Moriyama, E.N.5    Roos, S.6    Walter, J.7
  • 20
    • 66049089612 scopus 로고    scopus 로고
    • On the origin of prokaryotic species
    • Doolittle WF, Zhaxybayeva O. 2009. On the origin of prokaryotic species. Genome Res 19:744-756. https://doi.org/10.1101/gr.086645.108
    • (2009) Genome Res , vol.19 , pp. 744-756
    • Doolittle, W.F.1    Zhaxybayeva, O.2
  • 22
    • 0001998540 scopus 로고
    • The lactic microflora of pigs, mice and rats
    • In Wood BJB (ed). The lactic acid bacteria in health and disease. Springer US, Boston, MA
    • Tannock GW. 1992. The lactic microflora of pigs, mice and rats, p 21-48. In Wood BJB (ed), The lactic acid bacteria, vol 1. The lactic acid bacteria in health and disease. Springer US, Boston, MA
    • (1992) The lactic acid bacteria , vol.1 , pp. 21-48
    • Tannock, G.W.1
  • 23
    • 37349053445 scopus 로고    scopus 로고
    • Identification of the most abundant Lactobacillus species in the crop of 1-and 5-weekold broiler chickens
    • Abbas Hilmi HT, Surakka A, Apajalahti J, Saris PEJ. 2007. Identification of the most abundant Lactobacillus species in the crop of 1-and 5-weekold broiler chickens. Appl Environ Microbiol 73:7867-7873. https://doi.org/10.1128/AEM.01128-07
    • (2007) Appl Environ Microbiol , vol.73 , pp. 7867-7873
    • Abbas Hilmi, H.T.1    Surakka, A.2    Apajalahti, J.3    Saris, P.E.J.4
  • 24
    • 0036154330 scopus 로고    scopus 로고
    • Culture-independent analysis of gut bacteria: the pig gastrointestinal tract microbiota revisited
    • Leser TD, Amenuvor JZ, Jensen TK, Lindecrona RH, Boye M, Moller K. 2002. Culture-independent analysis of gut bacteria: the pig gastrointestinal tract microbiota revisited. Appl Environ Microbiol 68:673-690. https://doi.org/10.1128/AEM.68.2.673-690.2002
    • (2002) Appl Environ Microbiol , vol.68 , pp. 673-690
    • Leser, T.D.1    Amenuvor, J.Z.2    Jensen, T.K.3    Lindecrona, R.H.4    Boye, M.5    Moller, K.6
  • 25
    • 84870999292 scopus 로고    scopus 로고
    • Intestinal colonization resistance
    • Lawley TD, Walker AW. 2013. Intestinal colonization resistance. Immunology 138:1-11. https://doi.org/10.1111/j.1365-2567.2012.03616.x
    • (2013) Immunology , vol.138 , pp. 1-11
    • Lawley, T.D.1    Walker, A.W.2
  • 26
    • 84892735932 scopus 로고    scopus 로고
    • Comparison of the colonization ability of autochthonous and allochthonous strains of lactobacilli in the human gastrointestinal tract
    • Frese SA, Hutkins RW, Walter J. 2012. Comparison of the colonization ability of autochthonous and allochthonous strains of lactobacilli in the human gastrointestinal tract. Adv Microbiol 2:399-409. https://doi.org/10.4236/aim.2012.23051
    • (2012) Adv Microbiol , vol.2 , pp. 399-409
    • Frese, S.A.1    Hutkins, R.W.2    Walter, J.3
  • 27
    • 84920029204 scopus 로고    scopus 로고
    • Quantitative evaluation of synbiotic strategies to improve persistence and metabolic activity of Lactobacillus reuteri DSM 17938 in the human gastrointestinal tract
    • Rattanaprasert M, Roos S, Hutkins RW, Walter J. 2014. Quantitative evaluation of synbiotic strategies to improve persistence and metabolic activity of Lactobacillus reuteri DSM 17938 in the human gastrointestinal tract. J Funct Foods 10:85-94. https://doi.org/10.1016/j.jff.2014.05.017
    • (2014) J Funct Foods , vol.10 , pp. 85-94
    • Rattanaprasert, M.1    Roos, S.2    Hutkins, R.W.3    Walter, J.4
  • 28
    • 33751245559 scopus 로고    scopus 로고
    • Proteins with GGDEF and EAL domains regulate Pseudomonas putida biofilm formation and dispersal
    • Gjermansen M, Ragas P, Tolker-Nielsen T. 2006. Proteins with GGDEF and EAL domains regulate Pseudomonas putida biofilm formation and dispersal. FEMS Microbiol Lett 265:215-224. https://doi.org/10.1111/j.1574-6968.2006.00493.x
    • (2006) FEMS Microbiol Lett , vol.265 , pp. 215-224
    • Gjermansen, M.1    Ragas, P.2    Tolker-Nielsen, T.3
  • 29
    • 54449092724 scopus 로고    scopus 로고
    • Removal of antibiotic resistance gene-carrying plasmids from Lactobacillus reuteri ATCC 55730 and characterization of the resulting daughter strain. reuteri DSM 17938
    • Rosander A, Connolly E, Roos S. 2008. Removal of antibiotic resistance gene-carrying plasmids from Lactobacillus reuteri ATCC 55730 and characterization of the resulting daughter strain, L. reuteri DSM 17938. Appl Environ Microbiol 74:6032-6040. https://doi.org/10.1128/AEM.00991-08
    • (2008) Appl Environ Microbiol , vol.74 , pp. 6032-6040
    • Rosander, A.1    Connolly, E.2    Roos, S.3
  • 30
    • 84944452372 scopus 로고    scopus 로고
    • Evolution of host specialization in gut microbes: the bee gut as a model
    • Kwong WK, Moran NA. 2015. Evolution of host specialization in gut microbes: the bee gut as a model. Gut Microbes 6:214-220. https://doi.org/10.1080/19490976.2015.1047129
    • (2015) Gut Microbes , vol.6 , pp. 214-220
    • Kwong, W.K.1    Moran, N.A.2
  • 32
    • 84953308141 scopus 로고    scopus 로고
    • The hologenome concept: helpful or hollow?
    • Moran NA, Sloan DB. 2015. The hologenome concept: helpful or hollow? PLoS Biol 13:e1002311. https://doi.org/10.1371/journal.pbio.1002311
    • (2015) PLoS Biol , vol.13
    • Moran, N.A.1    Sloan, D.B.2
  • 33
    • 62249192807 scopus 로고    scopus 로고
    • A single regulatory gene is sufficient to alter bacterial host range
    • Mandel MJ, Wollenberg MS, Stabb EV, Visick KL, Ruby EG. 2009. A single regulatory gene is sufficient to alter bacterial host range. Nature 458: 215-218. https://doi.org/10.1038/nature07660
    • (2009) Nature , vol.458 , pp. 215-218
    • Mandel, M.J.1    Wollenberg, M.S.2    Stabb, E.V.3    Visick, K.L.4    Ruby, E.G.5
  • 35
    • 84884671126 scopus 로고    scopus 로고
    • Assessment of bacterial diversity in breast milk using culture-dependent and cultureindependent approaches
    • Jost T, Lacroix C, Braegger C, Chassard C. 2013. Assessment of bacterial diversity in breast milk using culture-dependent and cultureindependent approaches. Br J Nutr 110:1253-1262. https://doi.org/10.1017/S0007114513000597
    • (2013) Br J Nutr , vol.110 , pp. 1253-1262
    • Jost, T.1    Lacroix, C.2    Braegger, C.3    Chassard, C.4
  • 36
    • 84874275084 scopus 로고    scopus 로고
    • Attribution of foodborne illnesses, hospitalizations, and deaths to food commodities by using outbreak data, United States, 1998-2008
    • Painter JA, Hoekstra RM, Ayers T, Tauxe RV, Braden CR, Angulo FJ, Griffin PM. 2013. Attribution of foodborne illnesses, hospitalizations, and deaths to food commodities by using outbreak data, United States, 1998-2008. Emerg Infect Dis 19:407-415. https://doi.org/10.3201/eid1903.111866
    • (2013) Emerg Infect Dis , vol.19 , pp. 407-415
    • Painter, J.A.1    Hoekstra, R.M.2    Ayers, T.3    Tauxe, R.V.4    Braden, C.R.5    Angulo, F.J.6    Griffin, P.M.7
  • 37
    • 84856652357 scopus 로고    scopus 로고
    • Insights from genomic comparisons of genetically monomorphic bacterial pathogens
    • Achtman M. 2012. Insights from genomic comparisons of genetically monomorphic bacterial pathogens. Philos Trans R Soc B Biol Sci 367: 860-867. https://doi.org/10.1098/rstb.2011.0303
    • (2012) Philos Trans R Soc B Biol Sci , vol.367 , pp. 860-867
    • Achtman, M.1
  • 38
    • 0033598784 scopus 로고    scopus 로고
    • Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis
    • Achtman M, Zurth K, Morelli G, Torrea G, Guiyoule A, Carniel E. 1999. Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis. Proc Natl Acad Sci U S A 96:14043-14048. https://doi.org/10.1073/pnas.96.24.14043
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 14043-14048
    • Achtman, M.1    Zurth, K.2    Morelli, G.3    Torrea, G.4    Guiyoule, A.5    Carniel, E.6
  • 39
    • 33748155285 scopus 로고    scopus 로고
    • Bacterial glycans: key mediators of diverse host immune responses
    • Comstock LE, Kasper DL. 2006. Bacterial glycans: key mediators of diverse host immune responses. Cell 126:847-850. https://doi.org/10.1016/j.cell.2006.08.021
    • (2006) Cell , vol.126 , pp. 847-850
    • Comstock, L.E.1    Kasper, D.L.2
  • 40
    • 84885019160 scopus 로고    scopus 로고
    • Structure, biosynthesis, and function of bacterial capsular polysaccharides synthesized by ABC transporterdependent pathways
    • Willis LM, Whitfield C. 2013. Structure, biosynthesis, and function of bacterial capsular polysaccharides synthesized by ABC transporterdependent pathways. Carbohydr Res 378:35-44. https://doi.org/10.1016/j.carres.2013.05.007
    • (2013) Carbohydr Res , vol.378 , pp. 35-44
    • Willis, L.M.1    Whitfield, C.2
  • 41
    • 84880437408 scopus 로고    scopus 로고
    • Lactobacillus paracasei comparative genomics: towards species pan-genome definition and exploitation of diversity
    • Smokvina T, Wels M, Polka J, Chervaux C, Brisse S, Boekhorst J, Vlieg JET van, Siezen HRJ. 2013. Lactobacillus paracasei comparative genomics: towards species pan-genome definition and exploitation of diversity. PLoS One 8:e68731. https://doi.org/10.1371/journal.pone.0068731
    • (2013) PLoS One , vol.8
    • Smokvina, T.1    Wels, M.2    Polka, J.3    Chervaux, C.4    Brisse, S.5    Boekhorst, J.6    van Vlieg, J.E.T.7    Siezen, H.R.J.8
  • 45
    • 0035156787 scopus 로고    scopus 로고
    • The Lactobacillus and Bifidobacterium microflora of the human intestine: composition and succession
    • Reuter G. 2001. The Lactobacillus and Bifidobacterium microflora of the human intestine: composition and succession. Curr Issues Intest Microbiol 2:43-53
    • (2001) Curr Issues Intest Microbiol , vol.2 , pp. 43-53
    • Reuter, G.1
  • 46
    • 50049098340 scopus 로고    scopus 로고
    • Ecological role of lactobacilli in the gastrointestinal tract: implications for fundamental and biomedical research
    • Walter J. 2008. Ecological role of lactobacilli in the gastrointestinal tract: implications for fundamental and biomedical research. Appl Environ Microbiol 74:4985-4996. https://doi.org/10.1128/AEM.00753-08
    • (2008) Appl Environ Microbiol , vol.74 , pp. 4985-4996
    • Walter, J.1
  • 47
    • 84880471652 scopus 로고    scopus 로고
    • Long-term temporal analysis of the human fecal microbiota revealed a stable core of dominant bacterial species
    • Martínez I, Muller CE, Walter J. 2013. Long-term temporal analysis of the human fecal microbiota revealed a stable core of dominant bacterial species. PLoS One 8:e69621. https://doi.org/10.1371/journal.pone.0069621
    • (2013) PLoS One , vol.8
    • Martínez, I.1    Muller, C.E.2    Walter, J.3
  • 49
    • 70449703996 scopus 로고    scopus 로고
    • What are the consequences of the disappearing human microbiota?
    • Blaser MJ, Falkow S. 2009. What are the consequences of the disappearing human microbiota? Nat Rev Microbiol 7:887-894. https://doi.org/10.1038/nrmicro2245
    • (2009) Nat Rev Microbiol , vol.7 , pp. 887-894
    • Blaser, M.J.1    Falkow, S.2
  • 50
    • 84928587108 scopus 로고    scopus 로고
    • The gut microbiota of rural Papua New Guineans: composition, diversity patterns, and ecological processes
    • Martínez I, Stegen JC, Maldonado-Gómez MX, Eren AM, Siba PM, Greenhill AR, Walter J. 2015. The gut microbiota of rural Papua New Guineans: composition, diversity patterns, and ecological processes. Cell Rep 11: 527-538. https://doi.org/10.1016/j.celrep.2015.03.049
    • (2015) Cell Rep , vol.11 , pp. 527-538
    • Martínez, I.1    Stegen, J.C.2    Maldonado-Gómez, M.X.3    Eren, A.M.4    Siba, P.M.5    Greenhill, A.R.6    Walter, J.7
  • 51
    • 84956600958 scopus 로고    scopus 로고
    • Diet shapes the gut microbiome of pigs during nursing and weaning
    • Frese SA, Parker K, Calvert CC, Mills DA. 2015. Diet shapes the gut microbiome of pigs during nursing and weaning. Microbiome 3:28. https://doi.org/10.1186/s40168-015-0091-8
    • (2015) Microbiome , vol.3 , pp. 28
    • Frese, S.A.1    Parker, K.2    Calvert, C.C.3    Mills, D.A.4
  • 54
    • 76949136058 scopus 로고
    • A selective medium for the isolation and enumeration of oral and fecal lactobacilli
    • Rogosa M, Mitchell JA, Wiseman RF. 1951. A selective medium for the isolation and enumeration of oral and fecal lactobacilli. J Bacteriol 62:132-133
    • (1951) J Bacteriol , vol.62 , pp. 132-133
    • Rogosa, M.1    Mitchell, J.A.2    Wiseman, R.F.3
  • 56
    • 0018025181 scopus 로고
    • Gnotobiotic pigs: derivation and rearing
    • Miniats OP, Jol D. 1978. Gnotobiotic pigs: derivation and rearing. Can J Comp Med Rev 42:428-437
    • (1978) Can J Comp Med Rev , vol.42 , pp. 428-437
    • Miniats, O.P.1    Jol, D.2
  • 57
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall T. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95-98
    • (1999) Nucleic Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.1
  • 60
    • 84979250492 scopus 로고    scopus 로고
    • EDGAR 2.0: an enhanced software platform for comparative gene content analyses
    • Blom J, Kreis J, Spänig S, Juhre T, Bertelli C, Ernst C, Goesmann A. 2016. EDGAR 2.0: an enhanced software platform for comparative gene content analyses. Nucleic Acids Res 44:W22-W28. https://doi.org/10.1093/nar/gkw255
    • (2016) Nucleic Acids Res , vol.44 , pp. W22-W28
    • Blom, J.1    Kreis, J.2    Spänig, S.3    Juhre, T.4    Bertelli, C.5    Ernst, C.6    Goesmann, A.7
  • 62
    • 77956193448 scopus 로고    scopus 로고
    • progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement
    • Darling AE, Mau B, Perna NT. 2010. progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement. PLoS One 5:e11147. https://doi.org/10.1371/journal.pone.0011147
    • (2010) PLoS One , vol.5
    • Darling, A.E.1    Mau, B.2    Perna, N.T.3
  • 64
    • 79960639613 scopus 로고    scopus 로고
    • Evolutioanry transitions in bacterial symbiosis
    • Sachs J, Skophammer R, Regus J. 2011. Evolutioanry transitions in bacterial symbiosis. Proc Natl Acad Sci U S A 108:10800-10807. https://doi.org/10.1073/pnas.1100304108
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 10800-10807
    • Sachs, J.1    Skophammer, R.2    Regus, J.3


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